Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03033 ATGTACCATCATCACCAACACCAACACCAACACCAAGGAAAAAACATCCACTCTTCTTCCAGAATGCCAATCCCCTCTGAGAGGCACATGTTCCTTCAAACAGGAAATGGATCTGGTGATTCTGGGCTTGTGCTTTCAACTGATGCTAAGCCTAGATTGAAATGGACACCAGATCTTCATGCCAGGTTTATAGAAGCAGTCAATCAATTAGGGGGAGCTGACAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGAATTCCAGGGCTTACCTTGTATCATCTAAAGAGTCATCTTCAGAAGTATAGATTGAGCAAGAATCTGCACGGACAAAGCAACAACGTGACACACAAACTAACACCAAATACAGGTGCAGCAACTGGAGAGAGACTTTCTGAAACCAATGGAACTCACATGAACAAATTAAGCCTTGGACCACAGGCTAACAAAGATTTACATATAAGCGAGGCACTGCAGATGCAGATTGAGGTGCAGAGAAGGCTCAATGAACAACTTGAGGTGCAAAGGCACTTGCAGCTTAGGATAGAGGCCCAAGGAAAATACCTTCAGTCTGTTTTGGAGAAAGCTCAGGAGACTCTTGGGAGACAAAATTTGGGAATAGTAGGACTTGAAGCTGCCAAAGTTCAACTCTCAGAGCTGGTGTCCAAAGTCTCATCTCAGTGCCTTAACTCAGCATTCTCAGAGCTGAAGGAGTTGCAAGGATTTTGCCCTCAGCGAATACAAACTAACCAGCCTAACGATTGCTCAATGGACAGTTGTCTCACATCCTGTGACAGATCACAAAAGGAGCAAGAGATTCAAAATGGCTTAAGACACTTCAACAACCGTGTATTCATGGAACAAAAGGAAGCCACAGAAGCTCCCAACAACCTTAGGAACTCGGAACTCAAGTGGTGCGAAGATGGGAAAAAGAACACCTTCCTTGCCCCATTGAGCAAGAATGAAGAAACAAGAAACCATGCTTCTGAATGCAGTCCCAGCAACTTATCCATGTCCATCGGACTTGAAAGAGAAACAGAAAACGGAAGTAGCTTGTATCCTGAGAGACTGATCACAGAGAGCCAATCAGATGGAGAGTTTCAGCACAGGAACAGAATCAAGACAGAAACAATGAAACCAGTGGATGAAAAAGTTTCTCAAAATTATAGGTTGCCAGCTTCTTACTTTGCAGCAGCAAGATTGGACCTAAACAGTCATGGAGATATTGAAGGCGCAACCACTTGTAAACAACTGGACTTGAATAGATTCAGTTGGAGCTGA 1281 0.4372 MYHHHQHQHQHQGKNIHSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNVTHKLTPNTGAATGERLSETNGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQRIQTNQPNDCSMDSCLTSCDRSQKEQEIQNGLRHFNNRVFMEQKEATEAPNNLRNSELKWCEDGKKNTFLAPLSKNEETRNHASECSPSNLSMSIGLERETENGSSLYPERLITESQSDGEFQHRNRIKTETMKPVDEKVSQNYRLPASYFAAARLDLNSHGDIEGATTCKQLDLNRFSWS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03033 426 Coils Coil 155 175 - -
Pste3g03033 426 Pfam MYB-CC type transfactor, LHEQLE motif 153 199 IPR025756 -
Pste3g03033 426 FunFam Myb family transcription factor 49 107 - -
Pste3g03033 426 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g03033 426 Pfam Myb-like DNA-binding domain 52 103 IPR001005 -
Pste3g03033 426 SUPERFAMILY Homeodomain-like 49 105 IPR009057 -
Pste3g03033 426 Gene3D - 49 107 - -
Pste3g03033 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 107 IPR017930 -
Pste3g03033 426 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 305 IPR044848 GO:0003700
Pste3g03033 426 MobiDBLite consensus disorder prediction 112 131 - -
Pste3g03033 426 NCBIfam myb-like DNA-binding domain, SHAQKYF class 50 105 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03033 Pste-Chr3 23119875 23122387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03033 82 425 G2-like Transcription Factor Family AT3G04030 50.427 3.22e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste3g03033 Myb_DNA-binding 3.8e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03033 3 23119875 23122387 Pste1g02902 1 12451922 12454912 PCT