Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03029 ATGCAATGCCGTTTCCCGTTGATAACTGCTGTGGATTCTGTGTGTAAGCTTCAGAGTGATGCTCTAAGGGAAGCTATCTCAGGAATCATGACTGATTCTAAGGAGAAAAACCGTAAATTTGTGGAGACCATTGAGCTCCAAATTGGGCTGAAAAACTATGATCCTCAGAAAGATAAGCGTTTTAGCGGCTCTGTTAAGTTGCCTCATATTCCTCGCCCCAAGATGAAAATTTGTATGCTTGGAGATGCCCAGCACGTTGAGGAGGCTGAGAAGATAGGATTGGACTACATGGATGTAGAGGCTTTGAAGAAGCTTAACAAAAATAAGAAGTTGGTGAAAAAATTAGCCAAGAAATATCATGCCTTTTTGGCTTCTGAAGCTGTTATTAAGCAGATTCCTCGGCTCTTGGGACCGGGGAAGTTCCCTACCCTTGTGACGCATCAAGAATCCCTCGAGTCAAAGGTTAATGAGACCAAAGCTATGGTAAAATTCCAGCTTAAGAAGGTGCTCTGCATGGGAGTTGCCGTGGGGAATGTTAGCATGGAGGAAAAACAAATATTCCAAAATGTACAACTGAGCGTGAACTTCCTTGTCTCATTGCTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTATCTGAAGAGTACCATGGGGAAATCTTACCGTGTGTTTTGAGTTGCTGTTCTTAATAGGGTCGTCAATTCCTTCAGTGAATTTATGATCACATTTCATATATTTTCTTGATAGGTGGACAGAATTTTTCATCATTCTACAGTTTTGTTGGATGAGTATTTTTTGGTTAGTATTTCTTGTTATGACATGTTATGTTTCAAGTGCTTTGGAATGTCGGATAATTTTAGGGGTGCCAAGTTTAAGCTGCCCGTGTTTTTACGTATTTCAACTTTTTCTATACCCTTTTATATCACATGTCCTATATCTCTATGAGGGAACAACTTCGTGTTTGGGGATTGCATCAGGCAGTCAGACCCAGTTGTTTTGAAGTTAGAATTAATTTTAAATCATTAAATGAAATTAGGACAGTTCTTTATTAAATTATATACTTGACACTAGAATATTTTGTATTAGGAGAAACTCAAGCTTTTTATTTCGAAACGGC 1117 0.3894 MQCRFPLITAVDSVCKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03029 224 FunFam Ribosomal protein L10a 14 132 - -
Pste3g03029 224 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 24 218 - -
Pste3g03029 224 SUPERFAMILY Ribosomal protein L1 17 224 IPR023674 -
Pste3g03029 224 CDD Ribosomal_L1 22 223 IPR028364 -
Pste3g03029 224 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 10 224 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Pste3g03029 224 FunFam Ribosomal protein 145 222 - -
Pste3g03029 224 Gene3D - 144 222 - -
Pste3g03029 224 Gene3D - 14 132 - -
Pste3g03029 224 Pfam Ribosomal protein L1p/L10e family 35 218 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03029 Pste-Chr3 23084917 23087092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03029 14 224 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 85.648 9.48e-121 340
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03029 3 23084917 23087092 Pste3g03029 3 23084917 23087092 ECH