Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03004 GTAGTAGACCAGCTGTGACTGTCGGCGTATGCTATTTCTTTCTCTCTCTAGACTTCTCTTCGTAGAGAGAGAAACCGCCTAACTGTTTCTTCTTCTTCATGATCTTCGCCATATGAAAAAGTAACCTCATCATTGCAATTTCTGCACAAGATAATTAATTACACTGCGTAATTGACATTATTGCTATTATTACTGCATTGTGAGAGTGTGACAGAGAGAATTGAGTGTGGTCGAAACACTACATTGATTGCGGAGACAAGTCAGGGATGAGAAGTTTCTGAAAACGTTAACCTCCAGCGTGATTCCGTTGCGGAAGCAATGTAGAAACGGTTTCGGCGTGGTCGCCGGAGTTCGCTGGGTGAATTTCGTTTAGAGTGAAATCAGTTTGTTACAATTGGATCGAGAGTGCGATGGAGTCGCGGATGGATCACTACGAGATCATGGAGCAGATCGGTCGCGGAGCGTTTGGCGCTGCAATTCTCGTAAACCACAAAGCGGAGAAGAAGAAGTACGTGTTGAAGAAAATCAGGCTCGCGCGGCAGACTGAACGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCTCGAATTCAACATCCTTACATCGTGGAATTCAAAGAGGCTTGGGTTGAGAAGGGTTGCTATGTTTGCATTGTTACTGGATACTGTGAAGGTGGAGACATGGCCGCTTTGATGAAAAAATCTAATGGGGTTTACTTTCCTGAAGAGAAACTCTGCAAGTGGTTTACTCAACTACTTTTGGCTGTGGAATACCTGCATTCAAATTTTGTTTTACATCGCGACCTAAAGTGTTCCAACATCTTTCTTACCAAGGATCAGGATGTTCGCTTAGGGGATTTTGGGCTTGCTAAGACACTAAAAGCGGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAACTATATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATTCAAATCTGATATCTGGTCACTAGGTTGTTGTATATATGAGATGGCTGCTCATCGCCCGGCTTTTAAAGCTTTTGATATGGCAGGGTTGATAAGCAAGATAAACCGTTCCTCTATTGGCCCTTTGCCTCCTTGTTATTCTCCATCTTTGAAAACACTGATAAAGGGCATGCTGAGAAAAAATCCTGAGCATCGTCCTACAGCATCTGAAATCTTAAAGCACCCTTATTTGCTACCTTATGTTGACCATTATCGTTCATCTTTATTTACTCCAACAGCCAGTTCTCCTCAAAAGCCACTTTCTGTTGTTCCTGATCCTCGAAAAAGTAAGCCAGAAAGTCAAAACAGTAGTAGTTCAAGTACTGAGAAAGATAGTTTGATGTCAAATGAGAAAAACACTGAAAAAGATGTGCAGAAGTGTGATAGGAAAACCACTGAAGTAGAACTGGTATCAATTGAGAATGATGGCTCTGATAAACTCCTGCCTGGTGAAGAAGGAAATGGCTCCAGCAAAGTCAATGCCAAAACAGATGAGGAGGAAGTGACAAAGCGATCTAATGAACACCATTCTAATGTTGTATCTAAGCAACCAAAAACAATTAAGAATGTAGTGACAGCATTAAAAAATGGAAGGCCTAGAGAGACAAGTTCTCCAATAAGATGCAATCGCATAAAGGGTGGTGGTGTGTTGACACATAAAATAAATACAGAGACATCGTCCAAATTGCCCAAACCCAATTTTGGTACTTATGATTTGAAGCCTAACTTAGAGGTGCCAAATATTTTACCTTCAAAAGCAATTCCTGATTCTGCAAAAAGAATGCAAGTATCACATACTTCAAAGCATCAGCTACCAATGATAGAATCCACCCCAAAAACTAAACCTCGACATAATGCGATTCCACCATCTGGTCCTGCCAAACAAGTAGAAGGACGTGAAGTTCCTGCCAAGCCATGGCAAAAGACTCCTCCAAGTTTTCTTAAACCACCTTCTTTTCCAGGACATTTGAGGCAGGTTGGGTTTGATGTTCCAAATGCAGCAAATAATACTGGAAAGTCTAGTCCAAATAAAATGGTTCGGGATCCTAAGATGTGCCATCATCTGTTGACCAACAGTCATATACCACATGTTTCTAGAGAGAAGAAAGAGCCTTTGAAGCCTTTTGAAACCAGTTCAAAAGGAATGCAAACAGACAGCAGTAATTCTGTCTCATCTTCATTCTCTATTCAAGGTTTTGAACTTTCTGATTTTGCAACTACTTTTATTGACTTAAGTGAACCAACACTTCCCGACCATGAGATTTTAAACCATACTGAAAATTTGGTTTCACGACCAGATAGCAGTTCACCTGCATCCTGTTTTCATTTTGAGATGTCTGAACAGTTGCCTGTGGAAACCCCTGTCGCTACACCACATTCTCAGAATATAACTACTAGTAATGAGAAGGTAAGTCCGAGTTTAACCCTTGATCATTCGGTTCAAGATGCTGAAGTAATGTTTACTTCTGATGATAGTTTTCCCATAAATCAGAGGACTACATCTTCTAGCTCCAGGTGTGATAATAGATCTGTAGATCCCTCTGCTGTAATCTCAGAAGAAATCAGAGACATTCGAGATATTTCTAACGAAATGTCTTTGACCAAGTCTCTCCGACAGTCACTCCCCATTTCTGGAGAAAAGTCTGTATGTGAAGAAATTAATCCAGCAAGCAAGCCAAATAACAGTCTTGAAAAAGCTAGCCAGCCAAAAGTTATGTGCATCTCCACTGGTGATGACAAATTCATGGTGAGGGAAAGACTGTCATCAATGGATGAAACTACTCCTTTGATTATCTCTACTAAAATATCAAGCCAGAAAGTTTTGCAAGAAGAGAAAGGAACAGTTTTACAGAATTCAGCATCGGAAAGGTCAGCTGTTAGCCATCTTCCTCCAGCTTTTGAGGATGTCATTCATGTCATCCGCCACAGCAGTTACCGTGTGGGGACTGAGCAGCCAGTGAAGGAATCTGTGGACATGGGGGTTCAAAATGTAGATGTTGGTAAATTTTTCAACATTGTAAGGGATGATTTAGAAATGAGAAACGTGAGCACTCCTTTGACCCTAAAATCTTCTAATTCCTCTGAAGCTATTGGCTTGAAGAGTAATGTTTCTGATAATATGGAAATCAGAAACTTGAGTAGTCCTCCTAACTTAAAATCTTCAAATTGTTCTGATTCCTTGAGCGTGAAATCAAGCTTTTCTGATCATTCTGGTGTTAGGGAACAAGATGTGAAAAATCCCGATTCACCTGTTTCAAAATCTGATTCGTCTGAGTATACCAAGCATAACACTCCTACTACTGCTGATCAGGAAACACCGGCAAAGGAAATTTTGGATGTTAAATCTTCCAGGCAGAGAGCTGAGGCACTTGAAGGACTGTTAGAATTATCTGCAAACTTGCTGCAGCAAAATAGATTGGAGGAACTTGCAGTTGTTCTGAAGCCCTTTGGAAAAGATAAAGTCTCCCCAAGGGAGACAGCTATTTGGTTAGCCAAGAGTCTAAAAGGATTGATGATTGAGGAAGGTGGGGGACGCAGTTAA 3545 0.4107 MESRMDHYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAALMKKSNGVYFPEEKLCKWFTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKTLIKGMLRKNPEHRPTASEILKHPYLLPYVDHYRSSLFTPTASSPQKPLSVVPDPRKSKPESQNSSSSSTEKDSLMSNEKNTEKDVQKCDRKTTEVELVSIENDGSDKLLPGEEGNGSSKVNAKTDEEEVTKRSNEHHSNVVSKQPKTIKNVVTALKNGRPRETSSPIRCNRIKGGGVLTHKINTETSSKLPKPNFGTYDLKPNLEVPNILPSKAIPDSAKRMQVSHTSKHQLPMIESTPKTKPRHNAIPPSGPAKQVEGREVPAKPWQKTPPSFLKPPSFPGHLRQVGFDVPNAANNTGKSSPNKMVRDPKMCHHLLTNSHIPHVSREKKEPLKPFETSSKGMQTDSSNSVSSSFSIQGFELSDFATTFIDLSEPTLPDHEILNHTENLVSRPDSSSPASCFHFEMSEQLPVETPVATPHSQNITTSNEKVSPSLTLDHSVQDAEVMFTSDDSFPINQRTTSSSSRCDNRSVDPSAVISEEIRDIRDISNEMSLTKSLRQSLPISGEKSVCEEINPASKPNNSLEKASQPKVMCISTGDDKFMVRERLSSMDETTPLIISTKISSQKVLQEEKGTVLQNSASERSAVSHLPPAFEDVIHVIRHSSYRVGTEQPVKESVDMGVQNVDVGKFFNIVRDDLEMRNVSTPLTLKSSNSSEAIGLKSNVSDNMEIRNLSSPPNLKSSNCSDSLSVKSSFSDHSGVREQDVKNPDSPVSKSDSSEYTKHNTPTTADQETPAKEILDVKSSRQRAEALEGLLELSANLLQQNRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGLMIEEGGGRS 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03004 1044 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 993 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 690 709 - -
Pste3g03004 1044 SUPERFAMILY Protein kinase-like (PK-like) 4 308 IPR011009 -
Pste3g03004 1044 Gene3D Transferase(Phosphotransferase) domain 1 90 340 - -
Pste3g03004 1044 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Pste3g03004 1044 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Pste3g03004 1044 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03004 1044 MobiDBLite consensus disorder prediction 905 933 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 275 381 - -
Pste3g03004 1044 FunFam Serine/threonine-protein kinase Nek5 90 335 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 356 376 - -
Pste3g03004 1044 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03004 1044 MobiDBLite consensus disorder prediction 947 969 - -
Pste3g03004 1044 CDD STKc_Nek 7 262 - -
Pste3g03004 1044 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03004 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pste3g03004 1044 MobiDBLite consensus disorder prediction 473 495 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 293 311 - -
Pste3g03004 1044 FunFam Serine/threonine-protein kinase Nek2 5 87 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 560 587 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 312 338 - -
Pste3g03004 1044 MobiDBLite consensus disorder prediction 905 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03004 Pste-Chr3 22844405 22852117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03004 14 262 MAP Kinase Kinase Kinase AT1G53570 31.890 4.11e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pste3g03004 Pkinase 1.1e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03004 3 22844405 22852117 Pste3g03004 3 22844405 22852117 ECH
Pste3g03004 3 22844405 22852117 Pste1g02963 1 12954298 12960923 PCT