Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02999 GCTAATCATGGAACGTTTTCAGATACAAGTCGTCATCTTGTTTTGTTTTGGTCTGATAAATACAATGAGTTATGGTGCTACAAACCCAAATGATGCCAAAGTTTTGAATGATTTCAGAAAAGGATTGGATAATCCAGAGCTTTTGAAGTGGCCAGAGGATGGAGATGATCCCTGTGGTCCTCCTTCATGGCCTTTTGTGTACTGTACTGGAGATAGAGTAAATCAGATTCAGGCTAAGAATCTTGGTCTTAGAGGGTCATTGCCTCAGAACTTTAACCAACTCTCAGAACTCTACAATTTAGGTCTCCAACGCAACAACCTTAGTGGGATGCTGCCTACTTTTAGTGGATTATCCAAATTGGAATTTGCTTTCTTGGACTATAATGCATTTGATGTAATCCCTGCTGATTTCTTTAATGGACTTATCAGCCTTAGGGTCTTGTCTTTGGAAGAAAATCCACTAAATGTAAGTAGTGGCTGGTCTTTTCCCATGGATTTAGAAAAATCTGAGCAATTAACTAATCTTTCTTTGGTGCATTGTAATTTGGTTGGGCCATTGCCGGATTTTCTGGGCACATTGCCATCCCTTACAAATCTGAGGCTTTCAGGCAACAAGCTCTCTGGTGCCATTCCAGCTACTTTTGCTCAATCTTCAATCCAGGTTTTGTGGTTGAATAATCAAGAAGGTGGTGGGATGAGTGGTCCTATTGATGTTTGGCTACATGGCAACCAGTTCACTGGGCCAATTCCTCAGAATATTGGAAACCTCACCTCCTTGCAGGAACTCAATCTCAATAGTAATCAACTTGTTGGCTTGATACCAGAGTCCCTAGCACACATGAACCTTCAGATCCTAGTGTTAAATAATAACATGCTAATGGGTCCAATACCAGAATTTAAGGCTGTCAATGTTTCTTGTGATGACAATTTATTTTGTCAACCTAAGCCTGGTGAATGTTCCCCTCAAGTTACTGTCCTGCTGGATTTTCTTGATAAGCTGAATTACCCTTCATTTCTCATTTCTGATTGGTCTGGCAACGAACCTTGCACACGAAGCACGGGGACATGGTTTGGATTAAGCTGCCATCCCAACTCAGAGGTATCTATTATCAATCTACCTAGACACAAGTTAAACGGTACTTTAAGCCCATCACTTGCCAAGTTAGATTCCCTCCTTGAAATTAGGCTTGCAGGAAACAATATAACCGGCTCAATTCCCAGTAATTTTACTAACTTTAAATCTTTGAGGTTGTTGGACTTAAGTGATAACAACCTTGAGCCTCCATTACCTGATTTTCGTAATGATATGAAGGTTTTTACAGCGGGTAACCCTCTTTTTCCTAATCAAACTGGAGGAAGTCCTAGTCCTATGCCTATTAACAGCCCACCTTCACCACAGGATCCATCACATCCTCCATCCTCTCATGAGCCACTTGTTCCAAATCAGAGTTCAATATCAAATCAATCCAAACCAAATGACTTCAAAAGATTAAAAACAGTAGCAATAGTGGCTGGTGTTGCAGTGTTTGCATTTATAGCTCTTTTGGTTATTTATCTCTACCTATGCTGCAGGAAGAACAAAAAATGCTCCGTGGATGCTCCAAGTTCCATTGTGGTTCACCCTCGTGATCCATCTGATCCAGATAACATGGTTAAAATTGCTGTTTCAAATGCCACTGGAAGTTTGTCAACAAAGACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAAACTCTAAACTCTCATGTAATTGAGGATGGAAACCTTGTCATATCTATACAAGTACTACGCAAGGTTACCAATGGTTTTGCCTCAGAAAATGAACTAGGTCGTGGAGGGTTTGGGACTGTTTACAAGGGAGAACTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGCATGGGGCTATTAGCAGCAAGGCGTTGGAGGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTTCGGCACCGGCATCTGGTTTCCTTGTTGGGGTATTCCATTGAAGGCAATGAAAGACTTTTGGTTTATGAATATATGTCTCTTGGTGCTCTAAGCCAGCATCTTTTTCATTGGAAAAGCTTGAAGTTGGAGCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCACTAGATGTTGCTAGAGGGATAGAATACCTTCACAGTCTCGCCCGTCAGACCTTCATTCATCGAGATCTTAAGTCTTCTAATATCTTATTGGGTGATGATTATCGGGCTAAAGTTTCAGATTTTGGTTTGGTGAAGCATGCCCCAGATATTGAGAAGTCAGTAGTAACCAAGCTTGCTGGGACATTTGGATACCTTGCTCCTGAATATGCAGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTCAGCTACGGTGTGGTGTTGATGGAACTTCTAACTGGACTCGTGGCACTTGATGAGAGTCGGCCAGAGGAAAGCCGGTACTTGGCTGAATGGTTTTGGAGAATTAAATCGAGCAAGGAGAAGCTTATGGCTTCCATTGATCCAATTCTGGAAGCAAGTGAAGAGACTTTTGAGAGCATAAGCATTGTAGCTGAACTTGCTGGACACTGCACAGCAAGGGAAGCACATCACAGGCCAGATATGAGTCATGCAGTCAATATCCTGGCAGCATTAGTGGAAAAATGGCAACCAGTTGATGATGAATTAGATTGCTACTCTGGCATCGACTATACAAGACCACTTCCTCAAATGTTGAAGATTTGGAAGGAAGCAGAAAGCAATGATTTTAGCCATGCTTCTAGTCTTGAAAACAGCAGAAGCAGTATAGCAGCTAGGCCTCTTGGGTTTGCAGACTCTTTTACTTCTGCTGATGCAAGATGACTTAGAACTTTACTATAGTTTACGAATCATGTTGTCTTGTCCTTAATAAATTTAGTTGGATTCACCATGTCTGTTTCTGCAGCCAAGAGGCAAAATTTATGTCTCTGGTCTTTGTACTGATTTTGGATACTAAAATACTTCAAAATACCATCATAGAAAGATGTAGATAAATATAATTTTTATTTTTCTTATGTGGCCTTGTATACAGGAACATCAGTTTCTAATTGATGGAAAAGAGTCTGCGTGGCAAGTCAG 3109 0.4107 MERFQIQVVILFCFGLINTMSYGATNPNDAKVLNDFRKGLDNPELLKWPEDGDDPCGPPSWPFVYCTGDRVNQIQAKNLGLRGSLPQNFNQLSELYNLGLQRNNLSGMLPTFSGLSKLEFAFLDYNAFDVIPADFFNGLISLRVLSLEENPLNVSSGWSFPMDLEKSEQLTNLSLVHCNLVGPLPDFLGTLPSLTNLRLSGNKLSGAIPATFAQSSIQVLWLNNQEGGGMSGPIDVWLHGNQFTGPIPQNIGNLTSLQELNLNSNQLVGLIPESLAHMNLQILVLNNNMLMGPIPEFKAVNVSCDDNLFCQPKPGECSPQVTVLLDFLDKLNYPSFLISDWSGNEPCTRSTGTWFGLSCHPNSEVSIINLPRHKLNGTLSPSLAKLDSLLEIRLAGNNITGSIPSNFTNFKSLRLLDLSDNNLEPPLPDFRNDMKVFTAGNPLFPNQTGGSPSPMPINSPPSPQDPSHPPSSHEPLVPNQSSISNQSKPNDFKRLKTVAIVAGVAVFAFIALLVIYLYLCCRKNKKCSVDAPSSIVVHPRDPSDPDNMVKIAVSNATGSLSTKTGTSSLSNISGETLNSHVIEDGNLVISIQVLRKVTNGFASENELGRGGFGTVYKGELEDGTKIAVKRMEHGAISSKALEEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMSLGALSQHLFHWKSLKLEPLSWSQRLAIALDVARGIEYLHSLARQTFIHRDLKSSNILLGDDYRAKVSDFGLVKHAPDIEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLVALDESRPEESRYLAEWFWRIKSSKEKLMASIDPILEASEETFESISIVAELAGHCTAREAHHRPDMSHAVNILAALVEKWQPVDDELDCYSGIDYTRPLPQMLKIWKEAESNDFSHASSLENSRSSIAARPLGFADSFTSADAR 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02999 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Pste3g02999 948 Gene3D Ribonuclease Inhibitor 26 317 IPR032675 -
Pste3g02999 948 Gene3D Phosphorylase Kinase; domain 1 563 678 - -
Pste3g02999 948 FunFam receptor protein kinase TMK1 679 896 - -
Pste3g02999 948 Gene3D Ribonuclease Inhibitor 319 446 IPR032675 -
Pste3g02999 948 Pfam Protein tyrosine and serine/threonine kinase 604 875 IPR001245 GO:0004672|GO:0006468
Pste3g02999 948 ProSiteProfiles Protein kinase domain profile. 601 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02999 948 ProSitePatterns Protein kinases ATP-binding region signature. 607 629 IPR017441 GO:0005524
Pste3g02999 948 FunFam Receptor-like kinase TMK4 27 315 - -
Pste3g02999 948 FunFam Leucine-rich repeat receptor-like kinase 319 447 - -
Pste3g02999 948 CDD STKc_IRAK 607 877 - -
Pste3g02999 948 SUPERFAMILY L domain-like 25 299 - -
Pste3g02999 948 MobiDBLite consensus disorder prediction 441 488 - -
Pste3g02999 948 Gene3D Transferase(Phosphotransferase) domain 1 679 894 - -
Pste3g02999 948 SUPERFAMILY L domain-like 319 431 - -
Pste3g02999 948 SMART serkin_6 601 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02999 948 FunFam receptor protein kinase TMK1 563 678 - -
Pste3g02999 948 MobiDBLite consensus disorder prediction 454 473 - -
Pste3g02999 948 PANTHER OSJNBA0070M12.3 PROTEIN 9 948 - -
Pste3g02999 948 SUPERFAMILY Protein kinase-like (PK-like) 580 877 IPR011009 -
Pste3g02999 948 SMART LRR_typ_2 191 214 IPR003591 -
Pste3g02999 948 SMART LRR_typ_2 254 277 IPR003591 -
Pste3g02999 948 SMART LRR_typ_2 386 409 IPR003591 -
Pste3g02999 948 SMART LRR_typ_2 410 432 IPR003591 -
Pste3g02999 948 SMART LRR_typ_2 139 162 IPR003591 -
Pste3g02999 948 SMART LRR_typ_2 115 138 IPR003591 -
Pste3g02999 948 SMART LRR_typ_2 92 114 IPR003591 -
Pste3g02999 948 Pfam Leucine rich repeat N-terminal domain 319 359 IPR013210 -
Pste3g02999 948 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Pste3g02999 948 MobiDBLite consensus disorder prediction 474 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02999 Pste-Chr3 22800349 22803877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02999 83 895 Receptor kinase-like Gene Family AT1G55610 30.254 4.21e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste3g02999 PK_Tyr_Ser-Thr 1.6e-45 CL0016