Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02990 CAACACTGCCACAATTCACCTCTCTGACCCACCAAACACATTTCTCTCTCTAGACTCTGACTCCCGACAAAAGCAAAGCAACCTCTGCCTCCCCAGTGGCTCTCCTCGTAATATTCCCCAAAACTTTTCCTCTTTCTCAAACCACACCCACTCATCCACCACTTCCATTTATTTTTCTCACCAGAGAGAATGATATCACAGTTCCGCAGCTTCAACTTGGACACCACCTCACCTTAAGTCCCCTCTTCAACCACTGCCACTATCATTCTCACTCTCTCACTTCGACAACATGATGCCTCTCTACAACCTCCAATCTCGTGGCGTAATTTAGTCACTTACACTCTGTTTAAGTCTTCACTTTGCTTTCTCTCTCTAGGTTACTTTCCTTTTTTTCTTTCTCTCTCTACAATTTCCTCTCCCGGAGGATGGCATGCCGGAAATTGATTGCCGGGAACTTGGATCCGCATAGAAAGAGAAGTGGGGGGTTGAGAACCAAACAGGCGGGGAGAGGATCGTGCCGCGGTAGTTAGGACTCACAAATCAAACTCGCCGGAAAAATGCTTGATCTCCGCCTTTGAAAATTGCCCTTTTGTGTTTTTCTGTTCCTGCATGCTATTGTTCTTCCATTAGGTCGGCAAAAGAAAAAAAGTAAGCAAATTCTCGTCAGGTTTTGGTATGGGGTATTTGTTGAAAGAAGCTTTGAGGACTCTCTGTGCTCGGAATCGGTGGTCTTATGCTGTTTTCTGGAAAATCGGTTGCCACAATTCCAAGCTATTAATCTGGGAAGACTGCTATTATGAACATTTGCTATGCCGGCAACGTATGTTTGGGATGCCTGATTTGCCTTATCAGAATGGGGAAGGATGCTGGTTTTCTTCAGGGTCTTTGTCATCTCAGCCTGGGATTCAAAAGGGGGACCGACTCTCTTCTTTGATTAACAAAATGACCGTAAACAATTCAGTTATCATTGCAGGTGAAGGTATAATTGGACGGGCTGCATTTACAGGTAGCCATCAGTGGATTCTTTTGAACAATTTCACTAAAGATGCATATCCTCCACAGGTATATGCTGAGGTGCATCATCAATTTTCTGCTGGAATACAGACAGTAGTAGTTATTCCTGTGCTTCCTCACGGGGTAGTTCAACTTGGTTCTTTCGTGCCTATACTTGAAAACATGGGATATGTGAATGACGTGAAGAGCTTGATCTTGCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGACGACTATTCAGCAAAACTTTCTATTGAAAGACTTGCTGGACCTGTTATTGCTGGCATGCCTGTGTCTGTTGATCCACCTGTCAATACCTCAAACTGCCCTCCCTCAGTAACCAATGGCTCCAATCAGCAAAACAATTCATCTCATGCTTCAATGCCCTTTGTTCAAACACCTTGTCCTCTAAAGGCAGAGACAAATATTTGCCATGCATTGTCACCCCAAACCTATAAACTGAACCAGATTTCCAACAACCCTTGCCAACCAAAGATTATTCCAATGAGTAAAACAAACTTTGCTAGCCAGCAAGAGAATAGAGCTGTGGAAGCTGAATTAATGCCCTCACATCTTGATTCATGCCTGCAGTATTGTTCTGTTTCATATAATGCAAGATCTGCATTCAACAACTTGACTAGTTCTGGGTCTTTTGGTCAATCTGGTCCAAGTGCAGATAATCTAACATTAATGGAGCAACAAATCATATCAGCCAAAGATAATGTTAATCCTTGTTTAAACGGGTCAAGTTCCTTGAACGTGCAAGCAGATGGAGGCCATCTACTTGGCCACAATATGAGCTCTGGCAGTACTTCTCTACTAGGAGGAATCCCGATAAATGGTGGGATGAATAATACTCTTTTGAGGTCAAATCTGAGTAGTTCTGTTTCAAAATCTCCAAAAGCAGCCTCTGCTGATTTATCTGGTGAGATTGGGATTGGACGTCAAAATTGTGATTCTTTAACTAAAGCTTGGGGTTGTTCTTTGGCTAATTTGAGTAGTCAATCAAGCAACCTTCCCATGCATGTAGAAGGTTCTAATCAGAAAGTTCTCCCTGTAGATTTGAAGTGTGCTTCAACAAATCTAAAGATAGACTATGATTTGCTTCAGACCACAAATCTCCCCTCTTTTCATGTCGAGGAACATGTGCCAATTATTGGTCAAATCCCTGGTTTTGCTCAAGGTTGCCTTCATAAAGATGGTAGTAGTCAACCTATGATGAAAATGAGTCCTAAACAAAAACTAGATTGTGCTAAACCTCTGTCAGGTGATGACCTGTTCGATGTTTTAGGGGTGGATTTGAAAAACAAATTGCTGAATGAAAACTGGAATAAACTCATTGCTGATGAATTGGATTCTAATACAAAAGATATGGACAAAAAAGTAGCACCTATGAATATGCAGGGCACAACTACAACTCCTGATACTTATTCAGTTAAAGAAGCAATATCAGACAGTGACATCTTTTCTGGGATGGGAACAGACCACCTCTTGGATGCTGTGGTCTCAAACGTCAAATCTGTTGTGAAACAGGATTCTGATGATATGTCTTGCAGGACAACATTGACAAGGAATAGTACTTCCTCTGTTCCCTCGCCTGCCCACAGGCCAGTTATCTCTGATCATTTCCAAGGGAGATCATTTGACTTTCCTAAGAATGGTGGTAAAATAGGTGCTATAGAAGCTAGTTTTCTTAGATCTGGATGTAACAAGGATGATTCTGGAAACTGTTCTCAGACTAGTTCGGTTTATGGTTCTCAACTTAGTTCGTGGGTTGAAAATAGTGTGAGTGTGAAACACCAGAATAGTGTGTCAACTGGATACTCGAAGCGGGCAGATGAAGCTTGCAAACCAAATCGTAAAAGGCTTAAACCAGGAGAGAATCCCAGGCCTCGACCAAAAGATCGCCAAATGATTCAAGATCGAGTGAAAGAATTACGAGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTTTGGAACGGACTATTAAGCACATGCTTTTTTTGCAAAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACAGGGGAGTCTAAGATTGTTAATAAGGAAGGTGGACTGCTTTTGAAAGACAATTTTGAGGGTGGGGCTACATGGGCATATGAAGTTGGCTCCCAATCAATGGTTTGCCCTATTGTAGTTGAGGATTTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGAGGTTTATTTTTGGAAATAGCAGACTTAATCAGAGGATTAGGTTTAACCATCTTAAAGGGGGTAATGGAAGCTCGCAATGACAAAATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACAAGGATGGAAATATTTATGTCACTTGTTCGTCTTTTGGAGCAAACTGTGAAGGGCAATGCAACTTCATCCAATGCAGTTGATAACATGATGTTGTATCACTCTTTCCCACAGGCTACTCAGATACCAGCAACCGGAAGGCCTGGTAGTTTGCAATGAATCCACCTGCTACACGTTTTCTTAGCATGGATGTGTTGAGAGCAAGTTTGGTATGCGCTTGCAATGACTGACATCAAATCCAATCTAAGATTTCAGGTGGTCTTAACCTTGTCTAACTGTTTTGCATCTCATATCTGAACTCATTTTGCTATGGAGTGTGTAGGTACTAGGTAGTGGTGGAGATCATGTCAAGATAAATGTGTATTCCTATGTTGTAACTGAATATTTCCTTCTGTTCTGGTCAACACAATGTAATACTGTGTTGGCTTTGGCTACTGATATATTACTGAACTCTTAGATGACTTGCATCCATTTTTTTTAATTGTGTAGGGTTATTACTTAAGCAGATTGTCTTGTGATGATTAGACTAGATGTATAGATATTGTAGGATATGGAAAGAAAGGTCTCATGTGCTCATTAGCTAGCTACACACTTTCTTCTTGGCCTTTTACTGCTGGCTTTTGAAAGTTTTGTATCATGTTATATATTATGTGAATTTGAAAGTTTTGGAC 4037 0.4149 MGYLLKEALRTLCARNRWSYAVFWKIGCHNSKLLIWEDCYYEHLLCRQRMFGMPDLPYQNGEGCWFSSGSLSSQPGIQKGDRLSSLINKMTVNNSVIIAGEGIIGRAAFTGSHQWILLNNFTKDAYPPQVYAEVHHQFSAGIQTVVVIPVLPHGVVQLGSFVPILENMGYVNDVKSLILQLGCVPGALLSDDYSAKLSIERLAGPVIAGMPVSVDPPVNTSNCPPSVTNGSNQQNNSSHASMPFVQTPCPLKAETNICHALSPQTYKLNQISNNPCQPKIIPMSKTNFASQQENRAVEAELMPSHLDSCLQYCSVSYNARSAFNNLTSSGSFGQSGPSADNLTLMEQQIISAKDNVNPCLNGSSSLNVQADGGHLLGHNMSSGSTSLLGGIPINGGMNNTLLRSNLSSSVSKSPKAASADLSGEIGIGRQNCDSLTKAWGCSLANLSSQSSNLPMHVEGSNQKVLPVDLKCASTNLKIDYDLLQTTNLPSFHVEEHVPIIGQIPGFAQGCLHKDGSSQPMMKMSPKQKLDCAKPLSGDDLFDVLGVDLKNKLLNENWNKLIADELDSNTKDMDKKVAPMNMQGTTTTPDTYSVKEAISDSDIFSGMGTDHLLDAVVSNVKSVVKQDSDDMSCRTTLTRNSTSSVPSPAHRPVISDHFQGRSFDFPKNGGKIGAIEASFLRSGCNKDDSGNCSQTSSVYGSQLSSWVENSVSVKHQNSVSTGYSKRADEACKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIVNKEGGLLLKDNFEGGATWAYEVGSQSMVCPIVVEDLNPPRQMLVEMLCEERGLFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGNATSSNAVDNMMLYHSFPQATQIPATGRPGSLQ 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02990 949 CDD bHLH_AtLHW_like 741 810 - -
Pste3g02990 949 MobiDBLite consensus disorder prediction 716 751 - -
Pste3g02990 949 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 737 786 IPR011598 GO:0046983
Pste3g02990 949 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 943 IPR043561 GO:0003700|GO:0006355
Pste3g02990 949 MobiDBLite consensus disorder prediction 727 751 - -
Pste3g02990 949 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 177 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02990 Pste-Chr3 22692748 22700248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02990 525 934 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.758 9.82e-122 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02990 3 22692748 22700248 Pste3g02990 3 22692748 22700248 ECH
Pste3g02990 3 22692748 22700248 Pste1g02983 1 13094353 13101284 PCT