Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02970 CTTTTACTTGAAGCTGCATCAAGGTCAATAGAGGGATTCTTCATCTTTGGATTCGCTTTTGGAGCATCGGAGTCAGAGCTGCGAGGAAAGGAAATGGCAACTTTAGTTGAACCCCCCAACCGAATTAAGCCAAAGGGGAAGCATTATTATACAATATGGCAAACACTGTTCGAGATTGACACGAAGTACGTTCCAATCAAGCCTATTGGCCGAGGAGCATATGGCGTGGTGTGCTCTTCCATCAATAGGGAGACCAATGAGAAAGTAGCAATTAAGAAAATTGGCAATATATTTGAGAATTCAATTGATGCATTGAGAACTTTAAGGGAGCTGAAGCTGCTTAGACATATTCGGCATGAGAATGTCATTGCTTTGAAAGATGTTATGATGCCAATCCATAGAACAAGTTTTAAGGATGTCTACTTGGTGTACGAACTTATGGACACAGATCTTCATCAAATTATTAAGTCCTCTCAACCACTTTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTACTTCGAGGTCTTAAATACCTTCATTCAGCAAATATTCTTCACCGGGACTTGAAGCCTGGAAATCTTCTGGTCAACGCCAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCACGGACTAATGGAGTTGATGGTCAGTTTATGACAGAGTATGTTGTCACTCGGTGGTATCGTGCCCCAGAGCTCTTGTTATGCTGTGACAATTATGGAACCTCTATTGATGTCTGGTCAGTAGGGTGCATTTTTGCTGAGATTCTTGGTAGAAAGCCACTCTTTCCTGGAACTGAGTGTCTAAACCAGCTGAAACTAATTATAAGCGTTCTTGGAAGCCAGCATGATTCTCAACTTGAGTTTATCGATAATCCAAAAGCCAGGAGGTTTATCAAATCACTACCCTGTACTAGGGGTAGACACTTCTCTCAACTATACCCTCAAGCAGATCCGTTAGCCATAGACTTGTTGCAAAAAATGCTTGTGTTTGATCCAACCAAGAGAATTACTGTGTTAGAAGCTCTCCAGCACCCATATATGGCTGGCCTATATGACCCAAGGTGTAACCCTCTTGCTCAGGTTCCTATCAATCTTGACATAGATGAACATTGGGGAGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTACATTATCATCCTGAAGCTGCTTCTGCCAATGCA 1197 0.416 LLLEAASRSIEGFFIFGFAFGASESELRGKEMATLVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENSIDALRTLRELKLLRHIRHENVIALKDVMMPIHRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPLFPGTECLNQLKLIISVLGSQHDSQLEFIDNPKARRFIKSLPCTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMAGLYDPRCNPLAQVPINLDIDEHWGEQMIREMMWNEMLHYHPEAASANA 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02970 399 SMART serkin_6 63 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02970 399 CDD STKc_TEY_MAPK 57 392 - -
Pste3g02970 399 FunFam Mitogen-activated protein kinase 147 376 - -
Pste3g02970 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Pste3g02970 399 ProSitePatterns Protein kinases ATP-binding region signature. 69 93 IPR017441 GO:0005524
Pste3g02970 399 ProSitePatterns MAP kinase signature. 98 201 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pste3g02970 399 Pfam Protein kinase domain 64 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02970 399 ProSiteProfiles Protein kinase domain profile. 63 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02970 399 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Pste3g02970 399 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 62 359 - -
Pste3g02970 399 FunFam Mitogen-activated protein kinase 49 157 - -
Pste3g02970 399 Gene3D Transferase(Phosphotransferase) domain 1 147 376 - -
Pste3g02970 399 Gene3D Phosphorylase Kinase; domain 1 50 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02970 Pste-Chr3 22433932 22436778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02970 32 399 MAP Kinase Gene Family AT2G18170 84.511 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pste3g02970 Pkinase 3.8e-69 CL0016