Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02962 TAAAAGTTAATAGTGCTTAATGCTTTCTTTATTTATTAAAGTTAGAATTACATTCCACGTTAATTTCCTCACCGCACATAATTATTTTTCTACTTTTGGTTTTACCACTGTCTTACATTACATTCGATATTTATTTTATTTTATTTCCTTTCACTGAAAATCATTGCAGAGTGAGGTGATAGAGAGCGAGCTTCATTTGAAAATCTTCCGAAGAGACACTGAGGTTGCGTGAACGAGAACTCGGCATTGACTCAGTGACGGTTTGTTAGATGGTGAATTAGTTCAGTCACAATCTCTATTGCTATGACTTTCAGGTTTACGCTTGATTGAAATAAACTTGCACTGGCTATGGGTGTCTCTGGGAAGTGGATTAAAGCATTGGTTGGTCTAAAGAAATCAGAAAAAGTAGGAGCTTCAGAGAAAAATGGAAATGTTAACAAGTTTCACCATCAGAGACGGCAGGATGTTGAATTTGATAATAGTAAACTTCCAAATGAATTGGATAATGATGCTACTCCACCTGCTGGAGATGATAATGACCCTGCAAACCTTGATGCTCACTGTTCATCTTCTTCTTCACAACAAGCACGTGATGCTGCACATAATCAACAAACAAGGGAGGAATGGGCTGCAATATGCATCCAAACAGCATTTCGAGGATTTCTGGCCAGAAGAGCACTACGGGCCTTGAAAGGTGTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTGAGGAAACAAGCTGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTAGGGCAAGGCGTGTTTGCATTGCATTGGAAACTCAAGCAGCACAACAGAAACATCAGCAAAACCTTGTAAATGATGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGAAATTCAGGCTAAAATATTGAAGAGACAGGAGGCTGCAGCAAAACGGGAGAGAGCCATGGCATATGCTCTATCTCATCAGACATTAGTTGATGATGTTGTTAAGTGGCCTGGTGTAAGATTTTTCAAATTTTCCCCTTGGCAGTGGCAGGCAGGATCAAGACAGCAGCAGCCTGTTTCCTCTGGATTTGAACCAGATAAAAATAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGCTTCCTTGACATTAATATGAAGGATGGAGTAACAGTACACGAAAATGTAGCTAACGATGATAAAAATCGAACCACGTCTCAGTTGAGCTCTGCTAATAAGAAACCATTCTCATTAAACACTCTTCCAAGCTTCGAGGCTACTCAGGGAACTGGTCCCACTATTTCTAATGGCTCTGATTCTTCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAACACACACCCTGTTAAACCAACTTCTAAGGCAAATGTTGAAAATACTGTCGAAGAAGTTAACTCAAAATCTAGAATTGGGTCAAGATCTCATAGTAATCCAAAGGAGAGAACGTCACAGGTAGATAAGCCGGCCAAAAAACGATTATCTCTTCCTAACAACGGGGTTGCTGCTGGATCTCAAATAGTCAAACACTCTGCTAGCACTACTAATGTGAAAGGTTCGCTCAGCACGCAGAAGTCTAGTAGGGATAAACCTAAGCTCAATGGAAGAAGGGATGCGAATACAAAATCAGTTGCATAGCTCAATGGAAGAATGGAAGTGAACATAAACGCACGGACATGTAATTTTGAGAATCTCAAATAAGGGAATCACTCTCTTCTGCATTGATATATGGCCATTTGTGAAGCGGTGAGGACTTTTTACCTAGTTCATTCATAAAGACGGTGATGTGGTTTTACAGTTGAGATTGGCTTGGGTTGTGACGGGAATAAGGTTTGCCTGGTTGATACAAGTTTGTTTTTTGCCAGATTTGATGTGGTCAGAATGTCAGTTATTATCAGATAACATGATGCATTTATTTATATCCAAATGTGCACCTTTCAGTGTGCGATTGCCATCTGTCGCATTGTATTGTTGCCAGCTGTTCTGTAGTGAGCATATTTTACCTACCCATACATACATGCTTCTGCGTAGATTTCATTATCTGATAGGTTATGCTTTATTTTCTGAACACTTATCACAACTCTGATTTTATCATATTAGTATATTACCAAATGTTAAGTGATGTGCGTTTGATAAATATATACAAAAAATAGATAAATGCCTGAAATTTAGGGTTAATCTTGTTTAATATAGCC 2264 0.398 MGVSGKWIKALVGLKKSEKVGASEKNGNVNKFHHQRRQDVEFDNSKLPNELDNDATPPAGDDNDPANLDAHCSSSSSQQARDAAHNQQTREEWAAICIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCIALETQAAQQKHQQNLVNDARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALSHQTLVDDVVKWPGVRFFKFSPWQWQAGSRQQQPVSSGFEPDKNSWGWNWLERWMAVRPWENRFLDINMKDGVTVHENVANDDKNRTTSQLSSANKKPFSLNTLPSFEATQGTGPTISNGSDSSPSKSAGLLESSNTHPVKPTSKANVENTVEEVNSKSRIGSRSHSNPKERTSQVDKPAKKRLSLPNNGVAAGSQIVKHSASTTNVKGSLSTQKSSRDKPKLNGRRDANTKSVA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02962 452 MobiDBLite consensus disorder prediction 19 86 - -
Pste3g02962 452 MobiDBLite consensus disorder prediction 301 380 - -
Pste3g02962 452 MobiDBLite consensus disorder prediction 29 48 - -
Pste3g02962 452 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Pste3g02962 452 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Pste3g02962 452 MobiDBLite consensus disorder prediction 381 396 - -
Pste3g02962 452 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Pste3g02962 452 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Pste3g02962 452 SMART iq_5 113 134 IPR000048 GO:0005515
Pste3g02962 452 SMART iq_5 90 112 IPR000048 GO:0005515
Pste3g02962 452 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Pste3g02962 452 FunFam IQ-domain 11 90 141 - -
Pste3g02962 452 MobiDBLite consensus disorder prediction 406 435 - -
Pste3g02962 452 Gene3D - 91 133 - -
Pste3g02962 452 MobiDBLite consensus disorder prediction 68 84 - -
Pste3g02962 452 MobiDBLite consensus disorder prediction 295 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02962 Pste-Chr3 22370812 22378463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02962 1 444 IQD Protein Family AT3G22190 51.991 4.51e-114 340
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02962 3 22370812 22378463 Pste3g02962 3 22370812 22378463 ECH