Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02960 TGAAAATTAGGGTTGCGACTCGGAGCTAGAAGAAGATGTTTGGGAGAGTGCCGAAGAAAAGCGATAGCACTAGGTACTACGAAATCCTCGGCGTTTCCAAGAACGCCTCGCAGGATGATTTGAAGAAGGCTTACAAGAAAGCCGCCATTAAGAATCACCCCGACAAAGGCGGTGATCCCGAAAAGTTCAAAGAGCTTGCTCAAGCCTATGACGTTCTGAGTGACCCTGAAAAGCGTGAGATTTATGATACGTATGGCGAGGATGCTCTTAAGGAGGGAATGAGTGGCGGTGGTGGTGGCCATGACCCATTTGATATATTTAGTTCGTTCTTTGGTGGAAGTTCATTTTCAACAGGTGGTAGCAGCAGAGGACGGAGGCAGAGAAGGGGAGAGGATGTGGTCCATCCTTTGAAGGTTTCTTTGGAGGATCTTTACCTAGGAACCTCCAAGAAACTCTCTCTTTCCCGAAACGTGTTGTGCTCAAAATGCAATGGGAAAGGTTCCAAATCTGGGGCTTCAATGACGTGTGCTGGTTGCCAAGGTACTGGTATGAAGGTGTCTATTAGGCACCTTAGTCCTTCTATGATTCAGCAAATGCAACATCCCTGCAACGAGTGTAAGGGTACTGGAGAGACCATCAATGATAGAGACAGATGCCCACAGTGCAAGGGAGAGAAGGTTGTTCAGGAGAAGAAAGTACTCGAAGTCGTTGTGGAGAAGGGAATGCAGAACGGACAGAAGATTACATTCCCGGGTGAAGCTGATGAAGCTCCTGATACAATCACTGGGGATATCGTCTTTGTGCTACAACAGAAGGAACATCCAAAGTTCAAAAGAAAGAATGATGACCTATTTGTAGAGCACTCATTGACACTTACCGAGGCTCTGTATTCATACAAGGCAATAAATGATGAGGGAATGCCAAACTACCAGAGACACTTCTTGAAGGGAAGGCTTTACATTCACTTTAGCGTGGAATTTCCTGATTGTCTGAGTCTTGATCAGGTGAAGGCTTTGGAGGCGGTTCTGCCAGCAAAACCTTCTTCACAGTTGACAGACATGGAATTAGACGAGTGTGAGGAGACGACACTGCATGATGTCAACATGGAGGAAGAGACAAGGAGGAGACAACAAGCTCAGCAGGAGGCGTACGAGGAAGATGATGATATGCATGGTGGTGCTCAGAGAGTACAGTGCGCCCAGCAGTAACGAATGAGCCGCAGGAGTGCTAATTGAACCTGTGATGTGATAATCTCGATTATGTTATTTTTAGCCGATGTGCGGACTAAATATAATTAGTGTTTGATCAAACGATTTTGACCACCAAACACTGTAGCATTTTTTGTTTAAGAAATTATTTCACAAAAGACATCTTAAATACAATTTTTTTTTGTGATCTCTATGTGCATATGTATTCCTCTCATTTTTTCCTCCTCTATTCCTTGCACGGACATTATTTTTATTTAATTTTCATATGCT 1478 0.4418 MFGRVPKKSDSTRYYEILGVSKNASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDTYGEDALKEGMSGGGGGHDPFDIFSSFFGGSSFSTGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSKSGASMTCAGCQGTGMKVSIRHLSPSMIQQMQHPCNECKGTGETINDRDRCPQCKGEKVVQEKKVLEVVVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFKRKNDDLFVEHSLTLTEALYSYKAINDEGMPNYQRHFLKGRLYIHFSVEFPDCLSLDQVKALEAVLPAKPSSQLTDMELDECEETTLHDVNMEEETRRRQQAQQEAYEEDDDMHGGAQRVQCAQQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02960 390 CDD DnaJ 14 63 IPR001623 -
Pste3g02960 390 SUPERFAMILY Chaperone J-domain 8 108 IPR036869 -
Pste3g02960 390 FunFam dnaJ protein homolog 10 110 - -
Pste3g02960 390 ProSiteProfiles Zinc finger CR-type profile. 135 219 IPR001305 GO:0031072|GO:0051082
Pste3g02960 390 Gene3D - 110 260 - -
Pste3g02960 390 FunFam Chaperone protein dnaJ 3 215 255 - -
Pste3g02960 390 SUPERFAMILY HSP40/DnaJ peptide-binding domain 265 327 IPR008971 GO:0006457|GO:0051082
Pste3g02960 390 Pfam DnaJ C terminal domain 122 285 IPR002939 -
Pste3g02960 390 MobiDBLite consensus disorder prediction 354 381 - -
Pste3g02960 390 FunFam DnaJ subfamily A member 2 148 214 - -
Pste3g02960 390 Pfam DnaJ domain 14 71 IPR001623 -
Pste3g02960 390 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 145 217 IPR036410 -
Pste3g02960 390 Gene3D DnaJ domain 10 109 IPR036869 -
Pste3g02960 390 MobiDBLite consensus disorder prediction 354 390 - -
Pste3g02960 390 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pste3g02960 390 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pste3g02960 390 PRINTS DnaJ domain signature 15 33 IPR001623 -
Pste3g02960 390 CDD DnaJ_C 119 317 - -
Pste3g02960 390 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Pste3g02960 390 SUPERFAMILY HSP40/DnaJ peptide-binding domain 114 273 IPR008971 GO:0006457|GO:0051082
Pste3g02960 390 Gene3D - 148 214 - -
Pste3g02960 390 Pfam DnaJ central domain 148 214 IPR001305 GO:0031072|GO:0051082
Pste3g02960 390 CDD DnaJ_zf 148 214 IPR001305 GO:0031072|GO:0051082
Pste3g02960 390 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 287 371 IPR044713 GO:0006457|GO:0030544
Pste3g02960 390 Gene3D - 286 343 - -
Pste3g02960 390 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Pste3g02960 390 SMART dnaj_3 12 66 IPR001623 -
Pste3g02960 390 Coils Coil 355 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02960 Pste-Chr3 22358679 22361479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02960 14 73 C2H2 Transcription Factor Family AT1G74250 42.029 1.44e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02960 3 22358679 22361479 Pste3g02960 3 22358679 22361479 ECH
Pste3g02960 3 22358679 22361479 Pste1g03018 1 13397704 13400540 PCT