Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02959 ATATACACAACGGTTCTGTTATCAGCATCCTTATTTGTCTCATTATTTCTATCTCTCTCTCTCTCCTCAAAACCAAAGGCAACAGTAACAGGATTGCTCAGCAGATTCGTTCCCGTTTACAAACAAGTACAAATCGAATGGAATTTGACGGAGTTACCTCCCCACTCAACTCCGTTACTCTTAACCGACAGCTCCATGGATCCCTTAATCCACAAGCTCCGTCGCCACCTTCTCGCATGGCTTCACCGATCTCGCTCCGGTCCTGTGTTTTTTGTGCGAAGAATTTCTTATAAGGACGTTAGAGTAGCGACGGATGGTTTCCACAGAGTGGTTTATAGTAATTCCCAAATTTCTGCGTATGCTGCAAGGTTTGGAGACGGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGTTTCGATGAAGGAAACGACAATTTCTACAGACACGTGGAATTCTTGGGGCGCTTGCATCATCGCCATCTTCTCTCGCTCAGAGGCTTTTCCATCGGACGCAATCACAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTGAAGGATCACCTAAATGACCCTTTGAAGACTCCCTTGGATTGGAGGAAGAGGTTACAGATAGCTAATGGCGTTGTGGCTGCATTGGAGTATTTGTTTCTCTTCAGTGAACCACCAGTTTGTCATGTCTCTGTAAACTCGAGCAATATTATGTTAGATGAGAACTTCAGAGCCAAACTATCTGACTTTGGCCTTCTTACATCTGGTGGAAATTCTGATATGATGCCATATTCAGAAGATTGTATGAAGCAGAAAAGTTCCAAGATTATATTCCAACTTGGAGTGCTCATACTGGAACTGGTCACTGGACAGTCTTCAGAGATGGAAGGTTCTGATTTAATAGAATGGATCCAAGAATCCCGATTTTATAATTCCATAGATAAGATGATAGATCCTGATCTTGGTAACAATTACGACTGTACGGAGCTTAAGAGTCTTCTGGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTACATTTACAATTCCCCAGTTATTCCGGCATCTCCAAAGGAAGATTGATATTACCGGTGACTAAGATTGTTATCTGTTTTGTTTGAAAACCTTGTGGTTTCTTGGGAGAATATTTTGCACTGTGAATGCTTTCTCACTTTTCGTACGTTTGAAGAGTCAATTTTGATTACTGCGATAACGTTCATTTGATATATGAATAGAAAAATGTCA 1247 0.4146 IYTTVLLSASLFVSLFLSLSLSSKPKATVTGLLSRFVPVYKQVQIEWNLTELPPHSTPLLLTDSSMDPLIHKLRRHLLAWLHRSRSGPVFFVRRISYKDVRVATDGFHRVVYSNSQISAYAARFGDGGGVCLVREVKGFDEGNDNFYRHVEFLGRLHHRHLLSLRGFSIGRNHKRLLIFDNIENGSLKDHLNDPLKTPLDWRKRLQIANGVVAALEYLFLFSEPPVCHVSVNSSNIMLDENFRAKLSDFGLLTSGGNSDMMPYSEDCMKQKSSKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPTFTIPQLFRHLQRKIDITGD 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02959 366 Gene3D Phosphorylase Kinase; domain 1 82 180 - -
Pste3g02959 366 PANTHER OS01G0253100 PROTEIN 88 361 - -
Pste3g02959 366 FunFam probable receptor-like protein kinase At1g49730 276 365 - -
Pste3g02959 366 FunFam Protein kinase superfamily protein 81 180 - -
Pste3g02959 366 Gene3D Transferase(Phosphotransferase) domain 1 182 364 - -
Pste3g02959 366 SUPERFAMILY Protein kinase-like (PK-like) 89 334 IPR011009 -
Pste3g02959 366 ProSiteProfiles Protein kinase domain profile. 97 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02959 366 Pfam Protein tyrosine and serine/threonine kinase 143 259 IPR001245 GO:0004672|GO:0006468
Pste3g02959 366 FunFam Protein kinase superfamily protein 182 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02959 Pste-Chr3 22351480 22355760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02959 87 362 Receptor kinase-like Gene Family AT3G19300 36.120 1.52e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pste3g02959 PK_Tyr_Ser-Thr 2.3e-14 CL0016