Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02921 TTTACCCCCGAAAAAGGAGTGGTTATCGAACAAAACGAGCATAGAGAAGCCTCCAAAGCTTTGGTTTCTTCACCACCACCACCCTTTCCCTCTCTCTCTTTCTAAAAATCAGAAACAACAAACACAAACCGGTAAAGGAAAAAGGGTTTTCCAGTGAGATCTAGGGTTTCCGTCTATTCGGAGAGAAGGTATTGATCGAACGATCTCGACGACCAGGTGAGGGGGTGGAGTACTACACCATGGATTCGGTGCCTTCGAATTCGCATGGAAATCTTGACGAGCAGATTTCTCAGCTCATGCAGTGCAAACCTTTGTCCGAGCAAGAGGTAAGGATCTTGTGTGATAAGGCGAAAGAGATTTTGATGGAAGAGAGCAATGTCCAGCCTGTGAAAAGTCCTGTTACAATTTGTGGTGATATTCATGGGCAATTCCATGATCTTGCAGAGCTTTTCCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTCATGGGAGATTATGTGGACCGTGGCTATTATTCTGTTGAAACTGTTACGCTTTTGGTGGCCCTTAAAGTGCGTTATCGTCAACGTATCACTATTCTGAGGGGAAATCATGAAAGTCGCCAGATTACTCAAGTTTATGGGTTTTATGATGAGTGCCTGCGAAGTAAGTATGGTAGTGCTAATGTTTGGAAGATCTTTACTGATTTGTTTGACTACTTTCCATTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTGTCACCATCTATTGAAACCCTTGATAACATACGTAATTTTGATCGCGTACAAGAAGTTCCTCATGAGGGACCCATGTGTGATCTTCTATGGTCTGATCCAGATGATCGATGTGGTTGGGGCATCTCTCCTAGAGGTGCTGGATATACCTTTGGCCAGGACATATCTGAGCAATTTAATCACACCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATGATCAAAAGGTGGTTACCATATTTAGTGCACCTAACTATTGTTACCGTTGTGGGAACATGGCATCAATTCTTGAGGTTGATGATTGCAAAGGACACACATTCATTCAGTTTGAGCCAGCTCCAAGAAGGGGAGAGCCAGATGTAACCAGGAGAACGCCTGATTACTTCCTATGATACTACTTTTGGTTGAGTTGCTGTTACCTGCACAGCAACTACTGCACTGCAGTAATCTGCAAGCTCATATATTTGTCCAAATCAGAGCCATGAATCATTTGATACTTAAACTTTCCAAGTTAGGGGCTTCGCTGGATTTGTTATTTAGTTGATTTATAGCTGAATCTTTCCAAGAAGAAGCTGAGCAGCAGGCGTGCTATTGTGGGCATGTGTATCATTCCAGCTTGCATTGTATTAATTTTAATGTTCTTTTTTTTCTTTTCCCAATTTTCCTTGTTTATTTATTTGCAACTCTTGACATTTCTTTTCTCAATTTAGGATTATTGATAAGGGGGTGGGTTTCTGTAGATGGATAATGCTTTAACATATCTTTTAATGGGTGTTCTATGATTTTTTTATCTGCTTTGTGAGAATTATATTCTAATAGGTAGTTTTGTTTTTAAATGAAATGACTTCTAATTTTCCA 1644 0.4057 MDSVPSNSHGNLDEQISQLMQCKPLSEQEVRILCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRSKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02921 312 SUPERFAMILY Metallo-dependent phosphatases 10 297 IPR029052 -
Pste3g02921 312 Gene3D - 5 312 IPR029052 -
Pste3g02921 312 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 11 312 IPR047129 GO:0004722
Pste3g02921 312 ProSitePatterns Serine/threonine specific protein phosphatases signature. 116 121 IPR006186 GO:0016787
Pste3g02921 312 FunFam Serine/threonine-protein phosphatase 5 312 - -
Pste3g02921 312 Pfam Calcineurin-like phosphoesterase 53 245 IPR004843 GO:0016787
Pste3g02921 312 CDD MPP_PP2A_PP4_PP6 11 296 - -
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 53 80 IPR006186 GO:0016787
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 151 177 IPR006186 GO:0016787
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 115 139 IPR006186 GO:0016787
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 82 109 IPR006186 GO:0016787
Pste3g02921 312 PRINTS Serine/threonine phosphatase family signature 180 207 IPR006186 GO:0016787
Pste3g02921 312 SMART pp2a_7 25 296 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02921 Pste-Chr3 22017117 22025319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02921 17 242 Calmodulin-binding Proteins AT5G63870 33.582 2.37e-30 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02921 3 22017117 22025319 Pste3g02921 3 22017117 22025319 ECH
Pste5g00547 5 3551037 3554672 Pste3g02921 3 22017117 22025319 ECH
Pste4g02895 4 20440416 20445773 Pste3g02921 3 22017117 22025319 ECH