Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02917 GACAAAGGGCAGAAGGGCCTGTTCCCTTTACATCTCTCTGTCTCGTCTTCTTCATTTAATCTCTCTCTCTTTTCTCCTGAGAGGAGAGAGACTCGCAAAGGAACAAACACATTCTCGTAAACTATACCTCGCATTCTGTAAACAATGGCGAGAACTGTCTCCCACAGCAGCACCAAGGATGAGGGCACCAATGCAACTAAGGTAGAGGAGGCTGAGGTTAGAGGTGGCGTCAGGAAGGGCCCATGGACCCCAGCAGAAGACGCCATTCTCATTGAGTACGTCAAGAAGCACGGTGAAGGGAATTGGAACTCCGTTCACAAGAATTCTGGTTTATTAAGGTGCGGCAAAAGTTGCAGACTCAGATGGGCCAATCATCTCAGGCCTAATCTCAAGAAAGGTGCATTCTCTACAGACGAAGAGCAAATCATCATCGACCTTCATTCCAAGCTTGGAAACAAATGGGCCCGAATGGCAGCACAGTTACCTGGTAGGACCGACAATGAAATAAAGAACTTTTGGAACACTCGAATGAAAAGGCGTCAGAGAGCAGGGTTACCTCTTTATCCTCCTGAAGTCCACGCAGAAGCCACCGCATATCATCTACAACAACAGCAGCACCGCTACTTGGAACAGCAATCACATTCATCTTCCTCCTTCTCATTACTCCTATCATCTTGTTACCCCAAGAAGTTCAATGATCCAAGCCAAACCAATCTCATCAATGCAAATCTGCAGCAAAACCAACCTGAGACTGCTAGCTGTTACAATATGCAGAATTCAAGCCAACAATTTAAGTTTTCTAATGAAAATAGTGGAAATGGAAACCTTAGTTTTCCATTATCTCCTCTTTCTCCATATGGATCATCATCCTCCACCCTTCTCAACCACAGTTTTGGTGATCATGGCTTCATGGCGGGATCACCTTATGAACCATTTCCTTTGATGCAAGGCTCCAACACTGACATCTCTTCCAACCAAACACCAACCCCCGCTTCATCCTATGCTAGTGGTGCTGATGGCTTGATGGGATCTTCAAGCATGGTTAATAATAACAACAACAATAATAATAATAATAACAATAATAACAATGATTACTATGAAGTTGCACCATTGTCTGCTCAAGGAAACAGTGGGCTGTTGGATGCTCTGGTGATGGAGGCTCAAGGACTTTCTCACAATAACAAAGCCAAGAGTGAGGAGGATTCTACCTTAGCTGGGAAGTTATCTCGCAAGAGAAAAAACATGGAATGTGCAGAGGACAGAGGCGCTATGCTTGGGGGGTCACCCATGAAGAAGAACAGTGGCAACAGTACTACTAATGAAAGCCAGAGGGATGATGATATTAGCTCCTCTCAATTGTCAAAAGGGAAGAAGCAAATTAGCGAGGATCCGGTTGAAGAGATGAATGCAATGGACGATGATTTGTTTAGCCTGCTGAACCAATTTCCCTTAGAAATGCCAGTGCCTGAGTGGTACCGTAGAGGGGAAAATCAGTCATTGGGACTTGAAAATCAACCGAATGCTTCACCACCTGACCCTGCCGATCAAGAATATGCTTGGACTCTCGGAACTTGCTGGAACAACATGCCTGGCATATGCTAA 1602 0.4501 MARTVSHSSTKDEGTNATKVEEAEVRGGVRKGPWTPAEDAILIEYVKKHGEGNWNSVHKNSGLLRCGKSCRLRWANHLRPNLKKGAFSTDEEQIIIDLHSKLGNKWARMAAQLPGRTDNEIKNFWNTRMKRRQRAGLPLYPPEVHAEATAYHLQQQQHRYLEQQSHSSSSFSLLLSSCYPKKFNDPSQTNLINANLQQNQPETASCYNMQNSSQQFKFSNENSGNGNLSFPLSPLSPYGSSSSTLLNHSFGDHGFMAGSPYEPFPLMQGSNTDISSNQTPTPASSYASGADGLMGSSSMVNNNNNNNNNNNNNNNDYYEVAPLSAQGNSGLLDALVMEAQGLSHNNKAKSEEDSTLAGKLSRKRKNMECAEDRGAMLGGSPMKKNSGNSTTNESQRDDDISSSQLSKGKKQISEDPVEEMNAMDDDLFSLLNQFPLEMPVPEWYRRGENQSLGLENQPNASPPDPADQEYAWTLGTCWNNMPGIC 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02917 485 Gene3D - 31 83 - -
Pste3g02917 485 MobiDBLite consensus disorder prediction 343 416 - -
Pste3g02917 485 MobiDBLite consensus disorder prediction 382 410 - -
Pste3g02917 485 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Pste3g02917 485 Pfam Myb-like DNA-binding domain 84 127 IPR001005 -
Pste3g02917 485 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Pste3g02917 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Pste3g02917 485 MobiDBLite consensus disorder prediction 14 28 - -
Pste3g02917 485 MobiDBLite consensus disorder prediction 268 318 - -
Pste3g02917 485 MobiDBLite consensus disorder prediction 1 31 - -
Pste3g02917 485 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 13 451 - -
Pste3g02917 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Pste3g02917 485 MobiDBLite consensus disorder prediction 345 371 - -
Pste3g02917 485 FunFam Transcription factor MYB97 86 165 - -
Pste3g02917 485 FunFam MYB-related transcription factor 30 83 - -
Pste3g02917 485 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Pste3g02917 485 Gene3D - 86 132 - -
Pste3g02917 485 SMART sant 83 131 IPR001005 -
Pste3g02917 485 SMART sant 30 80 IPR001005 -
Pste3g02917 485 CDD SANT 33 78 IPR001005 -
Pste3g02917 485 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Pste3g02917 485 CDD SANT 86 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02917 Pste-Chr3 21965756 21969047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02917 25 485 MYB Transcription Factor Family AT2G32460 38.447 1.33e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g02917 Myb_DNA-binding 4.3e-14 CL0123