Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02909 ATGATTATATAAATGGATGTTTGGCGTTGAGAAAGGCAGCAGAAGCAGTCATCGTGATAGGTCAAAATATAAATAAAATTTTGTTGAAAATCGTTGTTGCATTGCATCGCCATCGCAGTGGTTGAATGGCGGGCGTTTCTCTCAAGTGCGGTGACTGCGGTTCTCTGTTGAGAAGCGTAGAAGAAGCCCAAGAGCACGCCGAACTGACTTCCCACTCCAACTTCTCCGAATCCACCGAACCCGTTCTCAACCTCCTCTGCACCGTTTGCTCCAAACCCTGCCGATCCAAAACTGAGAGTGATTTGCACACGAAAAGAACCGGCCACGCTGAATTTGTTGATAAGACTTCCGAGGCCGTTAAACCGATCAGTTTGGAGCCTCCCAAGCTGGATGCAACTGCTTCCTCCGAAAACCCTTCCGCTTCTGCATCTACTCACCAAAATGAAGAAGTGGTTGTTCCTGAAGTAGACAAAAAGCTACTCGAGGAACTTGAATCAATGGGATTTTCAACTGCACGAGCAACGCGGGCACTTCATTACTCTGGTACCTGCCAACACCAAAATGAGGCCCCTAAACCTTCTCTTACCCCAGAAGAACTGAAGGTCAAACAACAGGAACTAAGGGAGAGAGCTCGTAAGAAGAAAGAAGAGGAGGAGAAGAGAATGGAGAGGGAAAGGGAAAAGGAGAGAATTCGCATTGGCAAGGAGTTGCTGGAAGCAAAGAGGATTGAAGAAGAGAATGAGAGAAAACGGTTGTTGGCCTTAAGAAAAGCAGAGAAAGAGGAGGAGAAAAGGGCTAGGGAGAAAATCAAGCAAAAGTTGGAAGAAGACAAGGCAGAAAGAAGGCGGAGACTTGGACTGCCTCCAGAGGAGCCTTCAGCAGCAGCCAAACCTTCACCTGTTGTGGAGGAGAAAAAGAGTTTTGTGCCTATTAGGCCGGCCACAAAAGCTGAGCAAATGAGAGACTGCCTCCGATCTCTAAAGCAGAACCACAAGGAGGATGATGCCAGAGTAAAGAGAGCATTCCAAACTCTTCTAACTTATGTGGGGAATGTTGCTAGAAATCCCAACGAGGAAAAATTCAGGAAGATACGTCTTAGCAACCAAACTTTTCAGGAAAGAGTTGGTTCCTTGAAAGGGGGCATTGAGTTTCTAGAAATTTGCGGGTTTGAGAAGGTTGATGGTGGTGAGTTCTTGTTTTTGCCTAGGGACAAAGTTGAGATAGCTGTCCTGAATTCAGCTGGTTCTGAACTAGACTCTGCAATAAAGAATCCCTTTTTTGGAGTTCTTTAGATGAGGCAAGGCAACTGCTATAATCGTAGGCTTGTCAATTATAGTTTCATATTTTGAAGTCGAATGCTACATTTTGTTAATTTAACATACTGTTTTTTTCCTTAGCCGCCGAAGGTAACTGTAGAGATTTATACTTGGCCGTCATAAAAGTTTGAGGTTTATACAAATTTGTTTCATGACTTCGTCTTGTATCTAATAATGCATGCGATTGCTTGGCTTGCTC 1515 0.4455 MAGVSLKCGDCGSLLRSVEEAQEHAELTSHSNFSESTEPVLNLLCTVCSKPCRSKTESDLHTKRTGHAEFVDKTSEAVKPISLEPPKLDATASSENPSASASTHQNEEVVVPEVDKKLLEELESMGFSTARATRALHYSGTCQHQNEAPKPSLTPEELKVKQQELRERARKKKEEEEKRMEREREKERIRIGKELLEAKRIEEENERKRLLALRKAEKEEEKRAREKIKQKLEEDKAERRRRLGLPPEEPSAAAKPSPVVEEKKSFVPIRPATKAEQMRDCLRSLKQNHKEDDARVKRAFQTLLTYVGNVARNPNEEKFRKIRLSNQTFQERVGSLKGGIEFLEICGFEKVDGGEFLFLPRDKVEIAVLNSAGSELDSAIKNPFFGVL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02909 388 SMART PGNneu 298 361 - -
Pste3g02909 388 SUPERFAMILY UBA-like 101 141 IPR009060 GO:0005515
Pste3g02909 388 MobiDBLite consensus disorder prediction 216 246 - -
Pste3g02909 388 Coils Coil 158 190 - -
Pste3g02909 388 Gene3D - 280 378 - -
Pste3g02909 388 PANTHER F13M7.16 PROTEIN 145 388 - -
Pste3g02909 388 MobiDBLite consensus disorder prediction 89 107 - -
Pste3g02909 388 Pfam PUB domain 295 365 IPR018997 -
Pste3g02909 388 MobiDBLite consensus disorder prediction 157 188 - -
Pste3g02909 388 CDD PUB_UBA_plant 282 388 - -
Pste3g02909 388 Gene3D - 113 148 - -
Pste3g02909 388 SUPERFAMILY PUG domain-like 269 384 IPR036339 -
Pste3g02909 388 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Pste3g02909 388 Coils Coil 193 238 - -
Pste3g02909 388 MobiDBLite consensus disorder prediction 78 110 - -
Pste3g02909 388 MobiDBLite consensus disorder prediction 216 270 - -
Pste3g02909 388 MobiDBLite consensus disorder prediction 141 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02909 98 388 C2H2 Transcription Factor Family AT1G04850 73.981 4.91e-130 374