Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02903 GTATACGGTGTACACCTCTACCCATCATTTTCCAATCTTCAGTTAAGTTACTCTCGTCTCTTGGAATGGGAATGGGATGGTATTGGTTTGAAATTTGTGGTTTTGCACCTTCTGATATGGATGTGGATATTTGGTGTTGCTCACTGCAGAAGGCCTGACAGTGTGAACATTGGTGTGGTTTTTGCTTTCGATTCTGTCATAGGTAGAGTTGCAAAGGAGGCTATGGAAATGGCCGTTTCTGATGTCAATATGGACCCCACAGTACTTGAGAAAGGGGTTGCAGCCATAATTGGTCTACAGTCATCTGCCGGAGCTCACACAGTTTCTCAAATTGCTGATGCTCTCCAAGTTCCTCTTGTTTCATATGCTGCCACTGATCCAACCCTGTCCTCCCTCCAGTTTCCTTTCTTTATTCGTACTACGCAAAGTGACTTGGCACAAATGACTGCAATGGCAGATCTAATTGACTTTAATGGATGGAAAGAAGTTATTGCTGTATTCTTGGACGATGATTACGGAAGAAATGGAATATCTGCTTTGAATGATCAACTTGAAAAAAGGAGATTGAAAATTTCTTATAAACTGCCTTTGAGTATTAAGTTTGATCTTGATGAAATCACTAACTTGCTCAACCAATCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCATGTCAACCCTGATCCGAGATTGAGAATTTTTTCCATTGCCCAGAAACTTCAGATGATGACCAAGGATTATGTATGGCTCGTCACAGATTGGCTCTCGGCTACACTAGATTCATTATTCCCAGTGAATAGGACCTCTTTCAATGTTCTCCAAGGGGTCGTTGGTCTTCGTCAACACATTCCAAATTCCAAAAAAGAGAGAGCTTTTGTTTCTCAATGGAAAAAAATGCAAAATGAAGGATTAATAAATACTAGTTTAAATTCCTATGGATACTATGCTTATGATACAGTTTGGGCAGTCGCACGCTCAATTGATAAATTCATCAAAATACATAATAATATTACATTCTCTCTTCCTGATAACTACAATCTATCTCATACTACAGAAGGAATTGGTATTCAGCTTGACAAGCTCAAAATCTTTGCTGGTGGATCTGATCTGGTCAACATATTGTTACAATCAAATTTTACTGGTGTGAGTGGTCAAGTTCAGTTTAATTCAGACCGAAATATTTATAGTGGGGGTTATGATATTATCAATGTTAATCAGATGGGAATTACTAGGGTTGGTTTTTGGTCTAATTATTCAGGATTTTCAGTTGTACAACCCGAAGCTCTTAAAAAAAGGGAACATAATAGGTTTTCCCATGATCAGAAGCTTGGCAATATTACTTGGCCAGGTGGAATGACAGATCGACCTCGTGGCTGGGTGATTGCTGATTATACCAAGCCACTGAGGATTGGAGTGCCAAAAAGAGCAAGTTTTGTTGAATTTGTAACTGAACTGTCAGACAGTCATCAAATTCAGGGGTACTGCATTGATGTTTTCAAGAAAGCCCTTGAATTTATCCCATATGAAGTTCCTTTTGTATTCAAGCCTTTTGGGAATGGTAACGAAAATCCCAATTATGACACACTTGTGAAAATGGTTGACGAAAATGTATATGATGCTGTTGTTGGGGACATTGCAATTGTGACAAACCGAACAAAGATTGTGGATTTTTCTCAGCCTTTTGCATCATCTAGCCTTGTCATAGTGGCTCCTATCAACAAAGGAGGATCAAATGCTTGGGTGTTCCTGAAACCATTTACAGCGGAAATGTGGTGTGTCACTGCTGCATCATTTATAGTGGTTGGAATGGTTATATGGATTCTTGAGCACCGAGTCAATAATGACTTCCGTGGTCCTCCTAAGAAGCAACTTGTGACAATGTTAATGTTCAGCCTCTCAACACTATTCAAGAAAAATCAGGAAGATACTGTAAGCTCACTTTCCAAAATGGTGATGATAGTCTGGCTTTTTTTATTGATGGTGATCACGGCTAGCTATACAGCGAACTTGACTTCAATTCTTACAGTGGAGAAGCTTTCATCGCCCATCACAGGAATTGATAGCTTGATTGCAAGTAACTGGCCTATTGGATACCAAGTAGGGTCATTTGCTTACAGCTATCTGGCAGATAATCTTTATGTAGCAAAATCAAGACTAGTTCCCCTAGGCTCCCCTGAGGAATATGCTATGGCACTGCAGAAGGGACCAATGGGTGGAGGGGTTGCAGCTATTGTTGATGAGCTTCCATATGTTGAGTTATTTCTATCAAAAGAAACTGATTATGGTGTTATCGGACAGCCATTTGCCAGAAGCAGTTGGGGATTTGCTTTTCAAAGAGAATCTCCTCTTGCTTTTGACATGTCTACAGCAATTTTGAAACTCTCTGAGCACGGAGATCTTCAAAAGATACACAAGAACTGGTTCTGTAAAATGGGTTGCCCTGGAGAAAGGACAAGCAACTCCAAGCCTGACCAGCTTCACTTGCTTAGCTTTTGGGGTCTGTATCTCTCATCTGGTGTTGTTGCTCTGGCTGCACTTGTTTTGTTTCTGCTGCGAATGATTCGTCAATACGCCCGATTCAAACAAAAACAAAAGGATATTGCATCTTCATCCTCGGAACCATCCGGCATTCATTCTTCCCAGGTGCTGTGGTTCACAAGGCATGGAAGAATGTTTGAGGGGAGGGTGTTGTATCTCTTGGTTTTGTTCTTGTGGATTCCCACAGAGGTGGTGGTGGGTAGGACAAGAACTACCGTCACAAACTCTACTATTTCTTCGACATCTAGAGTTTTGAGCGTTGGAGCACTTTTTACTTTTAATTCTGTAATTGGAAGATCGGCTAAAGCTGGACTTATGGCTGCTGTAGAAGATCTTAAAGCTAATTCGAGCGTTCTTCCTGGCATTAAACTGGAACTTATTTTACATGATACAAATTGCAGTGGGTTTGCTGGAACAATGGAAGCTTTGAAGTTGATGGAGGATGAAGTGATTGCTGCCATTGGTCCACAGTCCTCAGGAATAGCCCATATCGTCTCTCATGTTGTCAATGAACTCCATGTCCCTCTTGTTTCATTTGGGGCAACAGACCCTTCTCTATCTTCCCTTCAGTACCCATATTTTGTTCGTACCACCCAAAGTGACTATTATCAGATGTATGCAATTGCAGACTTGGTAGATTACTATAGATGGAGGGAGGTAATAGCCATTTATGTAGATGATGATAATGGAAGGAATGGTATTTCAGTACTTGGAGATGCTCTGGCAAAGAAACGTGGCAAGATCTCTTACAAAGCTGCATTCCCTCCCGGAGCCCTCAAGAAAGACATCAGTGACTTGTTAAATAGAGTGAATCTATTGGAATCACGGGTCTTTGTTCTGCATGTTAATCCTGAAACAGGTTTGAGCATTTTTTCTCTAGCTGAAAAGCTAGGAATGATGAACAGTGGCTATGTGTGGATTGCGACAGATTGGCTTGCTTCAGTACTTGATTCATTAGACCCAGTTGATCCCCACACTGTGAATCTCTTACAGGGGGTTTTGGTTTTACGTCATCACACTCCTGATACTAATGAGAAAAAGAGTTTTTTCTCCAGGTTGAAGAAACTAAAAGACAAGGAAACTCCAAGCTTCAATTCCTATGCATTGTATGCATATGATTCTGTGTGGTTAGTTGCCCATGCTCTTGATGCTTTTCTCAAGCAAGGTGGTGTGGTATCTTTCTCCTCTGACACTAGGTTGAACAACACAAATGGAAGCATGTTGAATTTACAGTCACTTCGTGTTTTTGGAGAAGGCCCTACTTTTCTCCAGACAACTTTGAGAACTAACTTCACTGGTCTCACTGGACAAGTTCAGTTTGATATGGAAAAGAATAGAATACATCCAGCATATGATATCTTGAATATTGGTGGATCTGGAATGAGGAGAATTGGCTATTGGTCTAATTACTCAAGTCTCTCAGTTGTGGCTCCAGAAATTTTGTATAAGAAACCACGTAACACTTCAACAAGCAGCCAGCAACTTTATGGTGTTATATGGCCAGGAGAAACTGCAGCTAAACCAAGAGGGTGGGTGTTCCCCAACAATGGAAAGCCACTGAGAATAGCAGTGCCTAACCGAGTAAGTTACTTGCAGTTTGTGGCTAAAGACAAGAACCCCCCTGGAGTAAGAGGCTATTGCATTGATGTCTTTGAAGCTGCTATAAACTTGTTGCCTTATCCTGTCCCACGAGAATATATATTATTTGGGCCTGGTAATAGAAATCCCAGCTATGATGACCTTGCAAATCAGGTTGCACTAAATAACTATGATGCAGCTGTTGGTGACGTTACAATTGTCCCAAACAGGACAAGGTATTTGGATTTTACTCAACCTTACATGGAATCAGGCCTGGTTGTTGTTGTTCCTGTCAAGGAGATCAAATCAAGTCCTTGGTCTTTCCTCAAGCCCTTCACTGCTCAAATGTGGTGTGTCACTGGTGCCTTTTTTATTTTTGTGGGAACCGTAATATGGATTCTTGAGCACCGGCACAACCCAGAGTTCCGTGGAAGACCGAAGAAACAACTGATGACAGTCTTCTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGAGAGAACACAGTGAGCGGTCTTGGGAGATTGGTTCTAATCATATGGCTTTTTGTGGTGTTAATTATCAATTCGAGCTACACAGCTAGCTTAACATCCATCCTCACGGTGCAGCAACTATCATCACAAATTGAAGGAATTGACAGCTTGATCTCAAGTACTCAACCAATAGGAATTCAAGAAGGTTCATTTGCACGCAAGTATTTGACAGAGGAACTCAATATACAACCATCAAGGATAGTTACGTTGAAAAATATGGAGGCATATATTGATGCCCTTGAGCGTGGACCAAAAGATGGAGGCGTTATGGCCGTTGTTGATGAGCTTCCTTATATTGAAGTCTTAATGTCAAGTACCAGCTGTAAGTTCAGAACCGCATTCCAGAGGGACTCTCCCCTTGCTGTTGACATGTCAACTGCCATTCTTCAACTCTCCGAGAATGGTGACCTGCAAAAGATCCATGACAAATGGCTTTTAAAACATGATTGTTCTATAGAAGATAGTAGTGCTGATGTAAATAAACTATCTCTCAGTAGTTTCTGGGGTCTCTTTCTTATATGTGGCATTGCATGTCTCCTTGCTTTGATTGCATTTTTCATTAGAGTGCTGTGTCAATATACCAAATTCAACCCAGAACAACCTGAGCAAGATGATGAGGAAATTTCACCAGACAGGCCTCCTAAACGTAAAGGGCCATTCCGATCCTCTACTAGTTTCAGGGATTTGATGTATTTTGTGGATAAGAAAGAGAAAGAAATCAAAGAGATACTCAGGCAGAAGCGTAAGAAAAGGAGACGCAGCCTAAGCGAAGATGGCCAATCTAGCTCATCCGCCTAAGGAGCCATGTACATTTTTGTTAGTTTCTTCTTTCATTTCTCTTATTTAGGCCATACCCCAGTATTGACACAAAATTGTCAACATTGGAATATTTAAATTTCTACCTTCTTGGATAGGGAACTATGGCTGTAAGATTATTATTAACACAATATAAAGAGAAGAATAAACAAG 5619 0.4081 VYGVHLYPSFSNLQLSYSRLLEWEWDGIGLKFVVLHLLIWMWIFGVAHCRRPDSVNIGVVFAFDSVIGRVAKEAMEMAVSDVNMDPTVLEKGVAAIIGLQSSAGAHTVSQIADALQVPLVSYAATDPTLSSLQFPFFIRTTQSDLAQMTAMADLIDFNGWKEVIAVFLDDDYGRNGISALNDQLEKRRLKISYKLPLSIKFDLDEITNLLNQSKVFGPRVYVVHVNPDPRLRIFSIAQKLQMMTKDYVWLVTDWLSATLDSLFPVNRTSFNVLQGVVGLRQHIPNSKKERAFVSQWKKMQNEGLINTSLNSYGYYAYDTVWAVARSIDKFIKIHNNITFSLPDNYNLSHTTEGIGIQLDKLKIFAGGSDLVNILLQSNFTGVSGQVQFNSDRNIYSGGYDIINVNQMGITRVGFWSNYSGFSVVQPEALKKREHNRFSHDQKLGNITWPGGMTDRPRGWVIADYTKPLRIGVPKRASFVEFVTELSDSHQIQGYCIDVFKKALEFIPYEVPFVFKPFGNGNENPNYDTLVKMVDENVYDAVVGDIAIVTNRTKIVDFSQPFASSSLVIVAPINKGGSNAWVFLKPFTAEMWCVTAASFIVVGMVIWILEHRVNNDFRGPPKKQLVTMLMFSLSTLFKKNQEDTVSSLSKMVMIVWLFLLMVITASYTANLTSILTVEKLSSPITGIDSLIASNWPIGYQVGSFAYSYLADNLYVAKSRLVPLGSPEEYAMALQKGPMGGGVAAIVDELPYVELFLSKETDYGVIGQPFARSSWGFAFQRESPLAFDMSTAILKLSEHGDLQKIHKNWFCKMGCPGERTSNSKPDQLHLLSFWGLYLSSGVVALAALVLFLLRMIRQYARFKQKQKDIASSSSEPSGIHSSQVLWFTRHGRMFEGRVLYLLVLFLWIPTEVVVGRTRTTVTNSTISSTSRVLSVGALFTFNSVIGRSAKAGLMAAVEDLKANSSVLPGIKLELILHDTNCSGFAGTMEALKLMEDEVIAAIGPQSSGIAHIVSHVVNELHVPLVSFGATDPSLSSLQYPYFVRTTQSDYYQMYAIADLVDYYRWREVIAIYVDDDNGRNGISVLGDALAKKRGKISYKAAFPPGALKKDISDLLNRVNLLESRVFVLHVNPETGLSIFSLAEKLGMMNSGYVWIATDWLASVLDSLDPVDPHTVNLLQGVLVLRHHTPDTNEKKSFFSRLKKLKDKETPSFNSYALYAYDSVWLVAHALDAFLKQGGVVSFSSDTRLNNTNGSMLNLQSLRVFGEGPTFLQTTLRTNFTGLTGQVQFDMEKNRIHPAYDILNIGGSGMRRIGYWSNYSSLSVVAPEILYKKPRNTSTSSQQLYGVIWPGETAAKPRGWVFPNNGKPLRIAVPNRVSYLQFVAKDKNPPGVRGYCIDVFEAAINLLPYPVPREYILFGPGNRNPSYDDLANQVALNNYDAAVGDVTIVPNRTRYLDFTQPYMESGLVVVVPVKEIKSSPWSFLKPFTAQMWCVTGAFFIFVGTVIWILEHRHNPEFRGRPKKQLMTVFWFSFSTMFFSHRENTVSGLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGIQEGSFARKYLTEELNIQPSRIVTLKNMEAYIDALERGPKDGGVMAVVDELPYIEVLMSSTSCKFRTAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKHDCSIEDSSADVNKLSLSSFWGLFLICGIACLLALIAFFIRVLCQYTKFNPEQPEQDDEEISPDRPPKRKGPFRSSTSFRDLMYFVDKKEKEIKEILRQKRKKRRRSLSEDGQSSSSA 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02903 1815 FunFam Glutamate receptor 1361 1477 - -
Pste3g02903 1815 CDD PBP1_GABAb_receptor_plant 56 424 IPR044440 -
Pste3g02903 1815 Gene3D - 465 578 - -
Pste3g02903 1815 Pfam Ligand-gated ion channel 809 837 IPR001320 GO:0015276|GO:0016020
Pste3g02903 1815 CDD PBP1_GABAb_receptor_plant 932 1323 IPR044440 -
Pste3g02903 1815 Pfam Receptor family ligand binding region 91 405 IPR001828 -
Pste3g02903 1815 Pfam Receptor family ligand binding region 953 1303 IPR001828 -
Pste3g02903 1815 Coils Coil 1783 1803 - -
Pste3g02903 1815 Gene3D - 88 397 - -
Pste3g02903 1815 Gene3D - 579 707 - -
Pste3g02903 1815 Gene3D - 1477 1600 - -
Pste3g02903 1815 Gene3D - 952 1294 - -
Pste3g02903 1815 Pfam Bacterial extracellular solute-binding proteins, family 3 1421 1696 IPR001638 -
Pste3g02903 1815 FunFam Glutamate receptor 1046 1203 - -
Pste3g02903 1815 Pfam Ligand-gated ion channel 1697 1728 IPR001320 GO:0015276|GO:0016020
Pste3g02903 1815 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 933 1756 IPR015683 -
Pste3g02903 1815 SUPERFAMILY Periplasmic binding protein-like II 1342 1696 - -
Pste3g02903 1815 Gene3D - 1046 1318 - -
Pste3g02903 1815 MobiDBLite consensus disorder prediction 1750 1773 - -
Pste3g02903 1815 Gene3D - 1361 1476 - -
Pste3g02903 1815 Gene3D - 757 815 - -
Pste3g02903 1815 FunFam Glutamate receptor 1662 1694 - -
Pste3g02903 1815 FunFam Glutamate receptor 1477 1607 - -
Pste3g02903 1815 Pfam Bacterial extracellular solute-binding proteins, family 3 469 808 IPR001638 -
Pste3g02903 1815 CDD GluR_Plant 466 808 - -
Pste3g02903 1815 FunFam Glutamate receptor 463 579 - -
Pste3g02903 1815 Gene3D - 143 421 - -
Pste3g02903 1815 FunFam Glutamate receptor 579 717 - -
Pste3g02903 1815 MobiDBLite consensus disorder prediction 1796 1815 - -
Pste3g02903 1815 SUPERFAMILY Periplasmic binding protein-like I 927 1358 IPR028082 -
Pste3g02903 1815 MobiDBLite consensus disorder prediction 1750 1772 - -
Pste3g02903 1815 CDD GluR_Plant 1364 1695 - -
Pste3g02903 1815 FunFam Glutamate receptor 143 315 - -
Pste3g02903 1815 SUPERFAMILY Periplasmic binding protein-like II 446 808 - -
Pste3g02903 1815 SMART GluR_14 467 810 IPR001320 GO:0015276|GO:0016020
Pste3g02903 1815 SMART GluR_14 1367 1697 IPR001320 GO:0015276|GO:0016020
Pste3g02903 1815 FunFam Glutamate receptor 705 812 - -
Pste3g02903 1815 Gene3D - 1601 1698 - -
Pste3g02903 1815 SUPERFAMILY Periplasmic binding protein-like I 47 450 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02903 Pste-Chr3 21806652 21822425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02903 50 775 Ion Channels AT1G05200 48.541 0.0 738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02903 3 21806652 21822425 Pste3g02903 3 21806652 21822425 ECH
Pste1g03107 1 13988508 13994688 Pste3g02903 3 21806652 21822425 PCT