Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02890 CAAGGATGAAATGGAAACATTTTAAAGAAATTAGACAAAGAACGAGAAAAAAAAAAAGCATTGTGAGAGAATTGGTGGGTTGCTTGCCTTGCCTTGGTTCATTGTGTCCTTTGGCCGGCCAAAGAAACAACAATTATCGCCGTTTTAGTGTCTGCTTCGGACATCTCTCTGTCACTTTGTTTGATTTGATAATCCAACATGAACGACCTTCTCACAGATTCATTTGTCGGCGAGGCTGGTAATGGCCAGCCTTCTAGACAAACTGATATTGAAATGGGACAGATTCCGAGAAGCAACTCTGATATGGGAATGGAAGCATTTAATAAGCAGATCCACGAAGCTGATAAACAGATTGATAAACTCTCTGTGCTACTTCAAAAGCTAAAGGAAGCTAATGAGGAATCAAAAGCTGTCACAAAAGCCTCTGCCATGAAAGAACAAGGAATCAAATCTGTTACTAAAGCATCTGCAGTAAAAGATGTGTACAATGCAATGCTACATGTTTTGTTGAAACCATCCATTTTGAATTTGGTTGTAAGATTTTCTGGAAAACTGAATACACTTTACAAGGCTAATAAACCTGTAACATTACTTTCAGCTATCAAAAAGAGGATGGAGAAAGACATTGATGAAGTTGGGAAGATTGCTCAGGGTGTCAAAACAAAAATAGAGGCTATAAACAGAGATAACCTATCTAACAGACAAAAGCCTGGCTGTGAGAAGGGAACTGGTATTGACAGAGCAAGAATGAATATGACAAATGCCTTAACTAAAAAATTCAAGGATCTAATGACAGAGTTCCAGACTCTAAGACAAAGAATACAAGATGAATATCGAGAGGTTGTGGAGAGAAGAGTTATTACAGTCACGGGAACTAGGCCAGATGATGAGACAATTGATCGCCTGATAGAAACTGGAAATAGCGAACAAATCTTCCAGAGAGCAATTCTAGAAGCTGGTCGAGGACAGGTTGTAAACACAGTAGAAGAAATACAGGAAAGACATGATGCTGTCAAAGAAATTGAGAAAAAGCTTCTTGATTTACACCAGATCTACCTTGACATGGCAGTCTTAGTTGATGCTCAAGGAGAAATTTTAGATAACATTGAAAGTCAGGTCAACAATGCAGTCGATCATGTCCAGAGAGGGACAACTGCACTTCAAAATGCTAAGAAACTCCAGAAGAACTCACGAAAATGGATGTGCATTGCCATCTTTATCCTGTTGATGATAGTAGCTTTCATAGTTGTGGCCGTTCTCAAACCTTGGAAGAGTAGCTAGGGCGCTTGAGTGTGGCCCTTTACCTTTTGTTCATACATAAGAGTTGACTTGATTGGGAAAGCATGTGCATGTGTGTCAAAGGGACATCTTAGAGCAGGATTTTCATTTTTAAGTCTGTGTTTTGTATGATTGAGATGCTTGTTTTGTGTGGCGTGACTGTTTGCTGACTATACATTGGCCTGTCTAACGATATAAATTCATATTCTTTCTAGTCTCCAAAAGTTTATCAGATGTCTCATATTCCCATGTACTATTCTATAAGACCATAAAGC 1553 0.3883 MNDLLTDSFVGEAGNGQPSRQTDIEMGQIPRSNSDMGMEAFNKQIHEADKQIDKLSVLLQKLKEANEESKAVTKASAMKEQGIKSVTKASAVKDVYNAMLHVLLKPSILNLVVRFSGKLNTLYKANKPVTLLSAIKKRMEKDIDEVGKIAQGVKTKIEAINRDNLSNRQKPGCEKGTGIDRARMNMTNALTKKFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDRLIETGNSEQIFQRAILEAGRGQVVNTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVNNAVDHVQRGTTALQNAKKLQKNSRKWMCIAIFILLMIVAFIVVAVLKPWKSS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02890 360 CDD SynN 107 249 IPR006011 GO:0016020
Pste3g02890 360 Pfam SNARE domain 298 350 IPR000727 -
Pste3g02890 360 CDD SNARE_syntaxin1-like 261 322 - -
Pste3g02890 360 SMART tSNARE_6 257 324 IPR000727 -
Pste3g02890 360 PANTHER SYNTAXIN 79 342 IPR045242 -
Pste3g02890 360 Gene3D - 255 355 - -
Pste3g02890 360 Pfam Syntaxin 125 297 IPR006011 GO:0016020
Pste3g02890 360 Gene3D - 38 220 - -
Pste3g02890 360 SMART SynN_4 92 213 IPR006011 GO:0016020
Pste3g02890 360 MobiDBLite consensus disorder prediction 1 33 - -
Pste3g02890 360 FunFam Syntaxin 132 255 355 - -
Pste3g02890 360 SUPERFAMILY t-snare proteins 116 317 IPR010989 GO:0016020|GO:0016192
Pste3g02890 360 Coils Coil 38 75 - -
Pste3g02890 360 MobiDBLite consensus disorder prediction 12 33 - -
Pste3g02890 360 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 262 324 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02890 Pste-Chr3 21645238 21648982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02890 1 357 SNARE and Associated Proteins AT3G03800 52.661 1.04e-114 334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02890 3 21645238 21648982 Pste3g02890 3 21645238 21648982 ECH