Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02887 TTTTTGTGTCTTCATTCTTCAATATAACACACTTCCAATGGCCGACTCGGATCGCTCTTCTACTCAAACATCTACACATTCTTCTGATACAGGGAAGCGAGGGTCTTCCAAAGTTGAATTTTCTGAAGATGAGGAAACTCTTATCATCAGGATGTATAAACTGGTTGGGAACAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGAGGAAATAGAGAAGTATTGGACTTCCAGATTCTCGAATTCTAATAAGTGAAGTGCCAGAGTACTACGACTGGTGTTCAGGGTAGGAGCAAAAAGATTTTGGGTGCAAGATTAGTGTATGTTGTGGGACATAAACCGAAAAAGAAAAAGTTGGCCTTATTTTTATATCATTATATGTATTTGGATTGGCTATAAAAAACGGGCAGCAACTATAAAAGCTGGTTTGTGTAATATTTTTTTCTCCATCTTGAAATGTTGCTTATTGGTGTGATATTCTCCATCTTGAAATGTTACTCCATTGGTGGTTG 521 0.38 MADSDRSSTQTSTHSSDTGKRGSSKVEFSEDEETLIIRMYKLVGNRWSLIAGRIPGRTAEEIEKYWTSRFSNSNK 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02887 75 ProSiteProfiles Myb-like domain profile. 20 70 IPR001005 -
Pste3g02887 75 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 20 72 - -
Pste3g02887 75 FunFam MYB-like transcription factor 27 69 - -
Pste3g02887 75 SUPERFAMILY Homeodomain-like 25 72 IPR009057 -
Pste3g02887 75 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 74 IPR017930 -
Pste3g02887 75 MobiDBLite consensus disorder prediction 1 29 - -
Pste3g02887 75 Gene3D - 27 75 - -
Pste3g02887 75 CDD SANT 27 66 IPR001005 -
Pste3g02887 75 SMART sant 24 72 IPR001005 -
Pste3g02887 75 MobiDBLite consensus disorder prediction 1 19 - -
Pste3g02887 75 Pfam Myb-like DNA-binding domain 25 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02887 Pste-Chr3 21625570 21626789 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02887 20 71 MYB Transcription Factor Family AT5G14750 55.769 9.74e-17 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste3g02887 Myb_DNA-binding 2.3e-10 CL0123