Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02874 AATAATTGAGAACCATATAAAATTGATAGAGTAATAATATAAGTAGCATACGCAATTGAAGTAGAGACCTAGAGTGATATAGAGAAGTCAGAAGGAGAGAATAATGAGGTGTTATGGTTTAACCTTACCTGGAAGCGGAAGCGGAAGCGGAAGGGACCACTGCTTCTTTGTACCGAAGCTCTACCCTAGCAGGCCCATTAATCGAATCTCGTTTCCTAGGGCCACACTGAAAAATCAGGGTTTCACGGTGGACTTGAGTTTTTACGAGCTTTTGGGGATACCGGAATCGGGTTCCTTGACAGAGATTAAGACCGCCTACAAGCAACTCGCCCGAAAGTATCACCCGGACGTCTCTCCACCGGGTCGGGTCCAGGAGTACACCGAGAGGTTTATTCAGGTGCAGGAGGCTTACGAAACCTTGTCTGATCCCTCCCTCAGAGCCATGTACGATAACCACATCTCTAAGGGCGTTCACTTCGCTTTCAACGCTCGCCTACGCTCCAACTACCACCATCAGGTGGTTGAACAAAAAGTTGAATGGAAATCCAGGTGGCAATCTCAACTGTCAGGGCTGAAGAGAAGAAGTAACAGTAAAGATGGGGGAGAGAATATGTCCTGGGCAGCTCGTGTGCGCCAACAGAAAGAAGAAGAATTGTCAAGTGAATCTTGACTAAGATTGTCAAATGAATCTTGACTAAGATTTTGCTTAATTCTCCTTGCACGCTTTGTATATAAAACTGTACATCTCTACCTGCGTAGATCAAATCAGAAATAAATTATGTTGAGAGGATGTGTCATTGGCCCATTACTCAACTGTTTCCAGTGTGGTAACCAGTAACCACCGTATGCTGGAACAAAATAATTGCGTCTCCATGTTATTTTAGAGTGAGCTTGAGAG 898 0.4454 MRCYGLTLPGSGSGSGRDHCFFVPKLYPSRPINRISFPRATLKNQGFTVDLSFYELLGIPESGSLTEIKTAYKQLARKYHPDVSPPGRVQEYTERFIQVQEAYETLSDPSLRAMYDNHISKGVHFAFNARLRSNYHHQVVEQKVEWKSRWQSQLSGLKRRSNSKDGGENMSWAARVRQQKEEELSSES 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02874 188 Gene3D DnaJ domain 40 145 IPR036869 -
Pste3g02874 188 ProSiteProfiles dnaJ domain profile. 52 119 IPR001623 -
Pste3g02874 188 FunFam Chaperone protein dnaJ 20, chloroplastic 40 148 - -
Pste3g02874 188 SMART dnaj_3 51 111 IPR001623 -
Pste3g02874 188 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 49 183 - -
Pste3g02874 188 PRINTS DnaJ domain signature 54 72 IPR001623 -
Pste3g02874 188 PRINTS DnaJ domain signature 91 111 IPR001623 -
Pste3g02874 188 PRINTS DnaJ domain signature 72 87 IPR001623 -
Pste3g02874 188 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Pste3g02874 188 CDD DnaJ 53 108 IPR001623 -
Pste3g02874 188 MobiDBLite consensus disorder prediction 153 188 - -
Pste3g02874 188 Pfam DnaJ domain 53 116 IPR001623 -
Pste3g02874 188 SUPERFAMILY Chaperone J-domain 52 127 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02874 Pste-Chr3 21509303 21512051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02874 54 126 C2H2 Transcription Factor Family AT1G74250 43.421 1.08e-09 55.1