Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste3g02874 | AATAATTGAGAACCATATAAAATTGATAGAGTAATAATATAAGTAGCATACGCAATTGAAGTAGAGACCTAGAGTGATATAGAGAAGTCAGAAGGAGAGAATAATGAGGTGTTATGGTTTAACCTTACCTGGAAGCGGAAGCGGAAGCGGAAGGGACCACTGCTTCTTTGTACCGAAGCTCTACCCTAGCAGGCCCATTAATCGAATCTCGTTTCCTAGGGCCACACTGAAAAATCAGGGTTTCACGGTGGACTTGAGTTTTTACGAGCTTTTGGGGATACCGGAATCGGGTTCCTTGACAGAGATTAAGACCGCCTACAAGCAACTCGCCCGAAAGTATCACCCGGACGTCTCTCCACCGGGTCGGGTCCAGGAGTACACCGAGAGGTTTATTCAGGTGCAGGAGGCTTACGAAACCTTGTCTGATCCCTCCCTCAGAGCCATGTACGATAACCACATCTCTAAGGGCGTTCACTTCGCTTTCAACGCTCGCCTACGCTCCAACTACCACCATCAGGTGGTTGAACAAAAAGTTGAATGGAAATCCAGGTGGCAATCTCAACTGTCAGGGCTGAAGAGAAGAAGTAACAGTAAAGATGGGGGAGAGAATATGTCCTGGGCAGCTCGTGTGCGCCAACAGAAAGAAGAAGAATTGTCAAGTGAATCTTGACTAAGATTGTCAAATGAATCTTGACTAAGATTTTGCTTAATTCTCCTTGCACGCTTTGTATATAAAACTGTACATCTCTACCTGCGTAGATCAAATCAGAAATAAATTATGTTGAGAGGATGTGTCATTGGCCCATTACTCAACTGTTTCCAGTGTGGTAACCAGTAACCACCGTATGCTGGAACAAAATAATTGCGTCTCCATGTTATTTTAGAGTGAGCTTGAGAG | 898 | 0.4454 | MRCYGLTLPGSGSGSGRDHCFFVPKLYPSRPINRISFPRATLKNQGFTVDLSFYELLGIPESGSLTEIKTAYKQLARKYHPDVSPPGRVQEYTERFIQVQEAYETLSDPSLRAMYDNHISKGVHFAFNARLRSNYHHQVVEQKVEWKSRWQSQLSGLKRRSNSKDGGENMSWAARVRQQKEEELSSES | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste3g02874 | 188 | Gene3D | DnaJ domain | 40 | 145 | IPR036869 | - | |
Pste3g02874 | 188 | ProSiteProfiles | dnaJ domain profile. | 52 | 119 | IPR001623 | - | |
Pste3g02874 | 188 | FunFam | Chaperone protein dnaJ 20, chloroplastic | 40 | 148 | - | - | |
Pste3g02874 | 188 | SMART | dnaj_3 | 51 | 111 | IPR001623 | - | |
Pste3g02874 | 188 | PANTHER | CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC | 49 | 183 | - | - | |
Pste3g02874 | 188 | PRINTS | DnaJ domain signature | 54 | 72 | IPR001623 | - | |
Pste3g02874 | 188 | PRINTS | DnaJ domain signature | 91 | 111 | IPR001623 | - | |
Pste3g02874 | 188 | PRINTS | DnaJ domain signature | 72 | 87 | IPR001623 | - | |
Pste3g02874 | 188 | ProSitePatterns | Nt-dnaJ domain signature. | 96 | 115 | IPR018253 | - | |
Pste3g02874 | 188 | CDD | DnaJ | 53 | 108 | IPR001623 | - | |
Pste3g02874 | 188 | MobiDBLite | consensus disorder prediction | 153 | 188 | - | - | |
Pste3g02874 | 188 | Pfam | DnaJ domain | 53 | 116 | IPR001623 | - | |
Pste3g02874 | 188 | SUPERFAMILY | Chaperone J-domain | 52 | 127 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste3g02874 | Pste-Chr3 | 21509303 | 21512051 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste3g02874 | 54 | 126 | C2H2 Transcription Factor Family | AT1G74250 | 43.421 | 1.08e-09 | 55.1 |