Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02868 ATGATTTTAAGGTTTCTGGAATTGAGTTCCATCTTGGAGCCTGGTAGGCTGCCCAAAACAGACAAAGTTGCAATATTGAGTGATGCGGCTCGAGAGGTAGTTCAATTGAGAAATGAAGCGGAGAGGCTGAAGGAAATGAATGATGAATTGCAAGCAAAAGTTAAAGAATTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGAATAGGCTGAAGGAAGAGAAAGAGAAGTTGGAGCAGCAGGTAAAATTAGGAAATGTACAGCCCAGTTTTCTCCCTCAAGCCCCAGCTGCTAAAGGACAAGTTGGTAGCCACAAGCTGATACCTTTCATTGGATACCCTGGAATTGCCATGTGGCAGTTTATGCCCCCTGCCGCACTTGATACATCAAAGGATCATCTGCTTCGACCTCCAGTTGCATAAAGTGGTTAGCAATTGCATCCACTTCTTTGTTTGTTGTATGTGTTCTTTACTTGTGTTATATTTTTGTTTAAGTTATCCATCCTGTTTATTGTGTGTAAATCACTGGTGGAAAGTGTGCTCTGAGACTAGTTTATAAGATAAATATGTACTACTGTTGTCTAAACTATGATGAGAAAGTGCTACATGTAATGGCTACAAAGTGTGTCACATAATTAAAAATAAAAGTGAGTTTGAGTGATTCTTTGCTTGAATGTTTCCTTTTTTCTTGGTCCAGGTTCCAGAAAGGG 710 0.4 MILRFLELSSILEPGRLPKTDKVAILSDAAREVVQLRNEAERLKEMNDELQAKVKELKAEKNELRDEKNRLKEEKEKLEQQVKLGNVQPSFLPQAPAAKGQVGSHKLIPFIGYPGIAMWQFMPPAALDTSKDHLLRPPVA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02868 140 Coils Coil 26 88 - -
Pste3g02868 140 Gene3D - 25 86 - -
Pste3g02868 140 PANTHER BHLH TRANSCRIPTION FACTOR 4 140 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Pste3g02868 140 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 61 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02868 Pste-Chr3 21429629 21430500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02868 4 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 63.448 1.32e-60 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02868 3 21429629 21430500 Pste3g02868 3 21429629 21430500 ECH