Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02848 CGCGTAGTAGCAAATTCCTGGTTTTCTTCCTTTACCTCCCTTCTACTTGCCTGACCTTTTAGAAAGATCCGTTGCAAAATGGACGGAGCGCCTCCATCCGCCGCCGCCGCCGCTGCCGGAGGACCCGCGCCGTTTCTTCTTAAGACCTACGACATGGTCGACGATGCCTCCACCAACGACATCGTTTCGTGGAGCTCTAACAACAACAGCTTCGTCGTTTGGAACCCGCCCGAGTTCGCTCGCCTTCTTCTCCCGACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGCCAGCTCAATACCTACGGATTTCGAAAAATACATCCAGAGCGGTGGGAATTTGCTAATGATGAGTTTGTGAAAGATCAAAAGCATCTTCTTAAGAACATACATCGCAGGAAACCTATCCACAGTCATAGTCATCCTCCTGGTTCTCTTGTAGATCCAGAAAGGGCAGCATTTGAGGAAGAAATAGACAAACTTTCCCGTGAGAAAACTTCTCTTGAATCTAATTTTTATAGCTTCAAACAACGGCAGTCAACAGCAAAGCATCAGCTAGAAGATTTTCTGCAGCGATTAGATGGTATTGAGAAGAGGCAGACACACTTGCTGAACTTCTTTGAGAAGGCTCTTCAGAATCCTACTTTGGTTGAACATCTTTCACGAAAAATTGAGTCCATGGATTTATCTGCTTATAATAAGAAAAGGCGATTGCCTCAGGTTGATAACGTGCAACCAGTTGTTGAAAGTAGCTTTGTAGACAGTCCTAGCAATTTTAGAATGGAATTTGGAAATGTTTTCCATCAAGATTTCTCGAATAAACTCAGATTGGAATTGTCACCAGCCGTTTCAGATATGAACTTGGTGTCACGTAGCACACAGAGTTCAAATGAAGATGGGGAAAGCCCACAGAAAAAACTGCCTGAAGTAGAACCAAAAGTAGTGCAGACAAGAACAGCTCTTACGTTTGCACCTGAAACATTGGAGCTTGCAGATACTGGGGCTTCTCTTATTTTTAAGATGGATTCATGTTTATCACGAAGAGCAACGACTACTGAGAGCTCAAAACTGATCTCTTTGGAGCCAAGTAGTGAAGAAGGTGACAGTCATATATCTTGCCAACTGAATTTAACTCTGGCTTCTTGTCCATTGCAAGTCAACAGAAATTCATACTCGGCCAGATCACCCCAAATTGACTGTCAAGAAATTGGCAAATTAGCAGAATCAAGATTTTTTGCCAATGGTAAGGAATCTGATAGTGGTGTTTCCTCAAACCGAAATGTAGGTGCTGAGGCTACCAATTTAACTTCACCACAGGAAGCTCCAAGTAACAACCAAGTTACCCCAGCTCCTCCAGACAGAGTGAATGATGTTTTCTGGGAACAATTTCTTACTGAAAGACCAGGTTGTTCTGACAATGAAGAGGCAATATCCAACTACCGAGCAAACCCATATGATGAACAAGAAGATGGACGGTCAGTTCATGGAATCTCTAGAAACATTAAGAACATTGATCAACTCACACTTTGAGTTGAGAATGCTGTTTTGGAGAACAGCTTTATTATTGTTATATGAATTTTTCATGACAAATATACAATTTGATTTAAAAATTAACAGTTGAAACTATTCTAGCTTACTAGTTCATGTCTCATGTGAAAAACCCGAAACCTTACCGGTACTCGCCTTGGGGACTGATGGATACAATGTTAATTAACTGCTTGGCAGTGTTGTATATATTCTATAGTTCTATTTGGCTTTCAAACGTATCACTGTAAACTTAAACTTTTTATTGTGGAGTTTT 1804 0.4152 MDGAPPSAAAAAAGGPAPFLLKTYDMVDDASTNDIVSWSSNNNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDEFVKDQKHLLKNIHRRKPIHSHSHPPGSLVDPERAAFEEEIDKLSREKTSLESNFYSFKQRQSTAKHQLEDFLQRLDGIEKRQTHLLNFFEKALQNPTLVEHLSRKIESMDLSAYNKKRRLPQVDNVQPVVESSFVDSPSNFRMEFGNVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGESPQKKLPEVEPKVVQTRTALTFAPETLELADTGASLIFKMDSCLSRRATTTESSKLISLEPSSEEGDSHISCQLNLTLASCPLQVNRNSYSARSPQIDCQEIGKLAESRFFANGKESDSGVSSNRNVGAEATNLTSPQEAPSNNQVTPAPPDRVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQEDGRSVHGISRNIKNIDQLTL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02848 484 MobiDBLite consensus disorder prediction 408 426 - -
Pste3g02848 484 SUPERFAMILY "Winged helix" DNA-binding domain 15 108 IPR036390 -
Pste3g02848 484 Gene3D - 13 109 IPR036388 -
Pste3g02848 484 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 273 IPR027725 -
Pste3g02848 484 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste3g02848 484 FunFam Heat shock transcription factor 1 12 109 - -
Pste3g02848 484 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste3g02848 484 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste3g02848 484 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste3g02848 484 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste3g02848 484 MobiDBLite consensus disorder prediction 264 288 - -
Pste3g02848 484 Coils Coil 126 146 - -
Pste3g02848 484 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste3g02848 484 MobiDBLite consensus disorder prediction 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02848 Pste-Chr3 21212247 21217602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02848 1 484 HSF AT4G13980 54.637 2.09e-173 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste3g02848 HSF_DNA-bind 2.1e-31 CL0123