Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02839 ATAAAGAAGAAAAGAAAAAATGGTAGCGCTGATGCAGGTCAAGTGAATGGGAGTGTAGGGACGAACCGCGTAGACTTTGACGGCATGAGAACTGATGAGGTTATGTTCTCCTCCTTTTCCCTTGTTGTCTCTTTGGTGCTATGCTTCCAACACTGTTCAGCTGCAGATATTTTGAATGTTGGGGAGAAGATAACTGAGGACTCAGCGGGTAACCTTGTTTCATTTAACAGCACATTTGAGCTTGGCTTCTTTGTTTTAAACAGTAGCACAAGTGTAAAAAGATACTTGGGGATATGGTATCACGGGTTGGAACCACAAACAGTGGTATGGGTGGCCAATAGAGAAAAACCCGTTTTAGACTCCGGTGGCGTTTTTACAATCTCAGAGGATGGAAATCTGGTGGTAGAAGTTGCATCAAATAGGTATTGGTCCTCTGAACTGAAAGCATCATCATCCACGAACACAACATTGAAGCTGCTAGACTCAGGGAACCTAGTACTAATGGACAACAACGGTGGAACCAGTTACTTGTGGCAGAGCTTCCTAAACCCAACAGACACGTTCCTTCCTGGCATGAAAATGGATGCACGTTTATCACTGACTTGTTGGAGAAGCGCCACTGACCCAGCACCTGGGAACTTCATCTTTAAGCTCACTCAAGAGGCAGACAAACAAAGCTTCGCTGTGCAAAAACTATCACTATCCTACTGGGCACTCGATGCACTCGACACAGATGCGGAATCCCAAGTCGTATCTGATTTGTTGAACAACGCCACCTTGGCTACTAGACTGTACAATTTTTCAGACAAAACACTCTTTGTATGGCAACCTTACAGTTACGAAAAATCAAGGTTAGTATTGAATTCTGGCGGGGAGTTACAATTTCTCAAGTGGAACAAGAAACGGACTCAATGGGATAAGCACTGGTCTGGGCCAGCTGACAAGTGCAACATACATGATTATTGCGGGAGCTTCGGAATCTGTAACAACAAAAATCGGATTCCCTGCAGATGCTTGCCAGGATTCACTCTGAGTAATGATCATTCTGTTGGAGAATTCCAGATCCAAGGGTGTATAAGAAAATCAACCTCGTGTATCAACACGAACGTGACATTCCTGAACTTAACCAACATAAAATTGGCCAACCCAGACCGAGAATTTAATACAGCAACAGAGGCAGAATGCCAATCCAATTGCATTAACATGTGTCCCGACGCCCAGTGCCAGGCATATTCTTATAATACGTCTACATATGCTGATCGTAGTTCCTATACATGCAAGATATGGACACGCCCTTTACCTTCTCTTCCAGAGGATTACCCTCGTGGTCGTGATCTTTCTATCCTCATTAAGACATCAGATATAGCACCAACTGCAAAATCCTGTGAACCTTGCGGTACTTATGGGATTCCTTATCCACTAAGTACCCAGCCAAACTGTGGAGATCCCATGTACAACTACTTCAATTGCACCAAATCGACAGGTGAAGTTCGCTTCATGATGCGGGGACAAAAATCATTCCAAGTTACTTGGATCAATGAAGATGCCAGAATGTTTTTCGTTCAAACAGATAATTTATTTTCGTGTAATTCCAGTTCCAACTATGAAATTGACCATGATTTTCCATTTAATGTAACCGAATGCATTGAAAATGTTGGCATGGAAATCAATTGGCTGCCAGCCCCAGAACCGCCCTGTAGTAAGTCTACAGACTGCTTGAATTGGCCCAATTCGACATGCAGTGCAACAAGTGAAGGAAGAAGCAGGTGTCTTTGTGATGCAAACTATAAGTGGAATAACTCAAACATGAGTTGTATCACCCAAGAAGTGCCTTCAAGAAACCATTCAACCAAAAATCTGGCACTGATTCTTCTTACATTGATTCTTAGCGGCACGACTATTCTGGCATGCATAATAGCATTCACCATTGTTCGGAGAAAGAAAAAATCCCGTAAACTTGATCGGGCAAACACCCAAATTCAGGAGAGCCTGTGTGAGAGTGAAAAACAAGTGAAAGGTTTGATTGGCTTGGGAAGTTTAGGAGAAAAAGACATTGAAGGGATTGAAGTACCCTGTTATAGTTTCGCAAGCATTCTAGCAGCTACAGATAATTTCTCAAATTCTAACCAGATTGGAAGAGGAGGATATGGACCCGTCTATAAGAGACTTTCAAGTGTTTCTACTCAAGGATTACAAGAATTTAAAAATGAGATTATTTTCATTGCTAAACTTCAACATCGAAACCTTGTAAGACTTAGGGGCTACTGTATAAAAGGAGATGAAAAAATCTTACTCTATGAATACATGCTGAACAAGAGCTTGGACTCATTTATATTTGATCGGACACGAACTTTACTCTTGGATTGGCCAATGCGATTTGATATTATTGTTGGCATTGCACGTGGCATGCTTTATCTTCACCGAGACTCTAGATTGAGAGTGATACATAGAGACTTGAAAACTAGCAACATTCTTCTAGATGAAGATATGAATCCAAAAATATCAGACTTTGGCCTTGCTAAAATATTTGGAGGAAAAGAAACTGAAGCCAGTACACAGAGAGTAGTGGGAACCTATGGGTATATGGCCCCAGAGTATGCTTTGGATGGATTTTTTTCAATCAAATCAGATGTTTTTAGTTTTGGTGTAATCCTTTTAGAGATTCTCAGTGGAAAAAAGAACACCGGTTTCTATCGATCCAAACAAATTTCTAATCTAATGGGTTATGCATGGACGTTATGGACAGAGAATAAGCTACTATATTTGATGGATCCATCTCTGGGTGAAACTTGCAATGAAAATCAATTCATGAAGTGCGCAATTATTGGATTATTATGCATACAAGATGAACCAAGTGATCGACCCACTATGTCAAATGTTTTGTCAATGCTTGACATAGAGACAATAACCATGCCAATTCCCACGCAACCAACTTTTTTTGTGAACAAGCAACTTTATAGCTCAACTTCTTATAGTAAACCAGAAATAAATTTGCAATTTGAGAGTAGTTATCAAGAAGGTCGATAACCACGATGGAATCTATAGTTAGAATACATTAAGAATATTTAATGATGTTTTAATTGTTTTGCAGAATAAATTAGAGTAATTTTTTGTTATGG 3119 0.4027 IKKKRKNGSADAGQVNGSVGTNRVDFDGMRTDEVMFSSFSLVVSLVLCFQHCSAADILNVGEKITEDSAGNLVSFNSTFELGFFVLNSSTSVKRYLGIWYHGLEPQTVVWVANREKPVLDSGGVFTISEDGNLVVEVASNRYWSSELKASSSTNTTLKLLDSGNLVLMDNNGGTSYLWQSFLNPTDTFLPGMKMDARLSLTCWRSATDPAPGNFIFKLTQEADKQSFAVQKLSLSYWALDALDTDAESQVVSDLLNNATLATRLYNFSDKTLFVWQPYSYEKSRLVLNSGGELQFLKWNKKRTQWDKHWSGPADKCNIHDYCGSFGICNNKNRIPCRCLPGFTLSNDHSVGEFQIQGCIRKSTSCINTNVTFLNLTNIKLANPDREFNTATEAECQSNCINMCPDAQCQAYSYNTSTYADRSSYTCKIWTRPLPSLPEDYPRGRDLSILIKTSDIAPTAKSCEPCGTYGIPYPLSTQPNCGDPMYNYFNCTKSTGEVRFMMRGQKSFQVTWINEDARMFFVQTDNLFSCNSSSNYEIDHDFPFNVTECIENVGMEINWLPAPEPPCSKSTDCLNWPNSTCSATSEGRSRCLCDANYKWNNSNMSCITQEVPSRNHSTKNLALILLTLILSGTTILACIIAFTIVRRKKKSRKLDRANTQIQESLCESEKQVKGLIGLGSLGEKDIEGIEVPCYSFASILAATDNFSNSNQIGRGGYGPVYKRLSSVSTQGLQEFKNEIIFIAKLQHRNLVRLRGYCIKGDEKILLYEYMLNKSLDSFIFDRTRTLLLDWPMRFDIIVGIARGMLYLHRDSRLRVIHRDLKTSNILLDEDMNPKISDFGLAKIFGGKETEASTQRVVGTYGYMAPEYALDGFFSIKSDVFSFGVILLEILSGKKNTGFYRSKQISNLMGYAWTLWTENKLLYLMDPSLGETCNENQFMKCAIIGLLCIQDEPSDRPTMSNVLSMLDIETITMPIPTQPTFFVNKQLYSSTSYSKPEINLQFESSYQEGR 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02839 1008 Pfam S-locus glycoprotein domain 269 343 IPR000858 GO:0048544
Pste3g02839 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Pste3g02839 1008 Pfam D-mannose binding lectin 107 196 IPR001480 -
Pste3g02839 1008 SMART ntp_6 367 450 IPR003609 -
Pste3g02839 1008 SUPERFAMILY Protein kinase-like (PK-like) 690 990 IPR011009 -
Pste3g02839 1008 ProSiteProfiles PAN/Apple domain profile. 365 453 IPR003609 -
Pste3g02839 1008 Pfam Protein tyrosine and serine/threonine kinase 727 964 IPR001245 GO:0004672|GO:0006468
Pste3g02839 1008 FunFam Receptor-like serine/threonine-protein kinase SD1-8 50 181 - -
Pste3g02839 1008 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 143 987 - -
Pste3g02839 1008 SMART serkin_6 705 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02839 1008 CDD STKc_IRAK 711 965 - -
Pste3g02839 1008 Gene3D Transferase(Phosphotransferase) domain 1 769 971 - -
Pste3g02839 1008 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 208 IPR036426 -
Pste3g02839 1008 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 769 972 - -
Pste3g02839 1008 Coils Coil 646 666 - -
Pste3g02839 1008 Gene3D - 50 181 IPR036426 -
Pste3g02839 1008 ProSiteProfiles Protein kinase domain profile. 705 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02839 1008 Gene3D Phosphorylase Kinase; domain 1 682 768 - -
Pste3g02839 1008 CDD B_lectin 72 184 IPR001480 -
Pste3g02839 1008 SMART blect_4 65 184 IPR001480 -
Pste3g02839 1008 ProSiteProfiles Bulb-type lectin domain profile. 57 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02839 Pste-Chr3 21133686 21139103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02839 610 981 Receptor kinase-like Gene Family AT4G05200 46.094 4.93e-112 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02839 PK_Tyr_Ser-Thr 2.1e-38 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02839 3 21133686 21139103 Pste3g02839 3 21133686 21139103 ECH