Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02835 CGCCCATTCAACCATACGGTACCAACAGAAGAGAGAGACTAGAGAGAAAAGAATTGGACAAAAAAAGAAGCAAAGAAGAAGAGAGATAAGAAAAGCAGAAGAGTTGTGAATCAGAAATCATTGGTTTTGAGATGAAGAACTGCGAGCTGTGCAAGGTTCCGGCTCGGACCTTCTGTGAGTCGGACCAGGCCAGCTTATGCTGGGACTGCGACGCCAAGGTGCACGGAGCCAACTTCCTTGTCGCCAGACACACGCGCACGCTCCTCTGTCACGCGTGCCAGTCACCCACGCCGTGGAAGGCCTCCGGCGCCTCCCTCGGCAACACCGTTTCCCTGTGCGAGAGGTGCGCCGGCGGAACCACCGAACAGGGCCAAGAGAGCCATGCCACCAATGACGACGACATAGACACCGATGAAGAAGATGACGACAACGACTACGACACTGACGACGACCTCGCCGCCGATGAGGACGGAGACAACCAGGTTGTTCCTTGGTCCTCCGCGCCGCCGCCTCCGCCGCCAGCCCCGAGCTCTTCCAGCAGCGAAGACTCTCTTAGCCGGTGCAACAACGTCGACGAGGATGTTTCCACCACATTCAAACGACGTCGTGAGGATATTGATTTTCAGTGTTCGAATTCAAATAATTGGGGATATGAACGGAGTGAAGTAGAAAGAGAAAGTTGGTTGGTTCGGGTGCGGCGGCGAACCGCCGTGGAGGGTGGCGATGTGGCGTTTGAGCGACGGAGTGCCGGAGCAGCTTTTCCGTACGGTTGCTATGATGATAGAGCATCCGAAGACGTTTGATCTGAAGGGACATGGGGAATCTCAGCCGCGTGATCAACGGGCCGTACCATTGGATATTATTTATGGGCTCTTTGATGATTAACTTCCTCTAACAGCACTCGGGTTTTGATAATGACAATCAAGTGTATCGATCTTTTTTATTGTTATTGTTATTATAATTATTTTTAACATTTTGAGGATCAAGGTTGTGGGGAGGGTGATGTAACTTTTTACTTCTATTTTGTTGTTGTAAAATATAATTTATTTTTTTTTTCTGTTTATAAGTAGGTGAGGATGCTTTAAGTTATGATGAACAGATAGGAGAAATCACGAAGCACATGAATGTGATGCCTGATTCATGATATCAAATTCTCTGACTATGCCTATCTT 1172 0.4881 MKNCELCKVPARTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHACQSPTPWKASGASLGNTVSLCERCAGGTTEQGQESHATNDDDIDTDEEDDDNDYDTDDDLAADEDGDNQVVPWSSAPPPPPPAPSSSSSEDSLSRCNNVDEDVSTTFKRRREDIDFQCSNSNNWGYERSEVERESWLVRVRRRTAVEGGDVAFERRSAGAAFPYGCYDDRASEDV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02835 223 SMART bboxneu5 1 45 IPR000315 GO:0008270
Pste3g02835 223 MobiDBLite consensus disorder prediction 77 146 - -
Pste3g02835 223 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 173 - -
Pste3g02835 223 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Pste3g02835 223 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Pste3g02835 223 CDD Bbox1_BBX-like 4 45 - -
Pste3g02835 223 MobiDBLite consensus disorder prediction 88 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02835 Pste-Chr3 21084679 21086111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02835 2 129 C2C2-CO-like Transcription Factor Family AT4G27310 41.212 1.31e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste3g02835 zf-B_box 1e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02835 3 21084679 21086111 Pste3g02835 3 21084679 21086111 ECH
Pste3g02835 3 21084679 21086111 Pste1g03211 1 14608268 14610638 PCT