Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02832 ATGACCTCCTTGACTCAGGCCTGGCTCCATAAGAACCTCTTCACCGGTCCCATTCCCGATTTGTCCCAATGCAAGTCCTTGTTTGACTTGCAGCTCCGGGACAACCAGTTTACCGGTCTGCTTCCCGCTTCCTTCATCACTCTTCCCAGTTTGAAGAATGTCTCCCTCGATAACAACCAACTTCAGGGTCCCCTTCCCGTTTTTGCCAAAGGTGTCAATGTTACTCTCGGTGGCTTCAATAGCTTTTGTCTCTCTACTCCTGGGACTTGCGATCCCAGGGTCATGGTTTTGCTTCACATTGCTGCCGCTTTCGCCTTTCCGATTCCGTTGGCCAATTCCTGGAAGGGTAATGACCCTTGTGATGGTTGGGGATATCTTGTCTGTGCTTCCAGCAACATTATTACTGTGAATCTTGCGAAACAAGGTTTTCAGGGTACCATCTCTCCCGCATTTGCCAATTTGACCGATCTGAGGAACTTGTTTCTCAATGGAAATAATTTGACCGGTTCTATTCCTCATACTTTGACCGCTCTGTCACAGCTTCAGATTCTTGATGTGTCTGATAACAACCTCTCCGGAGAGGTTCCCAAGTTCCCATCGACAGTGAAGTTAGTCACTGCGGGAAATGCTTTGCTTGGGAAAACTCCCAGTTCTGGAGAAGGAGAAAGTGGAACTGCTCCTTCACCTGGTGGAAGGGATGGTGATTCAGCTAAGCGTAATTCCTCGTTGTCCCCAGGTTGGATTGTTGGTATAGTTATTTTTGTTATGTTTTTTATTGCCGTGGTGTTGTTTGTGTCTTGGAAGTGTTATGTCAAAAAGCAGCAAGGGAAGTTCAAGACGGTTAATGGTACTGAAAATGGACAAGGAGGCTTTAAACTTGATGCTGTTACTGTTTCTAACGGAAATGGTGGTGTTGCCAGTGAATTGCAAAGCAAGAGCAGTGGTGATTACAGCGACCTTCACGCATTTGATGGTGGTGGAAATCCAACCATTTCAATCCAAGTTATTCGACAAGTGACAAATAATTTCAGTGAGGATAATATTTTAGGCAGGGGAGGGTTTGGAGTAGTTTATAAGGGGGAGTTGCATGACGGAACCAAAATTGCTGTCAAGAGGATGCAGTCTGTTGCGATGGGAAACAAAGGACTGAAAGAGTTCCAAGCAGAGATTGCAGTTCTTAGTAAAGTCAGGCATAGACATTTGGTTGCTCTTCTAGGCTATTGCATCAATGGCGATGAAAGGATTTTGGTGTATGAGTATATGCCTCAAGGTACATTAACACAGCATCTGTTTGAATGGCCTGAACATGGGTATGCTCCTTTGACTTGGAAACAGAGGGTAGCAATAGCTTTGGATGTAGCAAGGGGGGTGGAGTACTTGCACAGCTTAGCTCAACAAAGTTTCATTCATAGAGACTTAAAGCCCTCAAACATACTACTAAGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGTTTGGTAAAAAATGCACCAGATGGGAAGTATTCTGTTGAGACACGGTTGGCTGGAACATTTGGATATCTTGCACCTGAGTATGCAGCTACCGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTAGTTTTGATGGAACTTGTCACCGGTAGAAAGGCATTGGATGATACTGTGCCAGATGAAAGATCTCACTTGGTTACATGGTTCCGTAGGGTACTAATTAACAGGGAAAACATTCCAAAGGCAATTGATCAAATTCTGAATCCGGATGAGGAAACCATGGAGAGCATATATAAAGTAGCTGAATTGGCAGGTCATTGCACTGCGCGTGAACCATACCAGAGGCCAGATATGGGTCATGCTGTGAATGTCTTGGTTCCATTTGTGGAGCAATGGAAACCTACTAGCCATGAAGAAGAGGAAAGCTCTGACCTTCAGTTGAGCCTTCCTCAAGCTCTACGAAGGTGGCAAGCCGATGAAGGCACTTCCTCAATATTTAATGACATGTCCATCTCACAAACCCAGTCAAGCATTCCCTCTAAACCTGCAGTATTTCCAGACTCCTTTGATTCTATGGATTGCCGGTGATCAACCGAGACAATCCTATTAGTCCTTGAGGAGAAAATAATATACCCAAGAAAGCCATAGGTTGTAAAGCTGTCTTGACCTAGTAGCATCGGCGATTTCTTTGTAATTTATTTATTATTTTTAAAATGTCATTTTTTTTTTTGGGGTGTTCTTAAAATCTCCTCAACTGAACTAAACCTGGATCTGTGAGTTTGACGTTCTTTATCGATTCTTTTAAGCTGACGGATGGTCATGGTACGTGCTTGTGAGGATGATTATTTTTTTTAAGGGAAGGATTATGGATATATTTAATTTATTATATTCATTTTTTCGGTCCTTTTGGAATCAAAATTATACTTATCGCTT 2415 0.4315 MTSLTQAWLHKNLFTGPIPDLSQCKSLFDLQLRDNQFTGLLPASFITLPSLKNVSLDNNQLQGPLPVFAKGVNVTLGGFNSFCLSTPGTCDPRVMVLLHIAAAFAFPIPLANSWKGNDPCDGWGYLVCASSNIITVNLAKQGFQGTISPAFANLTDLRNLFLNGNNLTGSIPHTLTALSQLQILDVSDNNLSGEVPKFPSTVKLVTAGNALLGKTPSSGEGESGTAPSPGGRDGDSAKRNSSLSPGWIVGIVIFVMFFIAVVLFVSWKCYVKKQQGKFKTVNGTENGQGGFKLDAVTVSNGNGGVASELQSKSSGDYSDLHAFDGGGNPTISIQVIRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMQSVAMGNKGLKEFQAEIAVLSKVRHRHLVALLGYCINGDERILVYEYMPQGTLTQHLFEWPEHGYAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLSDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELVTGRKALDDTVPDERSHLVTWFRRVLINRENIPKAIDQILNPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPFVEQWKPTSHEEEESSDLQLSLPQALRRWQADEGTSSIFNDMSISQTQSSIPSKPAVFPDSFDSMDCR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02832 689 SMART serkin_6 343 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02832 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Pste3g02832 689 SUPERFAMILY L domain-like 3 214 - -
Pste3g02832 689 MobiDBLite consensus disorder prediction 213 239 - -
Pste3g02832 689 PANTHER OSJNBA0070M12.3 PROTEIN 1 689 - -
Pste3g02832 689 SUPERFAMILY Protein kinase-like (PK-like) 329 632 IPR011009 -
Pste3g02832 689 MobiDBLite consensus disorder prediction 666 689 - -
Pste3g02832 689 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Pste3g02832 689 CDD STKc_IRAK 349 619 - -
Pste3g02832 689 Gene3D Ribonuclease Inhibitor 92 215 IPR032675 -
Pste3g02832 689 Gene3D Transferase(Phosphotransferase) domain 1 421 645 - -
Pste3g02832 689 Gene3D Phosphorylase Kinase; domain 1 305 420 - -
Pste3g02832 689 Pfam Protein tyrosine and serine/threonine kinase 346 616 IPR001245 GO:0004672|GO:0006468
Pste3g02832 689 FunFam receptor protein kinase TMK1 304 420 - -
Pste3g02832 689 FunFam Leucine-rich repeat receptor-like kinase 92 215 - -
Pste3g02832 689 FunFam receptor protein kinase TMK1 421 638 - -
Pste3g02832 689 Gene3D Ribonuclease Inhibitor 1 83 IPR032675 -
Pste3g02832 689 ProSiteProfiles Protein kinase domain profile. 343 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02832 Pste-Chr3 21051114 21054238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02832 199 619 Receptor kinase-like Gene Family AT4G02010 38.443 5.50e-76 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste3g02832 PK_Tyr_Ser-Thr 2e-48 CL0016