Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02824 ATGTGTATTAATAATATAAGGGAAACAAGAGAGATGGTGAGAACCCCTTGCCGTGATACAAGTGGACTTAAGAAAGGAACTTGGACTCCCGAGGAGGATAGCAAGTTAATAGCTTATGTCACTCGCTATGGTTCTTGGAATTGGCGCCAACTCCCTAGATTTGCTGGACTGGCCAGGTGTGGAAAGAGTTGCAGACTTAGGTGGCTCAATTATCTCAGGCCCAACATCAAAAGAGGGAACTATACTCAAGAAGAAGATGACATTATAATCAGACAGCACCAAAATCTGGGTAGCAGATGGTCTGTCATTGCCACTCACTTACCAGGGAGAACAGATAACGAAATAAAGAACCACTGGCACACCAACCTAAAAAAATGTTGTGGAAAGAACTTAGTTCGCACCAATGAAAATTTTAAAGCCCCAAAACCAAAAACCTATGGGTCCAGGGATTCAATGCAGAACAATGGTTTGTGTCACAGTAGTAGTTTTTCAACAACTTCGAAAACCTCTGACTCTGGTCCTTTATCCCCGCAATTATCCTCAAGCGAAACCTCGGATTTTACCACCAACGAAAATTTGTTACTGGAATATGAGTTTGATTTTGTAGATGCATGCTTAGTGGACGCGGAACAGAATATTTCGACAGAGTCACATGTAGGCAACATTTACGACGCCTCAATGTCAGACAATGGTAATGGTTCAGATGCTACAAGGTGCATGGATGCTTGGCCATGGTCCAATTCTAACGAAAATTTGGTTGTGGAGAATGAAGATTTTGCGTTTCTAGAAGCAATACAACCAATAACTGCAAATTTTTGGACAGAGGCGTACACGGCTGACATGTCCCTTGTTCCAAACGAATTACTTGCCCCTTTTGTGAACCAATCCGAAGAATGCTTTTCTTCCACGTATGAAGCAGATCTTTGGTGCCAGACCAATTCATCTGATTTAAACGCCAACTTATAAATATATTGTCTTTTTTAAATTCCAATTTTCAACGGTATCTATATTACTCCTTCAAAGTTTCTACATAAACAAAAAAGGAAGTAATTCTCGTCACGGATACAGAAATTTGGGACATCGACTGACTGAGG 1094 0.4086 MCINNIRETREMVRTPCRDTSGLKKGTWTPEEDSKLIAYVTRYGSWNWRQLPRFAGLARCGKSCRLRWLNYLRPNIKRGNYTQEEDDIIIRQHQNLGSRWSVIATHLPGRTDNEIKNHWHTNLKKCCGKNLVRTNENFKAPKPKTYGSRDSMQNNGLCHSSSFSTTSKTSDSGPLSPQLSSSETSDFTTNENLLLEYEFDFVDACLVDAEQNISTESHVGNIYDASMSDNGNGSDATRCMDAWPWSNSNENLVVENEDFAFLEAIQPITANFWTEAYTADMSLVPNELLAPFVNQSEECFSSTYEADLWCQTNSSDLNANL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02824 321 MobiDBLite consensus disorder prediction 160 185 - -
Pste3g02824 321 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Pste3g02824 321 Pfam Myb-like DNA-binding domain 78 123 IPR001005 -
Pste3g02824 321 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Pste3g02824 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
Pste3g02824 321 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Pste3g02824 321 SMART sant 24 74 IPR001005 -
Pste3g02824 321 SMART sant 77 125 IPR001005 -
Pste3g02824 321 Gene3D - 80 152 - -
Pste3g02824 321 Gene3D - 18 78 - -
Pste3g02824 321 CDD SANT 80 123 IPR001005 -
Pste3g02824 321 CDD SANT 27 72 IPR001005 -
Pste3g02824 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Pste3g02824 321 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Pste3g02824 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 12 220 - -
Pste3g02824 321 FunFam MYB-related transcription factor 24 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02824 Pste-Chr3 20950998 20952564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02824 12 131 MYB Transcription Factor Family AT2G31180 65.000 5.14e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g02824 Myb_DNA-binding 1.7e-12 CL0123