Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02821 TTCTCAACACCACCAACTATAGCTAAGACCAGCTTCACCAAACAGTGAACACTTTTCACTTGTCCATGGATTTTGACCTCGAAAACCCTCTTGGCAACTTCCACGACCTTCCCTGCGACGCTGTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCACCCAATTACTGTCACAGTCTTAAAACCAGCGACTTCGACATCTCTGTTAGAGGAGATGTTGTCTCTTTCATCTCACAGTTCGCCTGCACCTTCCATCCAGTTCTCCCTTACTTAGCTATCAACTACTTGGATCGTTTCCTCGCTAATCAAGGAATACTCGAACCCAAGCCATGGGCAAACAAACTTCTTGCAATCTCTTGCTTTTCTCTAGCTGCCAAGATGTTGAAAACAGAGTACTCTGCCACTGATGTCCAGGTTCTTCTGAATCATGGTGACGGTGGTGCCATTTTTGAGACACAAACGGTACAGAGAATGGAAGGCCTTGTTTTGGGCGCTCTCCAATGGCGAATGCGTTCAATCACTCCTTTCTCTTTCATTCCCTTTTTCCTCAATTTATTCAGGCTAAAAGACCCGGCATTGACGCATGTTCTGAAAGATCGAGCGTCTGAAATTATACTCAACTCACAACGAGAGATAAAGCTCTTGGAATTCAGGCCCTCTATAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCGTTTCAATATCCGTGCTTCTTGAGAGCAATATCGGACTGTTCATATGTTAATAAAGAAACTATGGTGCAATGTTATAATGTGATACAAGACATTGCCAGGGAGGAGTACGAATCTGTGTTGAATATAAATTCAACTTCAGACACACCGGTTAATGTGTTAGACGAACATTTTCTGAGTTCGGAAAGTGAAAAAACCAGCGGAATTAACGTTGCTCCAACTGTGATGCAAGAACAGGACTATAAAAGAAGGAGATTAACCGCTTATGGCAACAAACACACGGTCCCGTTTTCACATTTTCATCAATGCTGAAGTACCACAACACTACATTGAATCCTCTGGTACATCCACGAGTGATTGATAAAAAAAAAATGTGGAGAAAACAATAATATAGAAAGAGAGATAATGATGCACTGAGAATGAGAAGAGAAGAATTCGATCAATTGTTAGCTGACAAAATCACTGTAACGTGATCCTCGTACGGCCTTCATTAAATCAGTTGGTTGTTGTGTAAAGAGCATTGGAGATAAGATGGGATTTTCTTTTGTTTTCTAAGAGAGCAAACAAAAAGACAAAACGTGACTTTTTTTTTTCTCTGTTTTGTTGTGTATGTGTGGTTCTGTTTCTTGGCTTCTGGCAAAGGAATAATCACAATAGTAATAGTGAAGCAACCAATTTTCTTGAAAAATAAAATATAGTACTCTC 1415 0.4113 MDFDLENPLGNFHDLPCDAVPSLFLIESDHIPPPNYCHSLKTSDFDISVRGDVVSFISQFACTFHPVLPYLAINYLDRFLANQGILEPKPWANKLLAISCFSLAAKMLKTEYSATDVQVLLNHGDGGAIFETQTVQRMEGLVLGALQWRMRSITPFSFIPFFLNLFRLKDPALTHVLKDRASEIILNSQREIKLLEFRPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETMVQCYNVIQDIAREEYESVLNINSTSDTPVNVLDEHFLSSESEKTSGINVAPTVMQEQDYKRRRLTAYGNKHTVPFSHFHQC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02821 318 CDD CYCLIN_AtCycD-like_rpt2 153 244 - -
Pste3g02821 318 SMART Cyclin_C_2 153 287 IPR004367 -
Pste3g02821 318 Pfam Cyclin, C-terminal domain 153 252 IPR004367 -
Pste3g02821 318 PANTHER CYCLINS 32 254 IPR039361 -
Pste3g02821 318 FunFam D6-type cyclin 33 148 - -
Pste3g02821 318 Gene3D - 33 151 - -
Pste3g02821 318 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
Pste3g02821 318 FunFam D6-type cyclin 149 242 - -
Pste3g02821 318 Gene3D - 23 242 - -
Pste3g02821 318 SUPERFAMILY Cyclin-like 13 150 IPR036915 -
Pste3g02821 318 SMART cyclin_7 55 144 IPR013763 -
Pste3g02821 318 SUPERFAMILY Cyclin-like 134 249 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02821 Pste-Chr3 20919831 20921994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02821 1 299 Core Cell Cycle Gene Families AT4G03270 44.409 9.58e-81 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02821 3 20919831 20921994 Pste3g02821 3 20919831 20921994 ECH
Pste3g02821 3 20919831 20921994 Pste1g03266 1 14909558 14911825 PCT