Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02817 TTTAGAAACATAAAACATTCGGTGTGATCGTGAGTTGTAACATCTAAGCACTTACCTCTTTGATACCAAGTCATGGACGAGTTCCCAAGTGGTGGAAACATGGAAATGGCTGAGGTGGAGAGTCCAATCCTTAAGGTTGGAGAGGAGAAGGAGATTGGAAAAAACGGGCTAAAGAAGAAGCTGCTCAAGGAAGGTGAAGGTTGGGACACCCCTGACAATGGAGACCAAGTTGAAGTGCATTACACCGGCACCTTGCTTGATGGAACCAAATTTGATTCTAGCCGTGATAGGGGCACCCCTTTTAACTTCAAACTTGGCCAAGGACAAGTCATCAAGGGGTGGGATGAAGGCATCAAATCCATGAAGAAAGGCGAGAATGCCCTTTTCACAATACCACCAGAATTGGCCTATGGAGAGTCTGGGTCTCCTCCCACTATTCCCCCCAATGCAACTCTGCAGTTTGATGTGGAGTTGTTGTCTTGGACGAGTGTGAAGGACATATGCAAGGATGGAGGTATTTTGAAGACCATAATTACTGAAGGGGAGAAATGGGATAATCCTAAGGACCTGGATGAAGTGCTTGTCAAGTATGAAGCTCGTCTTGAAGATGGAACAGTTGCTTCAAAATCTGATGGAGTGGAGTTCACTGTGAGAGAGGGGTATTTCTGTCCTGCTTTGGCTAAGGCAGTGAAAACAATGAAAAAGGGAGAGAAAGTCCTATTAAATGTGAAGCCACAATATGCATTTGGTGAGAGTGGAAGACCGGCATCAAGAGGTGAAGCTGCCGTACCTCCAAATGCTTCACTTCAAGTGGATCTTGAGTTGGTCTCGTGGAAGAATGTGTCTGACATTACCAATGACGGGAAGGTTCTCAAGAAGACTTTGAAGGAAGGAGAGGGATATGAACGACCAAATGATGGAGCTGTAGTTCAAGTGAAATTGATGGGTAAGCTTCAAGATGGAACCGTCTTCATTAAGAAGGGCTATGATGACGAACAGCCATTTGAGTTCAAAATTGATGAAGAGCAAGTAATTGATGGACTTGACAAAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCACTTCTGATCATACAACCTGAATATGCTTTTGGTTCATCAGAATCCCCTCAGGAAATGACTAATGTACCGCCCAATTCCACAGTATACTATGAAGTTGAGCTGCTTTCCTTTGTAAAGGAAAAGGAATCATGGGATCTGAATACACAAGAGAAAATTGAAGCTGCAGGGAAGAAAAAAGAAGAAGGAAATGCTTTATTTAAGGCTGGTAAATATGAAAGAGCATCAAAGAGATATGAAAAGGCCATTAAATATATTGAGTATGATTCCTCATTCAGTGATGAGGAGAAACAGCAGACTAAGGCATTGAAAATTACATGTAATCTCAACAATGCAGCGTGTAAGTTGAAGCTAAAGGACTACAAACAGGCAGAGAAGACGTGCACAAAGGTGTTAGAGCTTGATAATAGAAATGTAAAAGCACTGTATCGGAGGGCACAAGCATATCTTCATCTTGTAGATTTGGATCTAGCTGAAATGGATATTAAGAAAGCTCTTGAGATTGAGCCAGACAACAGGGATGTAAAGATGGAGTACAAAATTTTGAAGCAGAAAGTGAGAGAATACAACAAGAAGGACGCGCAGTTTTACGGCAGCATATTTGCAAAAATGAATAAACTAGAACAAACAAGAACAGCAACAGAAAAGCAAGAGCCTGTGCCAATGACCATTGATAGTAAAGCTTAAACTTCAAAATTTGTGGTCTGTGGACGTTTTCTACTACGATTTTCCAGTTGTGTCGTCTCATTTTCGGGTTCCTTAA 1843 0.4183 MDEFPSGGNMEMAEVESPILKVGEEKEIGKNGLKKKLLKEGEGWDTPDNGDQVEVHYTGTLLDGTKFDSSRDRGTPFNFKLGQGQVIKGWDEGIKSMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGILKTIITEGEKWDNPKDLDEVLVKYEARLEDGTVASKSDGVEFTVREGYFCPALAKAVKTMKKGEKVLLNVKPQYAFGESGRPASRGEAAVPPNASLQVDLELVSWKNVSDITNDGKVLKKTLKEGEGYERPNDGAVVQVKLMGKLQDGTVFIKKGYDDEQPFEFKIDEEQVIDGLDKAVKNMKKGEIALLIIQPEYAFGSSESPQEMTNVPPNSTVYYEVELLSFVKEKESWDLNTQEKIEAAGKKKEEGNALFKAGKYERASKRYEKAIKYIEYDSSFSDEEKQQTKALKITCNLNNAACKLKLKDYKQAEKTCTKVLELDNRNVKALYRRAQAYLHLVDLDLAEMDIKKALEIEPDNRDVKMEYKILKQKVREYNKKDAQFYGSIFAKMNKLEQTRTATEKQEPVPMTIDSKA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02817 564 Pfam Tetratricopeptide repeat 476 508 IPR019734 GO:0005515
Pste3g02817 564 Pfam Tetratricopeptide repeat 452 473 IPR019734 GO:0005515
Pste3g02817 564 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 135 IPR001179 GO:0003755
Pste3g02817 564 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 163 252 IPR001179 GO:0003755
Pste3g02817 564 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 277 372 IPR001179 GO:0003755
Pste3g02817 564 Gene3D - 256 377 IPR046357 GO:0003755
Pste3g02817 564 FunFam Peptidylprolyl isomerase 256 377 - -
Pste3g02817 564 SUPERFAMILY FKBP-like 24 149 - -
Pste3g02817 564 SUPERFAMILY TPR-like 381 540 IPR011990 GO:0005515
Pste3g02817 564 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 255 IPR001179 GO:0003755
Pste3g02817 564 Gene3D Tetratricopeptide repeat domain 378 535 IPR011990 GO:0005515
Pste3g02817 564 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Pste3g02817 564 SUPERFAMILY FKBP-like 257 392 - -
Pste3g02817 564 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 283 375 IPR001179 GO:0003755
Pste3g02817 564 FunFam Peptidylprolyl isomerase 23 141 - -
Pste3g02817 564 Gene3D - 142 255 IPR046357 GO:0003755
Pste3g02817 564 ProSiteProfiles TPR repeat profile. 475 508 IPR019734 GO:0005515
Pste3g02817 564 FunFam Peptidylprolyl isomerase 380 535 - -
Pste3g02817 564 Gene3D - 22 141 IPR046357 GO:0003755
Pste3g02817 564 Coils Coil 508 528 - -
Pste3g02817 564 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 146 257 - -
Pste3g02817 564 SMART tpr_5 392 425 IPR019734 GO:0005515
Pste3g02817 564 SMART tpr_5 441 474 IPR019734 GO:0005515
Pste3g02817 564 SMART tpr_5 475 508 IPR019734 GO:0005515
Pste3g02817 564 FunFam Peptidylprolyl isomerase 142 255 - -
Pste3g02817 564 SUPERFAMILY FKBP-like 142 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02817 Pste-Chr3 20888385 20891614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02817 17 564 Calmodulin-binding Proteins AT5G48570 75.499 0.0 858