Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02782 GTTTGATATAATATGTAATTATTTGTCTTGCTCTTGGTCGTGGTCTCCAAGCTGTTTAATAAAACCACATTGGGTTAACATCAACCTTAATCACGACCTCAAATAAATTCTAAGCTTCAACTAACGCTAACTGTGTGTTTGTGCTTTCCACTTTTGCTACTTCTTTTCTCCGATCGAACCAACTCACGCGTGCATCGCAGCAAATCCGGTAGCCTCTCTCCGGTTTCAAAAATGCTTTCTGTACGGTTCTGCTGATTCTAGCTTTCTTTTCCTTGGATTCAACACCATGACACCTGGTTACGAATATGATATTAATGATCTGCATCAAGAGGCTCAAGCCAGATGGTTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAGAAGTTCCAGTTCACTCAAGAGCCCCCGCAACAGCCAACCAGTGGATCCCTTTTTCTTTTTAACAAAAGAGTCCTGCGTTTCTTCCGCAAAGATGGTCATAACTGGCGCAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACATGAGCGGCTGAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTATGCACATGGGGAGCAGAGCCCTAATTTCCAGAGGCGGAGCTATTGGATGTTGGATCAGGCATATGAGCATATTGTTCTTGTACATTATAGAGACACAGGCGAGGGAAAGCTCAGTTCTGGAGCTGGCGCACAATTGTCACCAAGCTCTTCTGCATTTAGTCAGAGTTCTAGCCCATATTCTACTCAGAATCCAGGCTCAACATCCATACATGCTGATTCATATGAACCTAATCAGAGCTTCTCCAGTCCTGGATCTGCGGAAATTACCTCTGATATATTCATTCCAAGCAATACAATGGGTCACATGGATGGAACAGATGCAGAATCAGGAACCTCTTCTGAACTAGAGGTTACTCAAGCTTTACGCCGATTGGAGGTTCAGCTAAGTTTGAATGAGGACAACTTTGAAGATATTGCTCCCTTTGGCAATAATCATGAGCATAATCAAAGGGTGATCAGCAATCAAGAGCAATCTGCAGCTTTCTCTGGACCAGATGATCAAAGGCTATTTTATGATGGATATAATGGAAGGCAAGGTGATGGTGGTGAATATTATCATGAATTAATAGACCATGGATACACTGATGCCAATGAAAAGGCTTTATGGACAGGGGTGCTGGAATCATGTGAGTCCTCATCTGCAGTCAAATTACCACAGAAAAATTATTACTTGCAAGCTGGAAATGAAAACTCTCTATCTTCTTCAAGAACGGTACCAATGTCCAACCAGGAAAACAGTCACTGGCTAAACTTAAACAGTAATAATGCCGTAAACTCAGCTGTTTTCTCACCACCTCAAAGAGTTGATGAAGTCAAATTTCCTACTTATTCTTCTATGGTGGAAACACAAGTAATTAATTCTGGCTACTATGAATCATTGTTTGACCAAAGCCAAATTGGAGCTCCTCCAGATGCAGATTCAAGCTTGACTGTTGCACAAGACCAGAAATTTACTATTAAGATAGTCTCCCCAGAATGGGGTTATGCCACTGAGATTACCAAGGTCATCATTGTTGGCTCTTTCCTCTGTCATCCCTCAGATTCTGTCTGGACTTGTATGTTTGGTGATGTTGAGGTTCCTGTTGAGATAATTCAAGATGGTGTAATTTGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTTACTTTGTGCATTACTTCTGGAAACCGGGAGTCCTGCAGTGAAGTCAGAGAGTTTGAATATCGTGATAAGACCAATAGTAGCACCCAAGTTACTAGATCAGAAACAGAAGCCACTAGAAGTCCAGAAGAGCTATTATTACTTGTTAGATTAGGGCAGATGCTTCTTTCTGAATCAGCAATAAAGAATGACAACATAGAATCTGGAACTCCTCTCGTAAAACAGAAAGCTGATGATGATTCATGGAGCCATATTATAGAAGCTCTTCTAGTTGGAAGTGGAACGTCAACCGGTACGATTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTTGAACAGTGGCTTTCTTGCAGATCTCAAGAAAGAGATGAAGAGACGGGCTGCTCTTTGTCCAAAAAAGAGCAAGGGATTATTCACATGGTTGCTGGGTTGGGCTTCGAGTGGGCCTTGAACCCTATTCTCAGTTGTGGAGTGAATATAAATTTCCGTGACATCAATGGGTGGACTGCCCTTCATTGGGCCGCACGTTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGAGCATCTGCTGGAGCTGTGACAGATCCAAATGCACAAGATCCAATCGGCAAAACTGCTGCATCTATCGCATCAAGCAGTGGACACAAGGGACTGGCAGGGTATCTTTCAGAGGTAGCTGTAACAAGCCATTTGTCATCGCTTACCCTGGAAGAGAGTGAATTATCTAAAAGTTCTGCTGAACTTCAGGCAGATATGACCGTTAGCAGTGTCTCCAAGGAAAATCTTGTTGCCACTGAGGATCAGGGGTCACTCAAAGATACCTTGGCTGCTATAAGAAATATAACACAGGCAGCTGCACGGATACAATCTGCTTTTCGCTCACATTCTTTTAGAAAACGGAGAGCAAGAGAAGCAGCTACTAGTGCAGATGGCATTGGTAGCATTTCAGATATTTCTGCTATGTCAAAACTTGCCTTTCGGAACTCACGCGAATATAATTTAGCTGCTTTATCGATCCAGAAGAAATATCGAGGTTGGAAAGGCCGCAAAGATTTCTTAGCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGCTACCAGGTTAGGAAGCATTACAAGGTAATTTGGGCAGTTGGAATCTTAGACAAGGTTGTGCTGCGATGGAGGAGAAAAGGAGCTGGTTTACGAGGTTTCCGACAAGAGATGGACATTAATGAAAATGAAGATGAAGATATTCTCAAAGTGTTCAGGAAACAGAAAGTCGATGTAGAAATTGAAGAGGCTGTTTCACGAGTGTTGTCCATGGTGGATTCACCAGATGCTCGTGAGCAATATCATCGCATGTTGGAGAAATATCGTCAAGCTAAGGCTGAACTTGCGGGTACGAGTGACCAAGTATCACTATCAACTTCTGTAGGAGATGCCTTGTTTATGGAAGATGATGTTTTTCCATTTCCATAGGAGCCTTGCTAATCTGAATTCTTTTGAATGATCAATTTCTGGAATAATCATTTCGATAGTCTTTGTATCTAGATGCGTACAACAAACTCACTGACTGTTTGGGACAGTCTAGATTGTATAGCGATAATGGCAATGAACATTGATACTTTGTAAAATATAATATAAAATGGTGTTGAAGGCAGGTAGGCTGATTTTTCAAATTCAATGGATTTCCATCGCATTTCCTTGCCTGAACTTTTAATATCTTTGCAAAATAAAGATACCATCTTTTACAACCGAACAAAGTATCTGAAAATGTAGCATTAT 3505 0.4165 MTPGYEYDINDLHQEAQARWLKPAEVMYILQNHEKFQFTQEPPQQPTSGSLFLFNKRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQSPNFQRRSYWMLDQAYEHIVLVHYRDTGEGKLSSGAGAQLSPSSSAFSQSSSPYSTQNPGSTSIHADSYEPNQSFSSPGSAEITSDIFIPSNTMGHMDGTDAESGTSSELEVTQALRRLEVQLSLNEDNFEDIAPFGNNHEHNQRVISNQEQSAAFSGPDDQRLFYDGYNGRQGDGGEYYHELIDHGYTDANEKALWTGVLESCESSSAVKLPQKNYYLQAGNENSLSSSRTVPMSNQENSHWLNLNSNNAVNSAVFSPPQRVDEVKFPTYSSMVETQVINSGYYESLFDQSQIGAPPDADSSLTVAQDQKFTIKIVSPEWGYATEITKVIIVGSFLCHPSDSVWTCMFGDVEVPVEIIQDGVICCEAPSHLPGKVTLCITSGNRESCSEVREFEYRDKTNSSTQVTRSETEATRSPEELLLLVRLGQMLLSESAIKNDNIESGTPLVKQKADDDSWSHIIEALLVGSGTSTGTIDWLLEELLKDKLEQWLSCRSQERDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPNAQDPIGKTAASIASSSGHKGLAGYLSEVAVTSHLSSLTLEESELSKSSAELQADMTVSSVSKENLVATEDQGSLKDTLAAIRNITQAAARIQSAFRSHSFRKRRAREAATSADGIGSISDISAMSKLAFRNSREYNLAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKHYKVIWAVGILDKVVLRWRRKGAGLRGFRQEMDINENEDEDILKVFRKQKVDVEIEEAVSRVLSMVDSPDAREQYHRMLEKYRQAKAELAGTSDQVSLSTSVGDALFMEDDVFPFP 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02782 970 CDD IPT 415 500 - -
Pste3g02782 970 Gene3D Immunoglobulins 409 504 IPR013783 -
Pste3g02782 970 ProSiteProfiles Ankyrin repeat profile. 644 676 IPR002110 GO:0005515
Pste3g02782 970 ProSiteProfiles Ankyrin repeat region circular profile. 644 670 - -
Pste3g02782 970 SUPERFAMILY E set domains 416 499 IPR014756 -
Pste3g02782 970 FunFam Calmodulin-binding transcription activator 2 812 860 - -
Pste3g02782 970 ProSiteProfiles IQ motif profile. 762 791 IPR000048 GO:0005515
Pste3g02782 970 SMART CG_1_2 12 130 IPR005559 GO:0003677
Pste3g02782 970 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Pste3g02782 970 ProSiteProfiles IQ motif profile. 813 842 IPR000048 GO:0005515
Pste3g02782 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 802 859 IPR027417 -
Pste3g02782 970 MobiDBLite consensus disorder prediction 133 213 - -
Pste3g02782 970 FunFam Calmodulin-binding transcription activator 4 isoform A 525 709 - -
Pste3g02782 970 Gene3D - 813 861 - -
Pste3g02782 970 SMART ANK_2a 644 673 IPR002110 GO:0005515
Pste3g02782 970 ProSiteProfiles IQ motif profile. 836 861 IPR000048 GO:0005515
Pste3g02782 970 Pfam IPT/TIG domain 416 498 IPR002909 -
Pste3g02782 970 Pfam Ankyrin repeats (3 copies) 626 704 IPR002110 GO:0005515
Pste3g02782 970 Gene3D - 519 709 IPR036770 -
Pste3g02782 970 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 942 - -
Pste3g02782 970 SMART iq_5 761 783 IPR000048 GO:0005515
Pste3g02782 970 SMART iq_5 812 834 IPR000048 GO:0005515
Pste3g02782 970 SMART iq_5 835 857 IPR000048 GO:0005515
Pste3g02782 970 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Pste3g02782 970 MobiDBLite consensus disorder prediction 136 213 - -
Pste3g02782 970 Pfam IQ calmodulin-binding motif 816 833 IPR000048 GO:0005515
Pste3g02782 970 Pfam IQ calmodulin-binding motif 838 857 IPR000048 GO:0005515
Pste3g02782 970 SUPERFAMILY Ankyrin repeat 612 706 IPR036770 -
Pste3g02782 970 FunFam Calmodulin-binding transcription activator 2 409 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02782 Pste-Chr3 20595704 20603955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02782 5 970 CAMTA Transcription Factor Family AT1G67310 52.000 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pste3g02782 CG-1 3e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02782 3 20595704 20603955 Pste3g02782 3 20595704 20603955 ECH
Pste7g02412 7 22869451 22871034 Pste3g02782 3 20595704 20603955 PCT