Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02777 AGATAATGCCCTATAATATTGAAAACATTTGTGCTATGCTACCGTATTCTTATCATCTTGCCTTCCCAAATTCTCCTATCTCAGCTCCATCAACTCTTTCTTTTAAGCCCTTGTCAGCTTCATTCTCCATGTTTAGTAGTTATCTTTTTATTTTTACAAGAAATAAAAATCCCCGGAACACACTCACGTGCTTGTGTTGTTCTTGTTTGGTTCTAGGGCCATGAAGTGCATGCTAGAGCTTCTTTGCTGAGTGATAGTAAAAATCGAATCTTTTGTAGGTTTAGTTTTGGCCCTTCCTTTTGGTTCTGCGTCTTGGTTGGTAGCTGCTGCTAGCTGACAAGATAATAAGGAGTATCAATTTCTGTTTAGAATTAGAAACCCAGAATCTTGTGATTCTTTTATTCTTTAAAAGGGTATTTGAATTTTCTTATCTGCCTCAAATTTCAGTGTTCATTTTGCATTTCTGAATTTTAAGCTATTGGGGTGGATAAGACAGCATCTTATCAAGGTCACGTCTCTTATTATTATTTTTATTATTATGTCTTTTTTTTTTTTCTTCCCTTCAACCTAGTTGTTTTTAGGAATTGGGTTTGTGTTGTTGTTCTTCAAAATCCTTCAATCACTAGCCTAAAAGCTTTTTAGTGTGTGTTAGCCTTGTGGGGATTCTGTGGATTTGACAGCGGTTCTCCCCTCTCTCTCACAAACACAAGCCTACCTGGAATCCGCTAGAGTTGACACCCACAACCTCTTGGAACTGTTTCTTTTTAACTTGTGTTGGTTACTGTTGTGGATGAGTTTGCTCCATATAGTTGGGTTTGGTCTAAAAGTGGGGCATCTACTTTTGGTGCTATGTTGCTGGGTTGTGTCTGTCGTTTACCTTAACTGGTTTATTAGCAGTGGAATTATAGACACCAAGATGGGTTTTCCTGGTGGTGGTGGTGGCAAGATGTGGCACAGATGGTGGGAGAAGATCTCAGGCCAGGGTTTCAAAATTCACCAACAGTACTACCAGTATATTGGGTCCAAGAAAGTGAAGAGAGCGTTGTGGAGGAAGCTTTTGCTGACATGGGTCGTGGGTTGGACCGTAGTATCTTTGTGGATCTTCTGCTACATGAGCTTGCAAGGTACTGAGAAGAGGAAAGAAACTCTGGCAAGCATGTGTGATGAAAGGGCTAGGATGCTGCAGGATCAATTTAATGTCAGTATGAACCATATCCAAGCCATGTCCATTCTGATCTCCACCTTCCACCACGCCAAAAACCCCTCAGCGATCGATCAGAAAACTTTTGCCAGGTACACAGAAAGAACAGCTTTTGAGAGGCCTCTCACGAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCTGAAAGGGAACAATTTGAAAAGCAACAAGATTGGACTATCAAGAGGATGGATACTCTAGAGCAGAACCCTGTTCATAAGGATGATTATGCCCCAGAGGCATTGGAGCCCTCCCCCATTCAGGAAGAATATGCTCCTGTCATCTTTGCACAGGATACAATTGCACATGTGATTTCTGTTAATGTGCTTTCTGGAAAGGAAGACCGTGAAAATGTTCTGCGTGCTAGAGAATCAGGCAAAGGCGTTTTGACTGCGCCCTTCAGGCTGCTCAAAACAAATCGTCTAGGGGTTATCCTGACATTTGCTGTCTACAAGAGAGATCTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCAACTGATGGGTATCTTGGGGGAGTCTTTGATGTTGAGTCATTAGTAGAGAAATTACTTCAGCAACTTGCTAGCAAGCAAACTGTTATTGTTAATGTGTATGATACTACAAATCATACTCATCCAATTGCCATGTATGGCTCAAATGAATCAGGGGATGTGTTCTATCATGTCAGCACTCTTAACTTTGGAGACCCTTTTAGGAAGCATGAGATGCACTGCAGGTTCAAGCAGAAACCACCATGGCCATGGTTGGCAATAACTACTTCAATTGGTATCCTTGTTATTGCACTCCTTGTTGGACATATTTTCCATGCCACAGTGAATCGAATTGCCAAAGTGGAAGATGATTACCGTGAGATGATGGAACTTAAAAAAAGAGCTGAGGCAGCTGATATTGCAAAATCCCAGTTTCTTGCTACTGTTTCCCATGAGATCAGAACACCAATGAATGGTGTTTTAGGGATGTTGCATATGCTTATGGACACAGATCTAGATGTAACGCAACAGGAATATGTCAGGACAGCACAGGAAAGTGGAAAAGCTCTGGTGTCACTTATAAACGAGGTTTTGGATCAGGCTAAGATTGAGTTTGGTAAGCTAGAGCTTGAGGCTGTTCTCTTTGACATTCGAGCAATTTTGGATGATGTATTGTCTTTATTTTCTGAGAAGTCTCAAGGAAAAGGAGTAGAGTTGGCAGTTTATGTATCAGATCAGGTTCCAGAGTTACTAATAGGTGATCCAGGAAGATTTCGACAAATAATTACCAATCTCATGGGTAACTCAATTAAGTTCACTGACAAAGGACATATATTTGTCACTATCCATCTTGTTGAGGAGGTTGTCCATTCAATTGAGGTCGACAAAGAATCCAACTCAGAAAATACCTTGAGTGGTTCTCCTGTAGCTGATAGTCGCCGGAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAAGGACCTCTTGGTTCTTTCTCATCCCCTTCCAGTGATCTTGTCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGCATTCCTCTTGAGGCCCAGCCCCTCATCTTCACCCCATTCATGCAGGTAGGTCCATCCATCTCCCGAAAGCATGGGGGAACAGGTATTGGCCTAAGCATCAGCAAGTGTTTGGTTGGCCTCATGAATGGTGAAATTGGATTCGTCAGCATACCTAAGATTGGATCTACATTCACTTTTACTGCTGTGTTCACCAATGGACACCCCAGTTCAAATGAATGCAAAATTCAACAAATCAACAGCCAACCTCAGTCTTTATCCTCAGAATTTGAGAGGATGAATGCGTTAATTATTGACCCAAGATCTGTTAGAGCAAAAGTGTCTAGATATCACATTCAACGGCTAGGCGTTCATGTTGAGATGGTTTCAGATTTAAACCAAGGTTTGTCAATCATAAGCAATGGGAATATAGTTATTAATATGGTCCTTATCGAGCAGGAGGTTTGGGATAGAGATTTAGGTCTGTCATTTCACTTTGTCAATAACACAAGGAAAATTGATTGTGGGGTTCCTCCAAAGCTGTTCATTCTTGTTAATTCTAGTAGTTCTTTTAAAGCTAGTATAAACTTGGGTGTTTATAATCCAACTGTCATCACCAAACCTCTGAGAGCAAGTATGCTTGCTGCCTCACTACAACGATCCATGGGTGTCCAGGGAGCTCCTCGAAATAGAGAGCAACAAAGTTTATCTCTTCGCCATCTTCTTCGTGGCAGGAAAATTCTAATTGTAGATGACAATAGTGTGAACCGTACAGTAGCAGCTGGTGCATTGAAAAAGTATGGAGCTGATGTAGTTTGTGTTAGCAGTGGAAAAGATGCCATCTCTTCCCTGAAGCCACCCCATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCTGAAATGGATGGATTTGAAGCTACAAGACGAATTAGGGATATGGAAGCGAGTTTGAACAACAGAGAAGTATCTGTAGATGACTTTGAAAATATCAGAATATGGCATGTGCCCATTTTAGCCATGACTGCAGATGTGATACAGGCTACACATGAGCAATGCTCAAAGTTTGGCATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAGCTCTACAGAGAAGTTTCACGGTTTTTCCAGTCATCTTGAAAAGAAAGATACATTACCGATCTAAACCAGAGGATTATTGATAATGGAAGCATAGCTGTCTGCACCCCTGGACTATCTGAAGTGGGTAAATAGGTTCAGAAGTCTCCTGAGAGTAAGTTTCCTATATAACAGCCAGTGCATGTTTTAGTATTTCACCACCTTAATGTTTGGTGATTGTTCACTAGAGACTGAAGAATGTTATCAATCTCATCTGAAAGAAAAAGAAAATGAAACGGGGAAAATATTGTAGAAGTTCAGAAATCGTTCATTCTACCTTTTTGACCTATTTTGTTGTCTTTTCTGCTGTGTTTAGGGTCCCCGGTTTAAAACATTGTTTTAGTGGCAGGGAGTGTACATAGGAACCAAGTTTGATTGGTTGCAATTGAGTTGTAATTGGTTGTTAAGGGTACCAAAACCCATTAATTCTTCCATGTAAAGTCAGTCTCTCTTCTCATCCGAAATGATAAGAGGCTGATTAGAAGACTAGGGTGTATTATAATACAGGTTCTGGAGTCCCATCCTTGTGTATGTAATAATACAACTTATAGTAATCTAGCTTAGGCACGTTACGTTGTATGTGTATTGATGCATGCTTGATTCAGGTGAAAGGAAGAAAATTAGCTTCTTGGCATCAAGGGGAGAAAGAGCACCATCAATCTTTGTATATGACTCACAATAAAGATGGTGATTGATGTATCCGCCGCAGCTTGCTTCCTTTTGTTCTTAACAGTGCTGGAATTCGACTTGCAAACATGTAACTGATACATTATACTCTAGTGTGAGTGATCCAACCATTTTTTGGCCGATATGTACATTTCCAATTCTGGATTTCCCTTGACTCATTGCTTTTGCCTTGACACTTCATGAAATCTTTTCATTTATTTTCGATTTCTATCGTAAATTTTAAAAGCCTAAGTTGCCAAATTTTTATGTCAAGAGTTACCTAGGAGGATTTTTATGCCCTTCATATTTAATGATTGAGGTTAATTAATGCAAACTACAAATTTGTTGGATTTTAGTCACATACATTTATCCTCTTTTTCGGTCATTCACAGAG 4934 0.4031 MSLLHIVGFGLKVGHLLLVLCCWVVSVVYLNWFISSGIIDTKMGFPGGGGGKMWHRWWEKISGQGFKIHQQYYQYIGSKKVKRALWRKLLLTWVVGWTVVSLWIFCYMSLQGTEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKNPSAIDQKTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQDWTIKRMDTLEQNPVHKDDYAPEALEPSPIQEEYAPVIFAQDTIAHVISVNVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDTTNHTHPIAMYGSNESGDVFYHVSTLNFGDPFRKHEMHCRFKQKPPWPWLAITTSIGILVIALLVGHIFHATVNRIAKVEDDYREMMELKKRAEAADIAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQESGKALVSLINEVLDQAKIEFGKLELEAVLFDIRAILDDVLSLFSEKSQGKGVELAVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVVHSIEVDKESNSENTLSGSPVADSRRSWEGFKAFSQEGPLGSFSSPSSDLVNLIVSVEDTGEGIPLEAQPLIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSIPKIGSTFTFTAVFTNGHPSSNECKIQQINSQPQSLSSEFERMNALIIDPRSVRAKVSRYHIQRLGVHVEMVSDLNQGLSIISNGNIVINMVLIEQEVWDRDLGLSFHFVNNTRKIDCGVPPKLFILVNSSSSFKASINLGVYNPTVITKPLRASMLAASLQRSMGVQGAPRNREQQSLSLRHLLRGRKILIVDDNSVNRTVAAGALKKYGADVVCVSSGKDAISSLKPPHQFDACFMDIQMPEMDGFEATRRIRDMEASLNNREVSVDDFENIRIWHVPILAMTADVIQATHEQCSKFGMDGYVSKPFEAEQLYREVSRFFQSS 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02777 1028 SUPERFAMILY CheY-like 888 1025 IPR011006 -
Pste3g02777 1028 CDD HisKA 444 505 IPR003661 GO:0000155|GO:0007165
Pste3g02777 1028 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 498 714 IPR036890 -
Pste3g02777 1028 SUPERFAMILY CheY-like 740 892 IPR011006 -
Pste3g02777 1028 PRINTS Bacterial sensor protein C-terminal signature 679 697 IPR004358 GO:0016310|GO:0016772
Pste3g02777 1028 PRINTS Bacterial sensor protein C-terminal signature 662 672 IPR004358 GO:0016310|GO:0016772
Pste3g02777 1028 PRINTS Bacterial sensor protein C-terminal signature 644 658 IPR004358 GO:0016310|GO:0016772
Pste3g02777 1028 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 556 717 IPR003594 -
Pste3g02777 1028 Gene3D - 508 719 IPR036890 -
Pste3g02777 1028 FunFam Histidine kinase 4 161 390 - -
Pste3g02777 1028 Coils Coil 421 441 - -
Pste3g02777 1028 SMART REC_2 891 1021 IPR001789 GO:0000160
Pste3g02777 1028 Gene3D - 108 160 - -
Pste3g02777 1028 CDD PRTases_typeI 847 920 IPR000836 -
Pste3g02777 1028 FunFam Histidine kinase 4 416 507 - -
Pste3g02777 1028 PANTHER TWO-COMPONENT HISTIDINE KINASE 91 1018 - -
Pste3g02777 1028 CDD REC_hyHK_CKI1_RcsC-like 893 1021 - -
Pste3g02777 1028 ProSiteProfiles Histidine kinase domain profile. 451 719 IPR005467 -
Pste3g02777 1028 SMART HKATPase_4 556 719 IPR003594 -
Pste3g02777 1028 SMART HisKA_10 444 509 IPR003661 GO:0000155|GO:0007165
Pste3g02777 1028 ProSiteProfiles CHASE domain profile. 157 383 IPR006189 -
Pste3g02777 1028 SMART CHASE_2 157 358 IPR006189 -
Pste3g02777 1028 Gene3D - 412 507 - -
Pste3g02777 1028 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 429 510 IPR036097 GO:0000155|GO:0007165
Pste3g02777 1028 Pfam His Kinase A (phospho-acceptor) domain 444 507 IPR003661 GO:0000155|GO:0007165
Pste3g02777 1028 ProSiteProfiles Response regulatory domain profile. 892 1025 IPR001789 GO:0000160
Pste3g02777 1028 Gene3D CHASE domain 161 390 IPR042240 -
Pste3g02777 1028 Pfam CHASE domain 160 356 IPR006189 -
Pste3g02777 1028 Pfam Response regulator receiver domain 893 1020 IPR001789 GO:0000160
Pste3g02777 1028 CDD HATPase_EvgS-ArcB-TorS-like 561 717 - -
Pste3g02777 1028 Gene3D - 886 1028 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02777 Pste-Chr3 20554939 20563164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02777 1 1027 Miscellaneous Gene Families AT1G27320 68.702 0.0 1416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste3g02777 CHASE 2.1e-36 CL0165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02777 3 20554939 20563164 Pste3g02777 3 20554939 20563164 ECH