Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02730 ATCCGGACTCATTAACTACCCTTATTCTCTTCCTGTTGTCAACTATAATGTCTCCTCCTACTTTGTTTTTCCTCCTTTCAGCTCTTCAAGTTCTAAGTTTAGTGCCAGCAACTGAATTTGTCTATAACAGAAACTTCAACTCCTCTAACGTAAAACTCTATGAGAATGCCACCATCGAAAACTCGGTTCTTAGACTCACGAACAAAACTTTCTTCTCCATTGGCCGTGCTTTTTACCCTCACAAAATACCCATGAAATCACCCAACTCTTCTTCCACGGTTCTGCCCTTTTCAACCTCTTTCATCTTTTCTGTCGCTCCTGTTGAGAACTTCCCTGTTGCTCATGGTTTTGCCTTTCTTTTCTCGCCTGTGATGGCTGTAAATGGAGCACTCTCCGGAAACTACTTGGGCCTGTTTAACCGCTCCACTTCAGGTAACTCTTCAAACCATGTTTTTGCGGTTGAGTTCGATGATTTTAGGAATGAGGAGTTCAATGAGGAGAATGATAATCATGTGGGTGTGGACTTGAATTCCATGATTTCGCTGTATTCGGAGCCTGCTGGGTTCTGGGGTGGGAAAGATGCTGAGGAATGGGAGGATTTGAAACTGGCTGGTGGCAGAAACTATCAGGTTTGGATTGAGTTTGAGAACTTTGAGATTAATGTTACTATGGCACCAGCGGGGAAAAAGAAGCCTCATAGGCCTTTGATTAGTAAGCCTATTAACCTTTCTTGGGTCTTGTTGGATGAAATGTATGTGGGGTTTTCTGGAGCTACAGGGAGAATGGTGGACATTTGTAGAATCTTGGCTTGGAGTTTTAGCAATTCTAATTTTTCAATTGGTGATGCTTTGAGTACCAAGCATTTGCCTTTGTATGTGCATCCAAAGACATCGCTTTTTAGATCAAATGGTTTCATAATAGGCATAACTTTTGGTGCATTTTTTGTGGGTGGATTCTGTGCTTTGGTGGTTTTTTTCAGTTTGTTCAGAACCAGAAGGGGAGAAAAACAGGAAAATTTGGAAGACTGGGAGTTGGAGTATTGGCCGCATAGGATTAGCTATCAGGAGATTTGCGATGCAACATGTGGATTCTCTGAAGAGAAAGTGATCGGCATTGGAACAAGTGGGAAGGTATACAAGGGAGTTTTGAAGGGAGTAGAAGTTGCAGTGAAGAGCATCAATCATGAGACTCGACATGGAATGAAAGAGTTTCTGGCAGAGATTTCAAGCCTAGGCAGAATGAAACACAGAAATTTAGTGGGTTTCAGAGGTTGGAGTAAAAGAAAAGGAGGGAAACTGATATTGGTTTATGATTACATGGTGAATGAGAGCTTGGACAAAAGGATCTTTGAGTGTGAGGAGACCATGCTGCTGAGCTGGGAAGAAAGAATTAGAGTTTTGCAAAATGTAGCTGATGGAATTCTATATCTACATGAGGGTTGGGAAGTTGAGGTCTTGCATAGGGACATTAAATCTAGTAATGTACTACTTGACAAGGATATGAATGCTAGATTGGGGGATTTTGGGCTTGCAAGGCTGCATCACCAGGAACATGTGGCTGACACAACAAGAGTGATAGGGACTCTGGGGTACATGGCACCAGAGCTAGTCCGAATTGGGCAACAATCAGCTGCATGTGATGTGTTTAGTTTTGGAGTATTGGTTTTAGAAGTGATGTGTGGGAGAAGACCCATCATATCAAATCAGCCTCTATTGGTTGATTGGGTGTTTTCCTTTATGGAGAAAGGAGAATTGAGTTGTGCTATTGATGAGCGTTTGAAGGGTCGAAGTGGGTATAACGCTGAAGAAGCTGATAGGCTGCTTCACTTGGGTTTGTTATGTGTAAGTACTGACCCTGGTGTTAGGCCAACAATGAGGCAAGTGGTGAAAGCATTGGAGGGAATAAAATGCACCGAGTGTAATGAAGAATGCATCCATTTGGGTTTGCTTGGAAAAATAAACTCAGCAGCATCATGGTCTAAGAGCTCTACAAGTTCTTCCAATGTAAATTATCCTACCTTTGACGAAATTTTGCAGACCAAGTTTTATTCTACAGCATCTTTAAGCATCTCTTGTCCAAGCCCACAGCTAGAGTCAGAGTTTGCCTCAGAAGGAAGGCGAGAGCTCAAGAGACAAACATTTCCATTTGTAAAGTGCAAGCACTTTTTAACCACTTTAAGTTCAGTTTCCACTACTGAATTTGTCTATAACAAAAACTTCAACTCAACAAATATCATCCCATATGGAAATGCCTCTATTCAGACCTCCATTCTGATGCTCACAAATCAAAGTTTCTTCTCCTTAGGCCCAATGATGGCAATCCTCAGAACCACGTGTTTGGAGTTGAGTTTGATCCAGTTAGAAATGAAAGAAGAGTTCAATGATATAAATGACAATCATGTTGGTGTTGATGTAAACTCGCTTCGTTCCTCAACTTCTTGTGAGGCTGGCTATTGGGGTGAAAAGATAAAAAATGGAGAAAACTATCAGGTATGGATTGAATTTATGCATTCCCAGCTTAATGTTACTATGGCTCGGGCGGGACAAAAGAAGCCTAGAGTGCCTCTTATCAGCAGTAATGTTAACCTTTTAGGGGTTGTTATGGATGAAACATACGTTAGATTCACTGCAGCAACAGGGAGGATAATAGACAGTACTAAGATTCTTGCTTGGAGTTTTAGTAATTCAAACTTTTCAATCGCTAATGCTTTAGTGGTTTTCTGGAGCACCAGCTTTAGCTACAGGTCTCACTTTGTGTGCGCGTTAATCATTGGTTGTCGTTCTGTAGTGTTTTTTATTCTCCGCAGAAGCAAGGCACAAGAAGTTAAAGACTGGGAACTGGAGTACTGGCCCCATAGGATTGGTTTCCATGACATCGATTCAGCAACAAGGGGGTTCTCTGAAGAGAATGTGGTTGCTGTAGGAGGGAACCGGAAGGTAAATAAAGGGATTTTGCATGGAGTAGAAGTTGCAGTGAAGAGAATCCCTCAAGACAAGGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAAGCCTAGGGAGAATGAAGCATAGAAATTTAGTAGGATTGAGAGGTTGGTGCAAAAAGGAAAGGGGAAATTTGATTCTAGTTTATGAGTTCATGAGAAATGGAAAGAGGATTCAAGTTTTGAAAAATGTAGCCGCTGGGATTCTATACCTGCATGAGGTTGGGAAGTTAAGGGACATTAAAGCAAATAATGTTCTTCTTGACAAGGACATGAATGCAAGACTAGGAGATTTTGGATTGGCTTGTATGCATGATCATCATGGACAAGTTGCCAGCACAAAAAGAGTAATAGGGACAATAGGATGTATTGCTCCTCAAGTGATTCGAACAGGAACCGCCTCAACTATGTCTGATGCAGTTGATGAAAGGCAGAAGGCTAAAGGGGGATACACCATGGAGGAAGCTGAGAGATTGCTTCGTTTGAGTTTGTTGTGTTCAAATTCAGATCCTAGTATTAGGCCAACAATGAGGCAAATTGTGAAAATTTTTGAGGGGGAAATGGACAGCACTGCCTCCGATGAAGAAAACATGGAGAAGTGTCTGCTTGGAAAAACAAAATCATCTCCAATGTTGTCTAGAGTTGAATGTAATTTTCCACACCGTGGTTACCCTACTTTTGATGAAATTAAGATGTTCAGTTTTAATTCTAGGACGTCTGGAAGTGGCTCAAGTACCTTTCCACGATCAGAATCAGAAATCAACAAAGAAAACAGA 3743 0.4149 MSPPTLFFLLSALQVLSLVPATEFVYNRNFNSSNVKLYENATIENSVLRLTNKTFFSIGRAFYPHKIPMKSPNSSSTVLPFSTSFIFSVAPVENFPVAHGFAFLFSPVMAVNGALSGNYLGLFNRSTSGNSSNHVFAVEFDDFRNEEFNEENDNHVGVDLNSMISLYSEPAGFWGGKDAEEWEDLKLAGGRNYQVWIEFENFEINVTMAPAGKKKPHRPLISKPINLSWVLLDEMYVGFSGATGRMVDICRILAWSFSNSNFSIGDALSTKHLPLYVHPKTSLFRSNGFIIGITFGAFFVGGFCALVVFFSLFRTRRGEKQENLEDWELEYWPHRISYQEICDATCGFSEEKVIGIGTSGKVYKGVLKGVEVAVKSINHETRHGMKEFLAEISSLGRMKHRNLVGFRGWSKRKGGKLILVYDYMVNESLDKRIFECEETMLLSWEERIRVLQNVADGILYLHEGWEVEVLHRDIKSSNVLLDKDMNARLGDFGLARLHHQEHVADTTRVIGTLGYMAPELVRIGQQSAACDVFSFGVLVLEVMCGRRPIISNQPLLVDWVFSFMEKGELSCAIDERLKGRSGYNAEEADRLLHLGLLCVSTDPGVRPTMRQVVKALEGIKCTECNEECIHLGLLGKINSAASWSKSSTSSSNVNYPTFDEILQTKFYSTASLSISCPSPQLESEFASEGRRELKRQTFPFVKCKHFLTTLSSVSTTEFVYNKNFNSTNIIPYGNASIQTSILMLTNQSFFSLGPMMAILRTTCLELSLIQLEMKEEFNDINDNHVGVDVNSLRSSTSCEAGYWGEKIKNGENYQVWIEFMHSQLNVTMARAGQKKPRVPLISSNVNLLGVVMDETYVRFTAATGRIIDSTKILAWSFSNSNFSIANALVVFWSTSFSYRSHFVCALIIGCRSVVFFILRRSKAQEVKDWELEYWPHRIGFHDIDSATRGFSEENVVAVGGNRKVNKGILHGVEVAVKRIPQDKEEGMREFLAEVSSLGRMKHRNLVGLRGWCKKERGNLILVYEFMRNGKRIQVLKNVAAGILYLHEVGKLRDIKANNVLLDKDMNARLGDFGLACMHDHHGQVASTKRVIGTIGCIAPQVIRTGTASTMSDAVDERQKAKGGYTMEEAERLLRLSLLCSNSDPSIRPTMRQIVKIFEGEMDSTASDEENMEKCLLGKTKSSPMLSRVECNFPHRGYPTFDEIKMFSFNSRTSGSGSSTFPRSESEINKENR 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02730 1232 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 310 423 - -
Pste3g02730 1232 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Pste3g02730 1232 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 260 IPR013320 -
Pste3g02730 1232 Gene3D Phosphorylase Kinase; domain 1 311 423 - -
Pste3g02730 1232 Gene3D Phosphorylase Kinase; domain 1 913 1023 - -
Pste3g02730 1232 SMART serkin_6 348 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02730 1232 CDD lectin_legume_LecRK_Arcelin_ConA 22 260 IPR001220 GO:0030246
Pste3g02730 1232 SUPERFAMILY Concanavalin A-like lectins/glucanases 773 1014 IPR013320 -
Pste3g02730 1232 Gene3D Transferase(Phosphotransferase) domain 1 1024 1163 - -
Pste3g02730 1232 Pfam Legume lectin domain 774 881 IPR001220 GO:0030246
Pste3g02730 1232 Pfam Legume lectin domain 22 261 IPR001220 GO:0030246
Pste3g02730 1232 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Pste3g02730 1232 FunFam L-type lectin-domain containing receptor kinase S.4 424 628 - -
Pste3g02730 1232 ProSiteProfiles Protein kinase domain profile. 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02730 1232 MobiDBLite consensus disorder prediction 1211 1232 - -
Pste3g02730 1232 FunFam L-type lectin-domain containing receptor kinase S.4 20 265 - -
Pste3g02730 1232 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 912 1025 - -
Pste3g02730 1232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Pste3g02730 1232 ProSitePatterns Protein kinases ATP-binding region signature. 354 375 IPR017441 GO:0005524
Pste3g02730 1232 Gene3D - 771 904 - -
Pste3g02730 1232 SUPERFAMILY Protein kinase-like (PK-like) 931 1160 IPR011009 -
Pste3g02730 1232 PANTHER - 41 618 - -
Pste3g02730 1232 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02730 1232 Pfam Protein kinase domain 958 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02730 1232 Gene3D - 20 270 - -
Pste3g02730 1232 ProSiteProfiles Protein kinase domain profile. 950 1232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02730 Pste-Chr3 20130800 20135919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02730 19 570 Receptor kinase-like Gene Family AT4G04960 54.659 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste3g02730 Pkinase 1.2e-44 CL0016