Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02723 TAAAATTCCACCTCTCCAATAACCATATCTTCTTCTCCCTCTAACTTCCGTCTCACTGCTCTCTCCACACTCACCCGTCCGATTCCAACCCCCGCACCCTACTTCTGCTATTCTCCAACTGTTCTTTCTTCCTTCGCTCTTTTTTTCTTTTTATGAAGCCTCCTTGGCTCTGATTTTTTACTTATTACTTTTCGGCTCGATAAAATAGTTTAGATTATTTGGTACGTAAGTTAAAGCAAACAGTGTCTGTGAATAATGGATGTTCCTGAGGTTGAGGAAAATCTGTTTGCCGCAAGTGATGCCAAGTTACATGGACAGATGTGCAAGACTCTTTCTATAATATATTGCAAAGTATTGTCTGTATTTCCTTCTTTAGAAGCTGCTAGACCCAGGAGTAAATCTGGTATTCAGGCATTATGTTCATTGCATGTAGCCCTGGAGAAAGTCAAGAATGTTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGGAGATTCTGTCCTTCTAAAATTTGAGAAGGCTAAATGTGCTCTTGAAGATAGTCTTAGACGAGTGGAAGATATTGTTCCACAATCTATAGGGTGTCAGGTTCAGGAGATTGTGAATGAATTTGCAACAACAGAATTCACACTTGACCCATCAGAGAAGCAAGTTGGTGATGATTTAATTGCATTGCTCCAACAGGGAAGAAAGTGTAACGATTCTAATGACAGCAATGAGCTTGAATCTTTTCACCAGGCTGCTACTAGAGTTGGAATTACATCTTCAAGAGCAGCTCTTGCTGAAAGAAGAGCTCTCAAGAAACTCATAGAAAGGGCTCGATCTGAGGATGACAAGCGGAAGGAATCTATTATCGCATATCTTTTACATCTTATGAGGAAATATTCGAAGTTATTTAGAAGTGAGTTCTCAGATGACAATGATTCTCAGGGTTCTGCGCCTTGTTCTCCCACTGTTCTGGGATCCATCGAGGATAATGTTCCTGGTAGTCATTGTCAAGCCTTTGACAGACAGCTTTCAAAATTAAGTTGCTTTAATTTCAATCCTAATAATAGTAGGAAATCAGGGCAGATGCAGATGCCTCTTCCACCTGAAGAATTAAGGTGTCCAATATCTCTGCAACTTATGTATGATCCTGTTATCATTGCTTCTGGGCAAACATATGAAAGGGTTTGTATTGAGAAATGGTTCAGTGATGGGCACAACAACTGCCCAAAGACCCAGCAGAAACTTTCACATCTTTGTTTAACTCCTAATTACTGTGTTAAGGGCCTTGTTGCTAGTTGGTGTGAACAAAATGGAGTTCCTATTCCTGAAGGCCCTCCTGAATCTCTTGATCTTAACTACTGGGGATTGGTACTATCAGAGTCTGAATCTACAAATTCAAAATCTGTAGATAGCGTCAGCTCTTGCAAGTTGAAGGGTGTCCAAGTGGTTCCCCTGGAAGAGAGCATTATCTCAGAGGTATCCGTGGAAAATGGAACTGAAAGTGTTTCTGCACAAGAGGAAGACCGTGAGCAGTATTTTAGCTTTCTGAAAGTCTTGACTGAGGGGAACAATTGGAGGAAGCAATGTGAAGTGGTAGAACAGTTAAGGTTGTTGCTGAGGGATGATGAGGAAGCCAGGATTTTTATGGGGGCTAATGGATTTGTTGAAGCATTTTTGCTGTTTATGCAATCAGCTATGCGTGAAGGTAGTCTAATGGCTCTGGAAAGTGGAGCAATGGCTCTCTTCAACTTGGCTGTGGATAATAACAGAAATAAAGAAATTATGTTATCAGCTGGAGTATTATCATTGTTGGAGGAAATGATTTCTAAAACTAGTTCTTATGGTTGTTCAACTGCTCTTTATTTGAATCTCTCTTTCCTTGAAGAAGCCAAGTCTATGATTGGCACGAGTCAGGCTGTCCAGTTCCTAATCCAGCTTCTTCAATGTGACTCTGATGTTCAATCCAAGCAAGATTCTCTCCATGCTCTCTATAATCTTTCTACTATGCCCTCCAATATTCAATACCTCCTTTCGTCTGGCATCATTAGTAGTTTACAATCCCTTCTTGTAGGCGAGGGTGATTGCATGTGGACAGAAAAATGTATAGCTGTTTTGATAAATTTAGCTACTTTTCAAGTTGGTAGGGAGGAAATTGTATCCGCTCCTGGAGTCATTAGTGCACTGGCTTCGATATTGGATACTGGTGAGCCCTTAGAACAGGAGCAAGCTGTTTCTTGTCTCCTAATTTTGTGCAATAGAAGTGAGGAATGTAGTGAGATGGTCCTGCAAGAAGGGGTTATCCCAGCATTGGTTTCAATATCAGTGAATGGGACCCCAAGAGGTAAAGAAAAAGCTCAGAAACTGTTGATGCTGTTTCGCAAGCAGCGACGGGACCAATCACCAGTTAAGACACATCAGTGCCCACCTGAAACTAGTGATTTGTCCATATCACCTGCTGAAATGAAACCTCTATGCAAGTCTATTTCGAGAAGAAAGTCTGGGAGAGCTTTTAGCTTTTTCTGGAAAAGCAAGGCCTATTCTGTTTACCAGTGTTAAGTTCCATTGGTGGTTGTTGTAAATCTGTGTTAGCATCTTTACTTTTATGGTTGTGCTTTTATCCCTCCTCTACTTCCTGTTCCCGGGGGTGCTACTTATTTTTTTGTTCAAAGCGAAGAAGAGATGTACAGGCCTGTAATTTATGGATTTTGTTTTCTTCTTTCGCTTTCCTCTTTGTAATATCAATTTCCGCAAGTCTGTC 2758 0.4083 MDVPEVEENLFAASDAKLHGQMCKTLSIIYCKVLSVFPSLEAARPRSKSGIQALCSLHVALEKVKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALEDSLRRVEDIVPQSIGCQVQEIVNEFATTEFTLDPSEKQVGDDLIALLQQGRKCNDSNDSNELESFHQAATRVGITSSRAALAERRALKKLIERARSEDDKRKESIIAYLLHLMRKYSKLFRSEFSDDNDSQGSAPCSPTVLGSIEDNVPGSHCQAFDRQLSKLSCFNFNPNNSRKSGQMQMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNNCPKTQQKLSHLCLTPNYCVKGLVASWCEQNGVPIPEGPPESLDLNYWGLVLSESESTNSKSVDSVSSCKLKGVQVVPLEESIISEVSVENGTESVSAQEEDREQYFSFLKVLTEGNNWRKQCEVVEQLRLLLRDDEEARIFMGANGFVEAFLLFMQSAMREGSLMALESGAMALFNLAVDNNRNKEIMLSAGVLSLLEEMISKTSSYGCSTALYLNLSFLEEAKSMIGTSQAVQFLIQLLQCDSDVQSKQDSLHALYNLSTMPSNIQYLLSSGIISSLQSLLVGEGDCMWTEKCIAVLINLATFQVGREEIVSAPGVISALASILDTGEPLEQEQAVSCLLILCNRSEECSEMVLQEGVIPALVSISVNGTPRGKEKAQKLLMLFRKQRRDQSPVKTHQCPPETSDLSISPAEMKPLCKSISRRKSGRAFSFFWKSKAYSVYQC 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02723 766 SUPERFAMILY ARM repeat 430 707 IPR016024 -
Pste3g02723 766 Pfam U-box domain 283 352 IPR003613 GO:0004842|GO:0016567
Pste3g02723 766 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 281 355 IPR013083 -
Pste3g02723 766 SMART arm_5 457 501 IPR000225 GO:0005515
Pste3g02723 766 SMART arm_5 542 583 IPR000225 GO:0005515
Pste3g02723 766 SMART arm_5 584 625 IPR000225 GO:0005515
Pste3g02723 766 SMART arm_5 626 667 IPR000225 GO:0005515
Pste3g02723 766 SUPERFAMILY RING/U-box 282 357 - -
Pste3g02723 766 SMART Ubox_2 285 348 IPR003613 GO:0004842|GO:0016567
Pste3g02723 766 FunFam RING-type E3 ubiquitin transferase 281 355 - -
Pste3g02723 766 Coils Coil 175 195 - -
Pste3g02723 766 ProSiteProfiles U-box domain profile. 281 355 IPR003613 GO:0004842|GO:0016567
Pste3g02723 766 Gene3D - 402 718 IPR011989 -
Pste3g02723 766 PANTHER U BOX DOMAIN-CONTAINING 21 711 - -
Pste3g02723 766 CDD RING-Ubox_PUB 283 335 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02723 Pste-Chr3 20020600 20025334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02723 1 765 U-box Gene Family AT1G24330 65.641 0.0 1010
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02723 3 20020600 20025334 Pste3g02723 3 20020600 20025334 ECH
Pste7g02389 7 22647637 22652816 Pste3g02723 3 20020600 20025334 PCT