Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02720 GAAAAGTCGTCAACAACTACCTCTGAGACAGTCTCTCAGAAACAAAAATATGGTCCAAACCCAAATTCGAAACCAGAATTTTTTATTGTTACTATTACTCATAGTTTATTAGTACAACCTAAGTTAAATTCGGTGCAAAGCTAAGCTGGTGAAGGCATCTTTTTTGCTTCTAAAATTGCATTTGGTGACCAATTAAGTCGTTGGTCTTTCGCTTTCTTTATCTGATCAAGCTCCCCCTGACCCTTTTGACTTCTTCTGAAGCAACCCTTTTATTATTGCCTCCTTTTTAAGCTATTTGCTATGGTGGGTCTTGGGTTCTTCCCCTGTATTCAATCTGGTCAACGTCAACTGAGAACTGGGTCATTGAATTGGAGTTGAATTTTGGGGATTTGATATGGTTTCCACTCAAAGATTGGAGCTTTGTTTGAGTAAGAGGAGGAGGGAGCTGGAAATTTTGTTGCGGATTGCATTTGGGTGGTGGGTGGTTCTGCAGTTAGTTGATCCTGTGGCGGGTCTCAGACCCTTGAGGGAGAGAGCTAGGTCCTGGGATGATGAGAATGTTTATGCGTGGTTTGGGGAGAGAATGGATGAGGAGCAGGATAGGGAAAGTGCTGCATTGAACCAGCACTTACGTGGAATTCTATTCACTAGAAAGGATGAGGGCAACATAGGTCCATTTTCTCAATGGAACATAACAGGAACGTACAAAGGAAACTGGAAGTTTTTAGATACCACAAATGGCTCTTCCAGATTTCCAGACATCAGAAAAACAAATGGCAATTCGGTAATTGAACTAGTTAGTACGCCCACAAAGATAAGTGGAGTACATTATGTTCAGGGAGTACTTATATTCCATGATGCGTTTGACAATGAATATGATGTTGGTGGTGCTCAAATCAGAATAGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGGTAGCCAACAGTGGAAAAGAGGGAGAGTTGAATCAGAACGAAGATTACATTTTATCTAATCCGTATCATCTGCTTGGAGTTTTCTCTTCTCAGGTACTGCAAGATTCTTCACGTGATAAGATGTGGAGAAGAAAACATTCTCTGGTTCATGACATGGAGAAGCATTGTAATATTGAAATTGCTGCTCAGATTTCACGCATGCCATCATCAAATAATGAAGGTGAACGTGATCATTTTCATCTAGAAGGGTTAATGGAGAGTCCCTCAGCAGATAATGATGAGGACTGCTTCTCACCATTACTTTTAAATGCAACATCTGTCAAAGTTGAGGTCTACTATAACAAAGCAGTGAACTATACTTTGATGGTCACTTTTGGTGCTGCTAAGGTTTCAATGTTAATGATTGGCCAGCAAGCAATAATGGATGCCTATCTGTGCCTTATACATCTGACTGCTGGAATACTAGTTGAATCTTTATTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTTGTAGTTTTCTCAATATTTGAAATGAGATACCTCCTTGCTATCTGGAAGGCAAGTAGGCCTTTGAGTAACGGGGAAGGTTGGGAAACAATGAGACGAGAACTTTCAGTTTTATACAGTCGTTTCTATGGGATCTTGTTGGGAGGCATTCTCTTCATGTACGAGTTTCATAATTATTTGAGACCTATCCTTCTTTTGATGTACTCTTTTTGGATACCTCAGATAATCACTAACGTTATTCGTGATTCACGTAAACCATTGCATCCTCATTATATCTTAGGGATAACGGTTACTCGGCTAGCAATCCCACTATATATTTTTGGTTGTCCTAACAACTTTATGCGCATAGAATCAGACAAGAGCTGGTGTGTCTGTTTGGCTGTACTTCTTGGACTTCAAGCTGCAATTCTCCTACTTCAGCACTATCTTGGGTCACGTTGGTTCATTCCTCGTCAGGTTGGACCCAACTTTCTTCTTGATACTTTTATTCTCCCTGAGAAATACAGCTATTATAGGAGATTTGATCAGGATACAAGACATGCTACAGACTGTGTTATTTGCATGACAGCCATTGATCTGTCCCAGCGATCTAATGATTGCATGGTGACACCTTGTGATCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCTACTTGCCGGCGCCCCCTGCCCCCTGCCTAGAGACCTTTCTTCGCTGTTTATGTCAATAGGATCAACTGACCCTGCTCAACTTCACAGTTTTAGTGTATGCTTAAATGACCAAGTTTTACATTGCTTTGCTTTTAATATAACGAGAGAAGTGAAACCACACAGGCTTCGGCGGTGGTCAACCTTTTCTTCTGATGGAGGACTGGATATTTCTTCTGCTCATACAAATTTTGTAATTTGATTTTCCCATCTTATCTAAGATACCGAGGGTATGATTTTTGTACATAATTTGGAAGGGCGATGAACATTAATTGTACTCTTTTTTTCTCAATACCAATTTTTTTATTCTTCCTTGGTGATTGTCCAAGATTC 2497 0.4005 MVSTQRLELCLSKRRRELEILLRIAFGWWVVLQLVDPVAGLRPLRERARSWDDENVYAWFGERMDEEQDRESAALNQHLRGILFTRKDEGNIGPFSQWNITGTYKGNWKFLDTTNGSSRFPDIRKTNGNSVIELVSTPTKISGVHYVQGVLIFHDAFDNEYDVGGAQIRIEGVYIWPFRQLRMVANSGKEGELNQNEDYILSNPYHLLGVFSSQVLQDSSRDKMWRRKHSLVHDMEKHCNIEIAAQISRMPSSNNEGERDHFHLEGLMESPSADNDEDCFSPLLLNATSVKVEVYYNKAVNYTLMVTFGAAKVSMLMIGQQAIMDAYLCLIHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSVLYSRFYGILLGGILFMYEFHNYLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYILGITVTRLAIPLYIFGCPNNFMRIESDKSWCVCLAVLLGLQAAILLLQHYLGSRWFIPRQVGPNFLLDTFILPEKYSYYRRFDQDTRHATDCVICMTAIDLSQRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02720 587 SUPERFAMILY RING/U-box 519 586 - -
Pste3g02720 587 CDD RING-H2_TUL1-like 531 586 - -
Pste3g02720 587 SMART ring_2 537 580 IPR001841 -
Pste3g02720 587 FunFam E3 ubiquitin-protein ligase, putative 523 587 - -
Pste3g02720 587 SMART ringv_2 536 581 IPR011016 GO:0008270
Pste3g02720 587 PANTHER RING ZINC FINGER PROTEIN 133 586 - -
Pste3g02720 587 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 523 587 IPR013083 -
Pste3g02720 587 Pfam Ring finger domain 536 581 IPR001841 -
Pste3g02720 587 ProSiteProfiles Zinc finger RING-type profile. 537 581 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02720 Pste-Chr3 19982524 19993857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02720 509 587 C3H Transcription Factor Family AT2G35420 31.646 7.67e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02720 3 19982524 19993857 Pste3g02720 3 19982524 19993857 ECH