Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02709 GAACACGCGTATACAATTTCGTATAGGTGCAGTGCAGTGCAGAAAGGTCGTTCGACGTTCATAGCCTCAGATGCTCAGAATTCAACAATGAAGCGTTATGCTTACATTGATGATGATGAATCATCTAATGATATGTACTGTGATAATCGTATATCAAACAGAAAATATACTGTATTAAACTTCATTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGTTATGGCCTCTCATTACTCCGGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCTGTCTCTGCATCAAAAGAGGCATGGGACGATTACAATAGATATCTTTCAGACAAAAAAGCAAATGAGAAGGAAGTCTGGGTTGTCAAGAAGGGCATCAAGAAACATATCCAAGCCCAGGATATTAATGTAGGTAATATTGTATGGCTACGTGAAAATGATGAAGTTCCTTGTGACCTTGTTTTGATTGGCACCTCTGATCCTCAAGGAGTTTGCTATATAGAGACAGCTGCACTGGATGGTGAAACTGATCTGAAGACACGGGGTGTAATTGAGTGTCCCTGTCCAGATAAAGACATCAGGAGATTTGACGCAAACATGCGGTTGTTTCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACCATTCTTCAGTCATGCTACTTGAGAAACACTGAGTGGGCATGTGGAGTGGCTGTAGGTATACCAGAACCAAAGCTCACTGCTATGGATGCCATGATTGACAAGTTGACTGGTGCTATATTTATATTCCAAATTGTTGTTGTTCTGGTTCTTGGCATAGCAGGTAATGTTTGGAAGGATACAGAAGCTATGAAGGTATGTCACAATTTTGGAACGTTGGTTTGGCATGTTGCTTCCTTTGGGTTTCTCATGGAGTTTTACTTGAGTCTATGGTATGTTCTTTACCCTCCTGAAGGGCGTTGGTATGAGCTGTTGGTCATTCCTTTGCGATTTGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTGGTGAAGAGCTTGTATGCAAAATTCATTGACTGGGACCATCAAATGATTGACCTAGAGACTAACATTCCATCCAATGCAACAAATACAGCGATAAGTGAGGATCTGGGACAGGTGGAGTACATTTTGACTGACAAAACAGGCACCCTGACTGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCAATTTCTATGGAAATGAGAATGGAGATGCATTGAAAGATGTAGAGCTTATCAATGCCATTTCCAGTGGTTCTTCTGATGTTGTACGATTTCTTACAATTATGGCAATATGTAATACCGTTGTTCCCATGCAAAGCAAAACTGGAGATATCTTGTATAAGGCTCAGTCTCAGGATGAGGATGCCCTTGTTCATGCTTCTGCTCGATTGCATATGGTTTACTTTAACAAGAATGGAAATATTCTTGAAGTCAAGTTCAACTCTTCAATACTTCAGTATGAAGTCCTGGAAATCTTAGAGTTCACCTCTGATAGGAAAAGAATGTCAGTAGTATTGAAAGATTGCCAAAATGGAAAGATCCTTCTCTTGTCAAAAGGAGCAGATGAGGCTATTCTTCCATATGCTCGTGCTGGGCAGCAGACCCGACATTTCATTGAAGCTGTGGAGCAATATGCTCACTTGGGCTTACGTACATTATGTTTGGCTTGGCGTGAGTTAAAGCGAGATGAATATCGAGAATGGTCTTTAATGTTTAAAGAGGCCAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGTCAACGAGTAGAACATGACTTGGAAATTCTTGGTGTAACAGCAATAGAGGATCGTTTACAGGATGGAGTGCCTGAAACAATAGAAACACTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACTGGAGACAAACAGAATACTGCAATACAAATTGCTCTGTCATGTAATTTTATTTCACCAGAACCAAAGGGACAGCTTCTATCAATTGATGGCAAAACAGAGGATGAGGTTTATAGGAGTTTAGAGAGAGTGCTCCGTACTATGCGGATGACTACCTCAGAACCCAAGGATGTGGCTTTTGTGGTTGATGGCTGGGCCCTTGAGATTGCACTTACTCACTATCGTAAAGCTTTCACTGAGCTGGCAATTTTGTCAAGGACTGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGATATTAAAATCCTGTGATTATAGAACATTGGCTATTGGTGATGGTGGGAATGATGTAAGGATGATACAGCAAGCTGATATTGGTGTGGGGATCAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCGGCTGATTATAGTATTGGAAGTGTCTCTGGAACCAGCCTGTTCAATTCTGTTAGCTTGATGGCCTATAATGTTTTCTACACTAGTGTTCCTGTTCTAGTCAGCGTGCTTGACAAAGATCTTACTGAGGAAACTGTGATGCAACACCCTCAAATTTTATTTTACTGCCAAGCTGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGTAAGTGCTGTTTGTTAGCATAGTTTTGGCATTTAAAAGTTGATAT 2674 0.4058 EHAYTISYRCSAVQKGRSTFIASDAQNSTMKRYAYIDDDESSNDMYCDNRISNRKYTVLNFIPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDINVGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRGVIECPCPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAMKVCHNFGTLVWHVASFGFLMEFYLSLWYVLYPPEGRWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETNIPSNATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELINAISSGSSDVVRFLTIMAICNTVVPMQSKTGDILYKAQSQDEDALVHASARLHMVYFNKNGNILEVKFNSSILQYEVLEILEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQTRHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVYRSLERVLRTMRMTTSEPKDVAFVVDGWALEIALTHYRKAFTELAILSRTAICCRVTPSQKAQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGSVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLTEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHVSAVC 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02709 881 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 877 IPR023298 -
Pste3g02709 881 PRINTS P-type cation-transporting ATPase superfamily signature 651 661 - -
Pste3g02709 881 PRINTS P-type cation-transporting ATPase superfamily signature 181 195 - -
Pste3g02709 881 PRINTS P-type cation-transporting ATPase superfamily signature 402 416 - -
Pste3g02709 881 PRINTS P-type cation-transporting ATPase superfamily signature 770 789 - -
Pste3g02709 881 SUPERFAMILY Calcium ATPase, transduction domain A 129 250 IPR008250 -
Pste3g02709 881 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 409 596 IPR023299 GO:0000166
Pste3g02709 881 FunFam Phospholipid-transporting ATPase 625 809 - -
Pste3g02709 881 Pfam Phospholipid-translocating ATPase N-terminal 36 99 IPR032631 -
Pste3g02709 881 Pfam Phospholipid-translocating P-type ATPase C-terminal 807 878 IPR032630 -
Pste3g02709 881 FunFam Phospholipid-transporting ATPase 472 615 - -
Pste3g02709 881 SUPERFAMILY HAD-like 391 808 IPR036412 -
Pste3g02709 881 SFLD C1.7: P-type atpase like 387 807 - -
Pste3g02709 881 FunFam Phospholipid-transporting ATPase 104 260 - -
Pste3g02709 881 Gene3D - 108 254 - -
Pste3g02709 881 Gene3D - 473 627 IPR023299 GO:0000166
Pste3g02709 881 Pfam haloacid dehalogenase-like hydrolase 400 723 - -
Pste3g02709 881 SFLD p-type atpase 387 807 IPR044492 -
Pste3g02709 881 Gene3D - 628 807 IPR023214 -
Pste3g02709 881 NCBIfam HAD-IC family P-type ATPase 622 684 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g02709 881 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Pste3g02709 881 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 807 - -
Pste3g02709 881 Pfam E1-E2 ATPase 128 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02709 Pste-Chr3 19908489 19923312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02709 30 876 Primary Pumps ATPases AT5G44240 77.514 0.0 1452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02709 3 19908489 19923312 Pste3g02709 3 19908489 19923312 ECH