Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02695 CAAAAACATGAAAACCTTTCTCTTGTGATTCTCGACCTAATTGTGGTGGAGAGAGATCCCAGCTAGCCACACTCCCTTGTCACTTCCAAAATAGGCAACACATTAATCTTCTTGTACATATCTCTCAGCTTAATTTATGGATTTTCATGCACCGGCATATATCTGAGCACTGCTTATCTTATATACTATACACCTTTATATAAGTGGAGTTTTCGTTTTTATTACATTTACTCCAACAAGGATTGAAATATAGGACTATTCATGTTGGCGGTGTCACCTTTGAGGAGCACAAGAGATGATCATGAAGGGCAAGGAGAAATGGAGAGTTTCTCTATCGGAACCGATGACTTTGCCGACCTTACAGAAGTGAACTTACTTGAAAGCATCAACTTCGATGATCTCTTCATGGGAATCAATGATGACGAAGATCTCTTGCCGGATCTGGAGATGGACCCTGAAATGCTTGCCGAGTTCTCCCTCAGTGAGGAATCAGAGATGGCTTCATCAGTTTCAATGGCAAATAAAAAATCTGATAACAACAATGGGAATATAGTTACTACAGAAAAACAAGATGAAGTTATAGCAGCCAATTCTTCTTCAGATTCGGCTACCAATTCTGGTTCAAGTCGAGGGGAGGAGATAGTAAGCAAGCGTGATGAATCAGTGGTGGTGAATCCATCCCCTAAGAAAAGTGAGAAAGGAAGAAAATCTTCAACTCATTCAAGGAATAATCCTCAAGGGAAGAGAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGGTTCGTGCAAGCAGTGGAGCAGCTAGGAGTGGATAAGGCTGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGCCTCACCCGTCATAACATCGCCAGCCACCTTCAAAAATATCGATCACATAGGAAGCATTTGCTAGCGCGTGAAGCAGAAGCAGCAAGGTGGAGTCAAAGGAAGCAAATGTTGGGGGTAGCAGGTGTGGGTAGAGGAGGCAAGAGAGATATTAACCCTTGGCTTGCACCAACCATGGGTTTCCCTCCCATCACACCAATTCACCATTTTAGACCTTTACATGTGTGGGGCCATCACCCCGTGGACCAGTCCTTCGTGCACATGTGGGCTAAACATCTACCATATTCCCCGTCGCCACCGCCACCTCCGGACCCTATATATTGGCATCAACATCAACGGGTTAACTCTTTTAACTTCTCTTTCTTTTAG 1230 0.4398 MLAVSPLRSTRDDHEGQGEMESFSIGTDDFADLTEVNLLESINFDDLFMGINDDEDLLPDLEMDPEMLAEFSLSEESEMASSVSMANKKSDNNNGNIVTTEKQDEVIAANSSSDSATNSGSSRGEEIVSKRDESVVVNPSPKKSEKGRKSSTHSRNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARWSQRKQMLGVAGVGRGGKRDINPWLAPTMGFPPITPIHHFRPLHVWGHHPVDQSFVHMWAKHLPYSPSPPPPPDPIYWHQHQRVNSFNFSFF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02695 322 MobiDBLite consensus disorder prediction 125 152 - -
Pste3g02695 322 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 314 IPR044825 GO:0003700|GO:0045893
Pste3g02695 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 219 IPR017930 -
Pste3g02695 322 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g02695 322 NCBIfam myb-like DNA-binding domain, SHAQKYF class 163 217 IPR006447 GO:0003677
Pste3g02695 322 SUPERFAMILY Homeodomain-like 161 220 IPR009057 -
Pste3g02695 322 Pfam Myb-like DNA-binding domain 166 215 IPR001005 -
Pste3g02695 322 Gene3D - 160 221 - -
Pste3g02695 322 MobiDBLite consensus disorder prediction 75 124 - -
Pste3g02695 322 FunFam Two-component response regulator 159 222 - -
Pste3g02695 322 MobiDBLite consensus disorder prediction 73 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02695 Pste-Chr3 19840355 19842204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02695 1 310 G2-like Transcription Factor Family AT5G44190 40.762 7.84e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste3g02695 Myb_DNA-binding 3.6e-08 CL0123