Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02691 AGGCAGTAAGTAGTCCTGATTTTGACTAGAGAGTAGAGATTAATAATATGATATATCTACCCACACAGCCATTTCATGATTTGGATACACATCCTAATGCTACGTATTTCATCTTCAACTTCTATGTAGCTTCTTCTTCCTTCACTCTGAAACACTAACACTTGACACAACCATGCTTCAACCACTTCTCTTTCTCTTCCTCTCCCTAACCTCCACTCTCTCTCTAAACCAAGACGGTCTCTTCCTCCTCCATGCAAAGCTCCAACTCTCCGACCCAACCAACGCGCTTTCCAATTGGAACCACCGAGATGCCACCCCATGCAACTGGACCGCCGTCACCTGCGACGCCGCCATCGCCGCAGTCACCGCCCTCCACCTCTCCGACCTCCAACTCTCGGGCCCCGTCCCCTCCTCCGCCCTCTGCCGCCTCCCCAAACTCTCCTACCTCTCCCTCTCCAACAACAATCTCAACGCCACCCTCTCCGCCACCGCGTTCGCCGACTGCACCTCCCTCAGCCACCTCGACCTCTCCCAGAACCTCATCTCCGGTCCCATCCCCCACCTCCACCTCCTCCCCTCCCTCACAACCCTCGACCTCTCCTCCAACAACTTCTCCGGCGAGATTCCGGCCAGCTTCGGCCAGTTCCAGCGACTCCAATCTCTCTCCCTCGTCAGCAACCTCCTCAACGGAACCATTCCCTCTTCCCTGGGCAACATTTCCACCCTCACAAATCTTCACCTCGCTTACAACATTTTCTTCAACCAAGGGCCCATTCCGACTGAGTTCGGGAACCTCACCAATCTCGAGGATCTCTGGCTCGCAGGGTGTAACCTTGTGGGTCCCATCCCTCCTTCGTTGGGGAAGTTAACCAAGCTTTCCAACCTCGACTTGTCCCACAACAACCTCGTGGGAAACATACCAGAACAACTCCTGTTGGGTTTGCACAGCATTGTACAAATCGAACTCTATGAGAACGCTCTCTCCGGCCCGTTGCCACGCGCCGCGTTTCGCAACCTTACTAACTTAGAACGATTCGATGCCTCCACCAACCAGTTGACTGGGACTATTCCCCAAGAGCTGTGTGGGTTGAACAAACTCGGCTCCCTCAACCTGTACTCTAACAAACTCCGTGGTTCTTTGCCGGAGAGTATATTGAAACCGGACAACTTGTACGAGTTGAAGTTGTTCAACAACTCCCTCACTGGGTCCTTGCCCAGTGGGTTGGGTGCAAACTGCAAGTTGCAGAGAATGGATGTTTCGTACAACCGATTCTCCGGCCAGATTCCGGCTGGGTTGTGCGCCGGGGGAAGGTTGGAGGAGCTGATTCTGATTTACAATTCGTTTTCCGGGAGTATTCCCGAGAGTCTCGGGAAATGCAAGAGTTTGAGGAGGGTTCGACTTAGGAATAATAACCTTTCTGGTGTTGTGCCTGAGGGGTTATGGGGTTTGCCCCATTTGTATTTGCTTGAGCTTGTTGAGAATTCTCTTTCTGGTTCCATTTCTAATTCAATTTCCGGGGCTTGGAATTTGTCAATTTTGTTAATTTCTGGGAATAAGTTTTCTGGGTCCATTCCTGAGGGGTTTGGGGATTTGTTTAATCTTGGAGAGTTTGTTGCTGATCATAATAATCTTACTGGTCGAATTCCGACAAGTGTGGTTAGGTTGAGTCATTTGGATAGGCTTATTCTCAGAGACAATCAGCTTTTCGGAGAGATTCCTGTTGGAGTTGGTGGTTGGAAGAAGCTCAATGAGCTTGATTTGGCCAATAATAGGTTAGATGGGAGTGTTCCTAAGGAGTTAGGGGACTTGCCGGGGCTTAATTATCTTGATCTTTCTGGGAATCGTTTCTCTGGTGGGATTCCAATTGAGCTGCAGAATTTGAAGCTTAATTTGTTGAATTTGTCCAACAATCTGCTTTCTGGGGAAATTCCTCCTCTTTATGCCAATGAGAATTATAGGAAGAGTTTTTTTGGGAATCCAGGTTTGTGTAGGGCTCTCTCTGGATTATGTCCAAGTTTGGATGAGAATGAGGGTAAGAGCAGGAAGTATGTGTGGATTTTCCGGTTCGTATTTGTGCTTGCCGGGATTGTGTTAATTGTTGGGGTGGCTTGGTTTTACTTCAAATTCCGGGACTTCAAGAAGATAAAAAAGGGATTTCACATTTCGAAGTGGAGATCGTTTCATAAGCTGGGGTTTAGTGAGTTTGAGATTGTTAAATTGCTGATTGAGGATAATGTTATTGGTAGTGGAGCATCTGGGAAGGTTTACAAAGTTGTGTTGAGCAATGCCGAGGTGGTGGCAGTGAAGAAATTATGGGGAGCAACTAACGTGGGAAGTGGATTTGTTGATTCTGAGAATGATGGATTTGAAGTAGAGGTTGAAACATTGGGAAAGATTCGACACAAGAATATTGTGAGATTATGGTGCTGCTGCAACAGTAGGGATAGCAAGCTCTTGGTTTATGAGTACATGCCAAATGGGAGCCTGGCTGATTTGTTGCACAGTAGCAAGAAAGGCTTGTTGGATTGGCCCACCAGATATAAAATTGCTATTGATGCTGCTGAGGGGCTTTCATATTTGCATCATGATTGTGTCCCCCCTATTGTTCATAGGGATGTTAAATCTAGCAATATCTTGCTAGATAATGAATTTGGAGCAAAAGTTGCCGATTTTGGAGTTGCCAAAATATTTAAGGGAGCCAACCAAGGGGCAGAATCCATGTCTGTGATTGCTGGATCTTACGGTTACATTGCACCTGAATACGCTTATACTCTAAGGGTGAACGAAAAGAGTGATATTTATAGCTTTGGTGTGGTCATTTTAGAATTGGTAACTGGGAAGCCCCCTCTTGATCCGGAGTACGGGGAAAAGGATCTAGTAAAATGGGTTTGCTCCACATTGGATCAGAAAGGACAGGATCAGGTGATTGATCCCACTCTGGATATTCAATGTAGGGAAGAAATCAGCAAGGTGCTCAGCGTGGGGCTTCTTTGCACTAGTTCTCTTCCTATAACTCGCCCTTCAATGCGTAGAGTGGTGAAAATGCTGAAGGAAGTAACTCAACTTCCCAAATCCTTAAGTGGAAAACTCTCTCCATATTTTCAGGAAGAGGCCTCGGATAATAATCATCATGGAAGCTTAGTTTGAGCTACATGCTGAAAATCAAAATAATTATCTTCAATTTTCACTTCAGCTTTTGGTACTTTGAAGTTAGTTTTTGATTAGGCAATAGTGTACATGAAACAGCAATTGTAAGAAATGGCAAGAAATTTCCAATTTCACTTGCGTCATTTTGTCTTTAATTCCAG 3309 0.4627 MLQPLLFLFLSLTSTLSLNQDGLFLLHAKLQLSDPTNALSNWNHRDATPCNWTAVTCDAAIAAVTALHLSDLQLSGPVPSSALCRLPKLSYLSLSNNNLNATLSATAFADCTSLSHLDLSQNLISGPIPHLHLLPSLTTLDLSSNNFSGEIPASFGQFQRLQSLSLVSNLLNGTIPSSLGNISTLTNLHLAYNIFFNQGPIPTEFGNLTNLEDLWLAGCNLVGPIPPSLGKLTKLSNLDLSHNNLVGNIPEQLLLGLHSIVQIELYENALSGPLPRAAFRNLTNLERFDASTNQLTGTIPQELCGLNKLGSLNLYSNKLRGSLPESILKPDNLYELKLFNNSLTGSLPSGLGANCKLQRMDVSYNRFSGQIPAGLCAGGRLEELILIYNSFSGSIPESLGKCKSLRRVRLRNNNLSGVVPEGLWGLPHLYLLELVENSLSGSISNSISGAWNLSILLISGNKFSGSIPEGFGDLFNLGEFVADHNNLTGRIPTSVVRLSHLDRLILRDNQLFGEIPVGVGGWKKLNELDLANNRLDGSVPKELGDLPGLNYLDLSGNRFSGGIPIELQNLKLNLLNLSNNLLSGEIPPLYANENYRKSFFGNPGLCRALSGLCPSLDENEGKSRKYVWIFRFVFVLAGIVLIVGVAWFYFKFRDFKKIKKGFHISKWRSFHKLGFSEFEIVKLLIEDNVIGSGASGKVYKVVLSNAEVVAVKKLWGATNVGSGFVDSENDGFEVEVETLGKIRHKNIVRLWCCCNSRDSKLLVYEYMPNGSLADLLHSSKKGLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSSNILLDNEFGAKVADFGVAKIFKGANQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPLDPEYGEKDLVKWVCSTLDQKGQDQVIDPTLDIQCREEISKVLSVGLLCTSSLPITRPSMRRVVKMLKEVTQLPKSLSGKLSPYFQEEASDNNHHGSLV 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02691 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Pste3g02691 991 SUPERFAMILY Protein kinase-like (PK-like) 684 959 IPR011009 -
Pste3g02691 991 SUPERFAMILY RNI-like 67 417 - -
Pste3g02691 991 Pfam Leucine Rich Repeat 136 156 IPR001611 GO:0005515
Pste3g02691 991 SMART LRR_typ_2 232 256 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 546 569 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 86 110 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 306 330 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 402 425 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 134 158 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 257 281 IPR003591 -
Pste3g02691 991 SMART LRR_typ_2 498 522 IPR003591 -
Pste3g02691 991 FunFam Receptor-like protein kinase HSL1 308 615 - -
Pste3g02691 991 ProSiteProfiles Leucine-rich repeat profile. 234 256 IPR001611 GO:0005515
Pste3g02691 991 Gene3D Ribonuclease Inhibitor 184 255 IPR032675 -
Pste3g02691 991 FunFam Receptor-like protein kinase HSL1 668 766 - -
Pste3g02691 991 FunFam Leucine-rich receptor-like protein kinase family protein 201 301 - -
Pste3g02691 991 ProSiteProfiles Protein kinase domain profile. 684 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02691 991 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 18 182 - -
Pste3g02691 991 ProSiteProfiles Leucine-rich repeat profile. 113 135 IPR001611 GO:0005515
Pste3g02691 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 228 961 - -
Pste3g02691 991 SMART serkin_6 684 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02691 991 SUPERFAMILY L domain-like 323 605 - -
Pste3g02691 991 PRINTS Leucine-rich repeat signature 232 245 - -
Pste3g02691 991 PRINTS Leucine-rich repeat signature 137 150 - -
Pste3g02691 991 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Pste3g02691 991 Gene3D Ribonuclease Inhibitor 18 178 IPR032675 -
Pste3g02691 991 Gene3D Transferase(Phosphotransferase) domain 1 767 972 - -
Pste3g02691 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 974 - -
Pste3g02691 991 Pfam Protein kinase domain 687 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02691 991 Pfam Leucine rich repeat N-terminal domain 19 58 IPR013210 -
Pste3g02691 991 Gene3D Ribonuclease Inhibitor 256 615 IPR032675 -
Pste3g02691 991 SMART LRR_sd22_2 522 548 - -
Pste3g02691 991 SMART LRR_sd22_2 282 308 - -
Pste3g02691 991 SMART LRR_sd22_2 158 184 - -
Pste3g02691 991 SMART LRR_sd22_2 111 139 - -
Pste3g02691 991 SMART LRR_sd22_2 232 251 - -
Pste3g02691 991 Gene3D Phosphorylase Kinase; domain 1 650 766 - -
Pste3g02691 991 Pfam Leucine rich repeat 78 124 IPR001611 GO:0005515
Pste3g02691 991 Pfam Leucine rich repeat 380 439 IPR001611 GO:0005515
Pste3g02691 991 Pfam Leucine rich repeat 521 559 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02691 Pste-Chr3 19782025 19785546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02691 14 983 Receptor kinase-like Gene Family AT1G28440 60.263 0.0 1131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste3g02691 Pkinase 1.1e-44 CL0016