Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02690 GAGTGATGAGTGGTGAATGGTGAATGGTGAATGGTGATGGACTGGCCTGAGCTCCATATATAGTGGTTAGTTTTATCATCTCCGTCAGTATCCAGTTTTGAATGCACACTAGCGACTAAAGTCAATCATCACTAACACTATAGTATACACTATTCAGTATTCAGTATTCACTATTCACTATTCAGCCGTCCACACTTGTAAATTCTCCCTTGGTTTCCTTCCCTTTTGCCTTTTCCACTGCCACCCGTGCTTCCTTTTTCAACACTCTCCGTTACTCATGGTTACGGCCACCACCATGCCCGTTCTCGATGCCCTCCTCGGAACGCTCTATGTCACATTCTTCTACGCCATTTTGATATGGCTTCTCCTCCACACTTTGAGACGTACCCATCTTCCTGCTTCGTGTTTCCAACCACGACCAATGCTTCTACCTCTACTCATTGCTCTATCATGTGCTGTTGTTTCTGCCGTCAACGTGGCTTTTGCCTTTTACCAATACACCTCTAAGAGAATCATAGGATTTAACGCTGTTTCCTTGCCTCTCACTTGGATTTTGGCTACTATAGTTTCCTTTTTTTCAATGAGGGACAACAACAGGAGGTTCCCTCTTGTTCTCATCCTGTGGTGGTGTTTTACTTGTGTCCTGGATGCGCTCTCCGTCTCACTAAACCTGGTTAAAAATCTGGAATCAATCAACTTGTGGTTTTTCTTGTCAGAGGATAACCTAGTCCATTTGGTTTCGCTGCCTTTATTGCCACTTGTTTGTTTCAATGTGTGTGCAAAGGAGCACTCTGACGAGGAACAACAACAACCCTTGCTTCAGAAACACCTTGAGTCATCCATCCAGGAACAAGATCAAGAGGCCTTTACAAATGCAAGTGTGTGGAGTCAACTTGCATTCCAATGGCTGAACCCCGTTTTTAAAACGGGTAGGATTAAAAAGCTTGAACTTGCTCATATTCCTCCCCTTCCTCCTTCTGAGATGGCACAGAATGCTTCTTCCCTGTTGGAACAATCACTTCGCAAACAGAAACTTAAAGAAGGAGGTTCCTTGGCTAAAGCTATAGCCCATTCTATATGCAAGTCTTTGGCCTTAAATGCAGTTTTAGCTGGGGTTAACACATGTGCCTCCTATATAGGTCCCTTGTTGATAACAAATTTTGTGAATTTTTTATTGGGGAATAATGGTGATTCAAGCATTCAATATGGATTGATTCTGGCATTTATTTTCTTCCTCGCAAAGACCGTCGAATCTCTGAGTCAAAGACAGTGGTACTTTGGAGCTCAACGAATAGGAATCCGGGTGCGTGCAGCTCTTATGTCTCTAATTTTTAGCAAATCCTTATTGATGAAGTGTGCTGGACCAACACAAGGTAAAATCATCAATTTGATCAATGTGGATGTTGAAAGAATCGGGGACTTCTGCTGGTACATTCACGGAGTTTGGTTGCTTCCAGTTCAGATCATTTTGGCCTTGGTAATCCTGTACATAAATCTCGGTTATATCCCTTCTGTTGCTGCATTTGCTGTCACCATTTTGGTCATGGTGTGTAACACACCTTTGGCCAATAAACAAGAAGGTTTGCACTCCAAAATCATGGAAGCTAAGGATTCAAGAATTAAAATGACATCAGAGACCATGAAGAACATAAGAATTTTAAAATTACATTCGTGGGAAATCTCGTTCTTGCAGAAACTCCTCCAACTTAGGGAAACTGAGAGGAGGTGGCTGCAGAAATACCTATATACATGCTCAGCAGTGGCCACTCTATTCTGGACTTCCCCAACTTTAGTTTCTGTTGTCACTTTTGGTGCTTGCATCCTGGTGCAAACAGAATTAACTGCAGCTACGGTCCTCTCAGCTCTGGCAACCTTTCGTATTTTGCAAGAGCCAATCTACAACTTACCTGAGCTAATCTCTATGATAATTCAAACAAAAGTTTCTGTTGATCGAATCCAGGAGTTCATTAACGAAGAGGATCAAAACCAATTCATAAATAGGTATGGTCCAAAAACATCGTCAATTGCTATTGAAATCAAGCCAGGCGAATATGCTTGGGAAACAAATGATCAACCGCTCAAAAAATCAACAATTCAAATTACAGGAAAGTTAGTGATAAGGAAAGGGCAGAAGGTAGCAGTTTGTGGGTCAGTGGGGTCTGGCAAATCAAGCTTGCTCTGTTGTATGCTTGGCGAGATTCCATTAGTTTCTGGGGCAGGGACGAAAGTCTACGGGACTAAAAGTTATGTACCCCAAAGTCCATGGATTCAGTCTGGAACCGTAAGAGATAACATATTGTTTGGCAAGAAAATGAATAAGGACTTTTATGAAGATGTTTTGGATGGCTGTGCTCTGCACCAGGACATTAGCATGTGGGGTGATGGTGATTTGAACCTGGTGGAGGAGAGGGGCATAAACTTAAGTGGTGGACAGAAACAGCGGATTCAATTGGCAAGGGCCGTTTACAGTGATTCAGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTCAAGAATTGTCTTATGAAACTTTTATATGATAAAACGGTTGTTTATGCTACCCATCAACTGGAATTCTTGGAAGGTGCAGACCTCATTTTGGTAATGAAGGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGATCTTATAGCATGTCCCAACTGTGAACTCGTTCAACAAATGGCTGCTCACCAAGAAACAGTGAACCAAATAAATCCATGCCAAGAAGATGATTCTGGTAGCTGTAGACCCTGCCAAAAAAATCAAAGTGAAGTTGCTGAAGAAAATATTCAAGAGATCATGGAAGATTGGAAGAGAAACAAAGAAGAGGAAGCAGAGACGGGTAGAGTGAAATGGAGTGTCTACTCAACTTTTGTCACATCTGCTTATAAAGGAGCACTTGTTCCGGTTATTCTTCTCTGCCAAATTCTCTTTCAAGTTATGCAGATGGGAAGCAATTATTGGATTTCTTGGGCCACAGAGCAGAGGGGCAGAGTTAACAACAAGCAGCTTATGGGAACATTTGTTCTTCTATCTTGTGGTGGCACCATCTTCATACTGGGAAGGACTGTTTTGATGGCAGCTATTGCTGTGGAAACTGCGCAACGCCTTTTTCATGGAATGATCACATCAGTTTTCAGGGCGCCTGTTTCATTTTTTGACACCACACCTTCAAGCAGAATTATGAGTAGGTCATCAACAGATCAAAGTACAGTAGACACTGACATACCCTACAGATTAGCTGGACTAGTATTTGCACTTATCCAGCTATTGAGTATCGTTGTGCTGATGTCCCAAGTAGCCTGGCAAATCATTCTCCTTTTTTTTGTGGTGCTTGCTGTTTCTATTTGGTATCAGGCTTACTACATCACAACAGCCAGGGAATTGGCTAGGATGGTTGGGATTCGAAAGGCGCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGGGCCCCTACAATCCGCTGTTTCAATCAGGAGAAACTCTTTTTGATTAAGGTGAAGGCTCTGATTGATGATTATTCTCGGGTAGCATTTTACAATTTTGGTACCATGGAATGGTTGTCTGTTCGAATCAACTTTCTCTTCAATTTGGTCTTCTACTTTGTTCTCGTCATCTTGGTGACACTTCCAAGGTCTACCATTGATCCAAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTCCTTCAGGCTTGGGTGATATGGAATCTTTGCAATGTTGAGAACAAAATGATATCTGTTGAGAGAATATTGCAGTTCTCTAACATAACTAGTGAAGCACCACTAATTATTCAAGATTGCAGGCCTGAACCAGAATGGCCAAAGGAGGGAAAAATTGAACTGCATAACCTTCACATACAGTATGATCCTACTGCTCCTATGGTCCTCAAAGGTGTCACTTGTGTCTTCCCCGGACAAAAGAAAATTGGTATAGTAGGCAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCTCTCTTCCGAGTTGTGGAGCCTTTGGAAGGATGTATACTTATTGATGGTGTAGATATTTCCAAGATCGGTCTACATGATTTAAGATCTAAGCTGGGTATAATTCCTCAGGATCCAACCTTATTTCTAGGTACTGTAAGAACTAACTTGGATCCTCTGGAACAACACGCAGATCAAGAACTTTGGGAGGTTCTCAGTAAGTGCCATCTTGCTGAAATAGTAAGGCAGGATCCAAGACTTCTTGATGCACCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGCCTTGCTAGGCTACTATTGAAGAAAAGAAAAATTTTGGTCCTAGATGAGGCAACTGCATCCATTGACACTGCCACTGACAATTTAATTCAAAAGACAATTAGAGAAGAGACAAGTGGATGTACAGTCATTACAGTGGCACATAGAATTCCTACAGTTATTGATAATGATCGGGTTTTGGTCCTTGATGAAGGGACAATTGTAGAGTATGACGAACCGGCTCAATTGCTGCAGAACAATTCTTCTTCGTTCTCAAAGTTAGTCTCAGAATTTTTGAGGAGATCATCGCAAAGTAACTTCCAGAAAAGATAAAGAATGAGGAGAGGAAGAAGTTATTTTCAAGAGGATAGTATAGCAGTGACAGACCAAGATACTGTACATAGAGAAACGTTGAGCTTAATGCTAGGCAGAATTTGTTACCAAATCAGCTTGTAAAGAAAAATTTGTAATTTATTATATATTTTTTGTTTTAGTCATATAATTAATTAATGTTAAATTTTTAACACATTTTTCTTGTGCCGAGAATAAGACATTTTTTTTATAATAAAG 4864 0.4112 MVTATTMPVLDALLGTLYVTFFYAILIWLLLHTLRRTHLPASCFQPRPMLLPLLIALSCAVVSAVNVAFAFYQYTSKRIIGFNAVSLPLTWILATIVSFFSMRDNNRRFPLVLILWWCFTCVLDALSVSLNLVKNLESINLWFFLSEDNLVHLVSLPLLPLVCFNVCAKEHSDEEQQQPLLQKHLESSIQEQDQEAFTNASVWSQLAFQWLNPVFKTGRIKKLELAHIPPLPPSEMAQNASSLLEQSLRKQKLKEGGSLAKAIAHSICKSLALNAVLAGVNTCASYIGPLLITNFVNFLLGNNGDSSIQYGLILAFIFFLAKTVESLSQRQWYFGAQRIGIRVRAALMSLIFSKSLLMKCAGPTQGKIINLINVDVERIGDFCWYIHGVWLLPVQIILALVILYINLGYIPSVAAFAVTILVMVCNTPLANKQEGLHSKIMEAKDSRIKMTSETMKNIRILKLHSWEISFLQKLLQLRETERRWLQKYLYTCSAVATLFWTSPTLVSVVTFGACILVQTELTAATVLSALATFRILQEPIYNLPELISMIIQTKVSVDRIQEFINEEDQNQFINRYGPKTSSIAIEIKPGEYAWETNDQPLKKSTIQITGKLVIRKGQKVAVCGSVGSGKSSLLCCMLGEIPLVSGAGTKVYGTKSYVPQSPWIQSGTVRDNILFGKKMNKDFYEDVLDGCALHQDISMWGDGDLNLVEERGINLSGGQKQRIQLARAVYSDSDIYFLDDPFSAVDAHTGTHLFKNCLMKLLYDKTVVYATHQLEFLEGADLILVMKDGKIVESGRYKDLIACPNCELVQQMAAHQETVNQINPCQEDDSGSCRPCQKNQSEVAEENIQEIMEDWKRNKEEEAETGRVKWSVYSTFVTSAYKGALVPVILLCQILFQVMQMGSNYWISWATEQRGRVNNKQLMGTFVLLSCGGTIFILGRTVLMAAIAVETAQRLFHGMITSVFRAPVSFFDTTPSSRIMSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIVVLMSQVAWQIILLFFVVLAVSIWYQAYYITTARELARMVGIRKAPILHHFSESIAGAPTIRCFNQEKLFLIKVKALIDDYSRVAFYNFGTMEWLSVRINFLFNLVFYFVLVILVTLPRSTIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNITSEAPLIIQDCRPEPEWPKEGKIELHNLHIQYDPTAPMVLKGVTCVFPGQKKIGIVGRTGSGKSTLVQALFRVVEPLEGCILIDGVDISKIGLHDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHADQELWEVLSKCHLAEIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREETSGCTVITVAHRIPTVIDNDRVLVLDEGTIVEYDEPAQLLQNNSSSFSKLVSEFLRRSSQSNFQKR 1449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02690 1449 FunFam Multidrug resistance-associated protein 4 572 830 - -
Pste3g02690 1449 CDD ABC_6TM_ABCC_D1 273 560 IPR044746 GO:0140359
Pste3g02690 1449 ProSitePatterns ABC transporters family signature. 715 729 IPR017871 GO:0005524|GO:0016887
Pste3g02690 1449 Gene3D ABC transporter type 1, transmembrane domain 850 1182 IPR036640 GO:0005524|GO:0016020
Pste3g02690 1449 Gene3D ABC transporter type 1, transmembrane domain 250 566 IPR036640 GO:0005524|GO:0016020
Pste3g02690 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 803 IPR027417 -
Pste3g02690 1449 Pfam ABC transporter 1218 1366 IPR003439 GO:0005524
Pste3g02690 1449 SUPERFAMILY ABC transporter transmembrane region 888 1177 IPR036640 GO:0005524|GO:0016020
Pste3g02690 1449 CDD ABCC_MRP_domain2 1199 1419 - -
Pste3g02690 1449 SUPERFAMILY ABC transporter transmembrane region 269 568 IPR036640 GO:0005524|GO:0016020
Pste3g02690 1449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1193 1427 IPR027417 -
Pste3g02690 1449 FunFam ABC transporter C family member 5 849 1182 - -
Pste3g02690 1449 FunFam ABC transporter C family member 10 255 568 - -
Pste3g02690 1449 Pfam ABC transporter transmembrane region 273 539 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g02690 1449 Pfam ABC transporter transmembrane region 890 1128 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g02690 1449 Gene3D - 567 830 IPR027417 -
Pste3g02690 1449 Coils Coil 845 865 - -
Pste3g02690 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 587 813 IPR003439 GO:0005524
Pste3g02690 1449 Pfam ABC transporter 612 742 IPR003439 GO:0005524
Pste3g02690 1449 FunFam ABC transporter C family member 3 1184 1436 - -
Pste3g02690 1449 CDD ABC_6TM_ABCC_D2 886 1176 IPR044726 GO:0140359
Pste3g02690 1449 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 888 1164 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g02690 1449 Gene3D - 1184 1437 IPR027417 -
Pste3g02690 1449 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 272 552 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g02690 1449 SMART AAA_5 1227 1418 IPR003593 GO:0016887
Pste3g02690 1449 SMART AAA_5 616 790 IPR003593 GO:0016887
Pste3g02690 1449 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 198 1439 - -
Pste3g02690 1449 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1201 1435 IPR003439 GO:0005524
Pste3g02690 1449 CDD ABCC_MRP_domain1 585 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02690 Pste-Chr3 19779103 19785218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02690 612 841 Calmodulin-binding Proteins AT2G36910 27.869 4.04e-18 89.0