Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02669 ATGATGTGCAGGCATTTAGAGAACAACAAGTTGACTGGTCGATTACCACCTTATCTGGGTAGTTTGCCAAGCTTACAAGCACTGTATGTTGAACTTACTCACGCATGTATTTCTAGACGCACCAGCGGTAAACCAGGTTACTCATTTCTTCGGGGTGGAAACTTAATGGATGAAAGTACCACTTGCTATATTACACTCTCAGAGTTGGAAGAAGCTACTGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCCGTCTACTACGGGAAAATGAGAGATGGAAAAGAAATAGCAGTTAAGAGCATGAGTGAATCATCCTGCAATGGAAACCAGCAATTTGTTAATGAGGTGGCCCTGCTATCCAGAATTCATCACAGAAATTTGGTTCCCTTGATTGGATATTGTGAAGAAGAATGTCAGCACATTCTGGTTTACGAGTATATGCACAATGGCACTTTACGGGATCATATTCATGAGAGTTCCAAGAAGAAGAACTTAGACTGGTTAGCTCGCCTTCGTATTGCGGAAGATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGCAATCCTAGTATCATTCACCGTGACATAAAGACAGCCAATATTCTCCTAGACATCAATATGAGAGCAAAGGTATCAGACTTTGGACTCTCTAGATTAGCTGAAGAAGATTTAACCCATATATCAAGCATTGCACGAGGAACTGTTGGCTACTTGGATCCTGAGTACTATGCAAGTCAGCAATTGACAGAAAAGAGTGATGTGTACAGTTTTGGAGTAGTTCTGTTGGAACTGATATCTGGAAAAAAACCTGTGTCATCTGAAGACTATGGTCCCGAAATGAACATTGTTCATTGGGCAAGATCCTTAACTCGTAAAGGAGATGCAATGAGCATCATTGACCCTTCTCTAGCTGGGAATGCCAAAACTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAGTGTGTAGAACAACATGGTGCCTCGAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGAGCAGAAAATAAGGTAAAATCGTCATCATCATTTTCAGGTAGTAGTAGTTCAAAGCCACATTCTTCCCGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAAAGCCCTGACTCGTCAAGTGCTTGCCTCCCATCAGCAAGATAAATTGAACCTACTTTACATTCCATATTTCTTCTTAGAGTTTACACCTTCCTTCAAGACAATCATGCTCAAATCGGATACCACATCTCTTACATTTCTTGTGGATTTGGTTTTTATATTTCCGTCTTTTCTCATCATTATTATTATACCAACATGTGTATATCAGTGACAATGTGATACGGACACTAACTAACTAGTGACAAGTGGCAACATTCCAAATTTTGAAACCAATAAAATCTTCCAGAGTTTTCTTAACCTGGTTAC 1464 0.3975 MMCRHLENNKLTGRLPPYLGSLPSLQALYVELTHACISRRTSGKPGYSFLRGGNLMDESTTCYITLSELEEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMSESSCNGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESSKKKNLDWLARLRIAEDAAKGLEYLHTGCNPSIIHRDIKTANILLDINMRAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGKKPVSSEDYGPEMNIVHWARSLTRKGDAMSIIDPSLAGNAKTESIWRVVEIAMQCVEQHGASRPRMQEIILAIQDAIKIEKGAENKVKSSSSFSGSSSSKPHSSRKTLLTSFLEIESPDSSSACLPSAR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02669 400 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Pste3g02669 400 Gene3D Phosphorylase Kinase; domain 1 54 149 - -
Pste3g02669 400 Pfam Protein tyrosine and serine/threonine kinase 76 341 IPR001245 GO:0004672|GO:0006468
Pste3g02669 400 SUPERFAMILY Protein kinase-like (PK-like) 59 341 IPR011009 -
Pste3g02669 400 ProSiteProfiles Protein kinase domain profile. 74 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02669 400 MobiDBLite consensus disorder prediction 357 376 - -
Pste3g02669 400 MobiDBLite consensus disorder prediction 356 376 - -
Pste3g02669 400 Gene3D Transferase(Phosphotransferase) domain 1 150 368 - -
Pste3g02669 400 FunFam Leucine-rich repeat receptor-like protein kinase 54 149 - -
Pste3g02669 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Pste3g02669 400 SMART serkin_6 74 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02669 400 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 150 357 - -
Pste3g02669 400 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 352 - -
Pste3g02669 400 CDD STKc_IRAK 80 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02669 Pste-Chr3 19604742 19607891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02669 40 400 Receptor kinase-like Gene Family AT1G67720 72.652 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste3g02669 PK_Tyr_Ser-Thr 1.4e-51 CL0016