Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02668 CTTCCTCTCACCCACCACCAAAATAACAACCTTTTCTATTCCACAACTTCATCCTCAATAACAAATTCCCAAGGAACATGGAAATGATGGCATACCAGTTTTCCCGGTTACCTTACTCCGATTCCCTCAAACTGCTAGAGGCTGATATACACCATGCAAATGCTTTGGCTGCTGCGATTCCCAGAGCCAAGGGTGGGACTCTTCTCCAAATGAAATTGGTACAAAATGATGGTAGGTCTAAAACGACTTCTCATGGAAGGAAAGCAACCATCCGGGAATTTTATGCCGTTATACTGCCATCTCTTCAGCGGCTTAATGGTAGTTTGGAGAAGTTAGACATTTGTAAGAAAGCGCATTCTAGCATAGATGGTTCAAGTTTTGGCAAGAAAATGATTGAAGGTGATGGGAAACTAATCAATGTTGATTTGGAAAGAGAAGATGAATGTGGGATATGCTTAGAGCCTTGCACCAAAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACACACGGTCTGAGTCTTGCCCTTTTTGCCGTGGTAGCTTAAGGAGAGTTAATTCTGAGGATCTATGGGTACTCACTTGCAATGAAGATGTTGTTGATGCTGAAACAGTTTCCAAGGAAGACTTGTTGCGTTTCTACCTTTATATCAATAGCCTACCTAAAGATCACCCTGATGCACTTTTCTTAATGTATTATGAATACCTGATTTGATATATATATATATATGTTTACTAAATAAGGATAAAAAATGTACAGATAGGGAATTCCGGACTGCAATTGTGAATAGAGTCTGGTAAGAAATATTTCTGATCATGTAAGGCACAACCCTGCCAAGATAAATTTATGTTATTCTATCCCAGTTGTTATATATGTTCATTGTAG 908 0.3932 MEMMAYQFSRLPYSDSLKLLEADIHHANALAAAIPRAKGGTLLQMKLVQNDGRSKTTSHGRKATIREFYAVILPSLQRLNGSLEKLDICKKAHSSIDGSSFGKKMIEGDGKLINVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFYLYINSLPKDHPDALFLMYYEYLI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02668 219 Pfam Ring finger domain 121 161 IPR001841 -
Pste3g02668 219 ProSiteProfiles Zinc finger RING-type profile. 123 161 IPR001841 -
Pste3g02668 219 SMART ring_2 123 160 IPR001841 -
Pste3g02668 219 PANTHER RING FINGER PROTEIN 41, 151 53 217 - -
Pste3g02668 219 SUPERFAMILY RING/U-box 114 165 - -
Pste3g02668 219 ProSitePatterns Zinc finger RING-type signature. 138 147 IPR017907 -
Pste3g02668 219 FunFam RING/U-box superfamily protein 105 170 - -
Pste3g02668 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 172 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02668 Pste-Chr3 19584171 19586263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02668 42 199 C3H Transcription Factor Family AT2G20030 27.879 6.53e-06 44.3