Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02656 GTTTCTTTCTCTCCCTAGAGACTAGAAAAGATAAATCATCTGACACAGGAACACAATCTCTTTGTTTCTCCTCCTTAAAAAAACCCAAAAACAATGGTGGTTCTGTCTTCATTCGCTCAAGCATAGAAAGAGAAAAGCAACAGTAGTAGCACGACCAAAGTCACCGCCGAAACTGCGACCCATTTTCCATTAACATAGAAAAACAAAACCCGACCCGTTTTCCTTATATTTGTATATTTTAATCTCTAAAAGGAGGTGTGTAACACACTGTTTTCTTGTCCCCTCCGTGAAAAAGGAGAGCCAGTACCTACGTCTACGTTTGTAACCGTGGTCGTTTTCCGTTGCAACGTTTGCATCAGTTTTTTCTGCTGTGGAGTGAGTGCTTGTGCTGATTCCCAAGTCCATTTTGGGCTTTTTTTCCCGACTTTGGCTGAGATCCAGTACCCTTTGGGATTTGTAGCTCCTTTTGCTGAGATCTGTTGCTTGTTTGCTGGTGAAATATATTAAAAAGGGGAAAGGATACTGGTGCTGTTACTTGCTATTGGTGGTTCAAGCGTTGTTATATGATGAAGTGTTTGGTTCAAGATTCCAACTTGGGGTGCTGGGGGTTGGAAGCGAATGAAGGGTAGGAGTAGAACAATCGTGTTTTCTAGTGAAACTGGTATTGGTTGAGGATTGAAGAGGTGGGAATTTTCTGAGTTTCATAGCATTTCTAGTTTATGGTTGAGGGAATTTGGTATATTATCTGGGGTCTTTGAGTTTTGTTTAGATTCAACCGGGTTTTGGTTGGTGTAGGGGGATAAAGGTTAAAGAAAAATGATACTGTGGAGTAGGAAGGAAGAGAAGAAAGGGATTCATGTTCGGTTTGGGCTGAAGCTTGTGGGAATTTTGTTGCTGCTAACTTGGTCTAATTAAGAGTGTGCTTGGATAATTGTTTTTTGGGGCTGGGTTTTCGGTTTGAAATTGCTGAAACTTCACTGAAATGAAACTTTCTTCAGCCGGTTTTAGTCCTCCACCCCAGGAAGGAGAAAAGCGAGTTTTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGCCGCGTGGTCTACTTTCCACAAGGTCACAGTGAACAGGTGAGTTATATTATAGCTCCCATAGAGAAACCCTTGAAGGAACTATGTGGATTTTCTTTTACTCTGGTTGCTGTGTCTACCAACAGGGAAGTGGATGGCCATATACCCAACTATCCAAGCTTACCACCGCAGCTTATTTGTCAACTTCATAATGTGACTATGCATGCAGATACGGAGACAGATGAAGTATATGCTCAGATGACCTTACAACCTCTGAGTCCTCAAGAGCAAAAGGAGGCATACCTTCCAGCAGAGTTGGGCACTCCAAGTAAACAGCCAACAAACTACTTTTGCAAAATTTTGACAGCCAGTGACACTAGCACTCATGGGGGATTCTCTGTTCCTCGCAGGGCAGCTGAAAAAGTTTTCCCTCCATTGGACTTTTCACAACAGCCTCCTGCTCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAGTGGAAATTCAGACATATATTCCGAGGCCAGCCCAAAAGGCATCTACTTACAACAGGATGGAGTGTCTTTGTCAGTGCTAAAAGACTTGTTGCCGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGAACCAATTGCTTCTTGGCATTCGGCGTGCTAATCGACCTCAACCTGTGATGCCTTCATCAGTGTTGTCAAGTGATAGTATGCACTTGGGGCTCCTTGCAGCTGCAGCTCATGCTGCTGCAACTAATAGTCGTTTCACCATCTTTTATAACCCGCGAGCTAGCCCATCAGAATTTGTCATACCTCTAGCGAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGAATGCTGTTTGAAACAGAGGAATCTAGTGTTCGTCGATACATGGGCACAATAACTGGAATTAGTGACTTGGATTCCGTAAGATGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAGTCCACAGCAGGAGAGAGGCAACCTAGAGTCTCTTTATGGGAAATTGAGCCATTAACAACATTTCCAATGTATCCATCTCCATTCCCCCTTAGGCTCAAGAGACCATGGCCTCCGGGACTGCCTTCATTCCATGGCTTGAAGGATGATGATTTTGGTATGAATTCTTCACTAATGTGGCTTCGAGACACTGACAGAGGTCTTCCGTCTCTTAGTTTTCAGGGAATTGGTGTTAGTCCTTGGATGCAGCCAAGGCTAGATCCCTCGATGATGAATTATCAAACAGATATGTATCAAGCTATGGCTGCTGCAGCACTTCAGGATATGTGGACTTCAGATCCTTCCAAACAGCATCCTACTTCCTTAATTCAATTTCAGCAACCGCAGAACTTCTCCAACAGGACTTCTCCCTTAATGCAAACTCAAATGCTGCAGCAACCTCAGCCTCAGCAGGCTTTTCCAAATAGTCAAGAAAATTCACATCCATCTCAATCTCAGGCTCTGAGTCAAACACATTTTCAGCAGCATCTACAGCATCAGCATTCATTTAATAATCAGAGTCAGCAGCAGCATCTTCTGCAGCAGCAACAACCACAACAACAACAACCACCACAACTGCAACAACAAGTGGTTGATCAGCAGCAGATTTCAAGTGCTGTCTCTACAATGTCTCAGTTTGCTTCAACATCTCAATCTCAATCACCACCCATACAAGCTATCTCTTCACTGGGCCATCAGCAGAGTTTTTCTGACTCAAATGGGAACCCTGTGACTACTGCCGTTGTTTCTCCTCTGCATAGTATATTGGGTTCATTTCCCCAGGATGAAACGTCTCACCTTCTCAACCTTCCTAGAACGTCTTGGGTTCCTGTTCAACCTTCAACTGCATGGCCGCCTGCCAAGCGTGTTGCAGTGGATCCTCTCCTCTCGTCTGGAGCTTCTCAATGTGTTCTGCCTCAAGTGGAGCAGTTAGGGCAGCCACAGAGTACCATGGCTCAAAATGCTATTACATTGCCACCCTTTCCTGGTAGGGAGTGTGCAATAGAAGGAAGTACTGATCCACAAAATCATCTTCTATTTGGTGTCAATATAGAACACTCATCACTTCTAATGCATAATGGGATATCAGGTCTTAAGGGAGTCAGTAGCAATAGTGACTCACCAACCATACCTTTTCAATCTCATAATTACTTGAACACCACAGGCACTGATTCTTCACTGAATCCTGGAATGACACAGAGTATTGGTGAATCGGGCTTCCTGCAAACTCCAGAAAATGGAGGGCAAGGAAATCCACTGAACAAAACCTTTGTGAAGGTTTACAAGTCAGGGTCCTTGGGAAGATCATTGGATATCACTAAATTCACCAGCTATTGCGAGCTTCGCAGTGAGCTTGCTCGTATGTTTGGCCTTGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCAAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCCTGGCCGGAATTTGTAAATAGCGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTTCTTAACTCGGTCCCTATTCAGAGGCTCTCTAACGATGTCTGTGATGATTATGCAGGCCGTGAGGACCCAAGAAATTTAAGCACGGGGATCACTATTGTGGGGTCTTTAAACTACTGAATGATGTGACAATCAATACTATGAATCTCTTCTCTCACTTGTATTATTAGACCTACTTCTCCACCCTTTGTCAATGGTGGGAAGTACTTCCTAGTTGTAGTTTATAGGCTACTTATAAGCCTTTTGTTTTCCTGTTTTTGCTGCTTAGGACCATCCATAAGCTAAACATGTAACTATATGGCATCTTGTCAATGCGCTACCTACAATATATTGATTACTTAATCTGTTGGGAGCTCAATGCCTGAAGATAACTCTTACCCCATCTATCTTCAATTACATTTTTAAAACCTTGGCTAGATCATTGGAGGCATTTATTTGACCAAGAATATACTTGAGAATTGAAAGTAGTATCGGAC 4131 0.4362 MKLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVSYIIAPIEKPLKELCGFSFTLVAVSTNREVDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLSPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGMNSSLMWLRDTDRGLPSLSFQGIGVSPWMQPRLDPSMMNYQTDMYQAMAAAALQDMWTSDPSKQHPTSLIQFQQPQNFSNRTSPLMQTQMLQQPQPQQAFPNSQENSHPSQSQALSQTHFQQHLQHQHSFNNQSQQQHLLQQQQPQQQQPPQLQQQVVDQQQISSAVSTMSQFASTSQSQSPPIQAISSLGHQQSFSDSNGNPVTTAVVSPLHSILGSFPQDETSHLLNLPRTSWVPVQPSTAWPPAKRVAVDPLLSSGASQCVLPQVEQLGQPQSTMAQNAITLPPFPGRECAIEGSTDPQNHLLFGVNIEHSSLLMHNGISGLKGVSSNSDSPTIPFQSHNYLNTTGTDSSLNPGMTQSIGESGFLQTPENGGQGNPLNKTFVKVYKSGSLGRSLDITKFTSYCELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVGCIKILSPQEVQQMGNNGLELLNSVPIQRLSNDVCDDYAGREDPRNLSTGITIVGSLNY 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02656 930 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 886 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste3g02656 930 Pfam AUX/IAA family 794 882 IPR033389 -
Pste3g02656 930 SUPERFAMILY DNA-binding pseudobarrel domain 134 278 IPR015300 -
Pste3g02656 930 Gene3D - 147 250 IPR015300 -
Pste3g02656 930 MobiDBLite consensus disorder prediction 588 617 - -
Pste3g02656 930 CDD B3_DNA 148 249 IPR003340 GO:0003677
Pste3g02656 930 ProSiteProfiles PB1 domain profile. 797 881 IPR000270 GO:0005515
Pste3g02656 930 FunFam Auxin response factor 313 385 - -
Pste3g02656 930 FunFam Auxin response factor 147 251 - -
Pste3g02656 930 SMART B3_2 149 251 IPR003340 GO:0003677
Pste3g02656 930 MobiDBLite consensus disorder prediction 505 575 - -
Pste3g02656 930 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pste3g02656 930 Pfam B3 DNA binding domain 149 250 IPR003340 GO:0003677
Pste3g02656 930 Gene3D - 313 385 - -
Pste3g02656 930 Gene3D - 794 886 - -
Pste3g02656 930 FunFam Auxin response factor 793 886 - -
Pste3g02656 930 ProSiteProfiles B3 DNA-binding domain profile. 149 251 IPR003340 GO:0003677
Pste3g02656 930 SUPERFAMILY CAD & PB1 domains 797 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02656 Pste-Chr3 19452782 19460080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02656 1 505 B3 DNA Binding Superfamily AT1G30330 81.765 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pste3g02656 AUX_IAA 3.8e-06 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02656 3 19452782 19460080 Pste3g02656 3 19452782 19460080 ECH