Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02651 CAAAGCCAAAGCTTCACCTTCACTTTCCAAGCTTCTGTTTAAAGCTATACTATTACTACTCTTCTTCCTTGTCTTTATTCCCTCTTTGTCATGGAAATGGAAGCTTTTGCCCCACATAAGATTAGTGCCGCTTTCCAACTGACTTCTGGTGTAATTGGAAGCGGGTATGCTTCATCTTCGTCTCTAGTGTTGGATAAGGAGAAGGGAGAGCTTGTAGAGGCCCCTGTCAAATTGGAACGCAAGGGTGTGTCCCCTGAGAGAAGCATTGAAGCCTTGAAGAACCATAGTGAGGCAGAGCGGCGGAGGAGAGCAAGAATTAATTCACATCTTGATACTCTTCGCTCTGTCATTCCAGATGCTAACAAGTTGGACAAGGCAACCTTGCTGGGTGAGGTTATTAGACATTTGAAAGAGCTGAAAACAAATGCAGCACAAGCTAGTGAGGGCCTATTAATACCAAAGGATAATGATGAAATTAGAGTTGAAGAACAGGAAGGTGGATTGAATGGTTTCCCTTACTCAATTAGAGCATCACTATGTTGTGAATACAAACCCGGGTTATTGACTGATATAAGACAAGCACTTGATGCACTTCATCTTATGATAATAAGAGCTGAGATTGCAACCTTGGGAGGAAGGATGAAGAATGTGTTTGTGATGATTAGCTGCAAAGAAAGAAATGTTGAAGATGCTGAGTACCGCCAGTTTCTGGCAGGGTCTGTTCATCAAGCTTTAAGATCTGTGTTAGATAGATTTTCTGTTTCGGAGGACATGTCAGAAAGCAGGAAGAGAAGGAGGATTTCTATATTTAGTTCTTCATCTATAGGAGATTTCTTATGAGAACTTTTCTTTTTAAATATGTAATTTAAATCTCCATATGCAAAGCATATATGATATATCTGAATATGATGAGGAAGTGAATGACATTAGCA 932 0.4013 MEMEAFAPHKISAAFQLTSGVIGSGYASSSSLVLDKEKGELVEAPVKLERKGVSPERSIEALKNHSEAERRRRARINSHLDTLRSVIPDANKLDKATLLGEVIRHLKELKTNAAQASEGLLIPKDNDEIRVEEQEGGLNGFPYSIRASLCCEYKPGLLTDIRQALDALHLMIIRAEIATLGGRMKNVFVMISCKERNVEDAEYRQFLAGSVHQALRSVLDRFSVSEDMSESRKRRRISIFSSSSIGDFL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02651 249 SMART finulus 66 115 IPR011598 GO:0046983
Pste3g02651 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 60 109 IPR011598 GO:0046983
Pste3g02651 249 PANTHER TRANSCRIPTION FACTOR BHLH30 26 241 IPR045847 GO:0003700|GO:0006355
Pste3g02651 249 Pfam Helix-loop-helix DNA-binding domain 64 109 IPR011598 GO:0046983
Pste3g02651 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 53 112 IPR036638 GO:0046983
Pste3g02651 249 Gene3D - 56 118 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02651 Pste-Chr3 19426718 19428888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02651 47 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 42.157 1.62e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste3g02651 HLH 8e-13 No_clan