Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02632 ATGGACTCCGTCACCGGAGCTCCTCCTCCTGCCGGCACCCCTCTTCCTTCGCGTCCATCGCCGTTCCCCGGCCGGGAAGACTGCTGGTCGGAGGAAGCCACGTTCACGCTCATCGAGGCGTGGGGCGACCGCCACCTCGAACTTAACCGCGGCAACCTCCGGCAGCGCCACTGGCAGGAGGTCGCCGACGCCGTTAACGCCCGCCACGGCCACGTCAGCGCCAAAGCCCGCCGCACCGACGTCCAGTGCAAGAACCGCATCGACACGCTCAAAAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGATTCCGGTGATTCGGCCACCGCCTGGCCGTTCTTCCGCCGCCTCGATTTCCTCATCGGCGACACTTTCCCGGCTAAACGACCCTCCCCGCCGGCGACCACCGATCGCCGGAGCACTCCGACGGCGAAGTCCCCGGCGTGGGGGCTCATCCCCGTCCGCCCCCGATCCGGCACGCAAAACCGGCCGGCGGCCGTGAAGGCGGCGTCGCCGGAGAGCGTTGCGGATTCGTACTTCCGGCGGAATTTCTCGGTGTTTGCAGCGGCGGCGGCGGCGGCGGCCGAGGCGGACAGCGAAAATTCTAACGGTTCGAAATGGAGCAGTGGAAGTGAGAAGAAGATGATGAAGAAGAAAAGGGGAAGGGATTGGGAATTTGGTTACAGAGAGGTTGCAGAAGCGTTGGAGAGGTTTGGGGAGATTTATGAGAGAGTTGAAGAAGCCAAACAGAGGCAAATGGTGGAGTTGGAGAAACAGAGAATGCAGTTTGCTAAGGATTTGGAAACTCAAAGAATGAAACTCTTCATGGAAACGCAGGTTCACTTGCAAAAAATCAACCACTCCAAACGTTCTTCTGCATCTGGGATTGGAACTTGGGAGAACTGCTTTCTTCCCATGATAGAAGAAAAATCAGTGATGATACAGTTTAGTACTTCAGATTGTAATGATTGGTTTAAAGTTAGTGCTGTGCGCAGCATTGGAAATTTAAAATGA 1014 0.569 MDSVTGAPPPAGTPLPSRPSPFPGREDCWSEEATFTLIEAWGDRHLELNRGNLRQRHWQEVADAVNARHGHVSAKARRTDVQCKNRIDTLKKKYKIEKARVSDSGDSATAWPFFRRLDFLIGDTFPAKRPSPPATTDRRSTPTAKSPAWGLIPVRPRSGTQNRPAAVKAASPESVADSYFRRNFSVFAAAAAAAAEADSENSNGSKWSSGSEKKMMKKKRGRDWEFGYREVAEALERFGEIYERVEEAKQRQMVELEKQRMQFAKDLETQRMKLFMETQVHLQKINHSKRSSASGIGTWENCFLPMIEEKSVMIQFSTSDCNDWFKVSAVRSIGNLK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02632 337 MobiDBLite consensus disorder prediction 1 26 - -
Pste3g02632 337 Pfam Myb/SANT-like DNA-binding domain 26 119 IPR044822 -
Pste3g02632 337 MobiDBLite consensus disorder prediction 125 164 - -
Pste3g02632 337 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 289 IPR044823 -
Pste3g02632 337 MobiDBLite consensus disorder prediction 198 219 - -
Pste3g02632 337 Gene3D - 29 96 - -
Pste3g02632 337 FunFam trihelix transcription factor ASIL2 29 96 - -
Pste3g02632 337 Coils Coil 231 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02632 Pste-Chr3 19256827 19258618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02632 11 172 Trihelix Transcription Factor Family AT3G14180 47.024 2.77e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste3g02632 Myb_DNA-bind_4 7.1e-26 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02632 3 19256827 19258618 Pste3g02632 3 19256827 19258618 ECH