Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02624 CCAAGTATATAGGGTTTCCTTTCATCAACGGATATAGGATCCATGAACTTGAAAGGGTTCAAATAGTACTTCTTGGGCAACACTGGATGTTTTAGATTCGGATCAAGCTCTTCAGCTTTTGATCAGTACTTACACGACTGATTAATTTAGGGGTCTCCATAGAAATTGACCGTGTTGGATCTTGGAGACAAGCTTTGGCTTCCTTTTGAGTTTTGAATCATCTGAGGTTTTGTTTGGTCGCTTTTATCTTGGAAGGGATACTTAAGGCTGTTTAAGCTTCATCATCACCAATGGAATAACCATTTCTATTTGGCTTCAAGTCATGACTTTTCTTGGTTTTGGATCTCATCCTTCTATGGCACTTAAATTTAGAAATAATATAATTTGCTCTCATAATTCTTGTTCTTGTGGTTAATCGTGAAAAAAGGAGTATTTAGAAGAATTAATTACTTCAATATAGAAATGGAAGACAGAATTGTCATATCTGAAGAAGACAAGAGTGAAAGTAGCCAACCCTCATCTCCAATTCTTAGAAAACGTTCGTTTTTCGATTTGAATGAAGATGCTGTGGATGATAGAGATGATAGCACCAGTGACGACCCAATCAGTAACAATGACATAACATCTCAAGAAGGTAATTTGAGTAGCAATAATAACTCTAGTGAAGAAGGGAAAGAGCGTGCAACTACAGTTAGGCAATACGTGAGATCCAAAATGCCTAGACTTCGTTGGACTCCTGATCTCCATTTAGCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGACAAGAAAGAGCAACGCCCAAGTTAGTTCTCCAGTTGATGAATGTAAGAGGACTTAGTATTGCACATATGTATCGAAGTAAAAAGCTTGATGAGTCAGGCCAAGTTTTATCACAGAATAGGGCAATGCAAGGAAGACATAGTATTTTTTATATGTACGGAAGACTCAACGCCCCACGACCGCGACACTTTGGGGTTGACAACAGGACCTATTTGCCATCATCTCTGCTTATGGAACCAACGCCTTATGATGTCAATGCTCATGGATCTTCAAGATTACATCCCACAGGACTTTTCAATAGTCACATGATGATAAGATCAAGTTCAGTGTGGGACAAAGATTTATATAATTATCAGTTTCAACGTAGTTCCTGCTGTCCTAACTTCACTGGCCACACGAAGTTTGATGCTGAGGTTCATGAAGTGAAAAACCGAATGCCAGAATTCATAAATAAGGTTCAAGTATGGAAACAAGGTCGCGTCAAAGATCAATTGATAGAGAGGTTGAATGAGAAGAAAGGGTCCCCCGGTTTCTTGGAGCTAAAACTAAGTGAAGAATCAAGAAATGTTAGAGATCACCAGATGCAGAAAGATTCAGAAAGTGAACAAGAAATTAATACTAGACTCTCTCTTTCCCTGTTCACTTCCTCATCCTCCTCAAATTCATCACAACAAGCACAATGTAGTGAAAAGCATAAAGACAATACCTGTTTTGAGAGTTTTTATTTTCAAAATTATGCACCAAGGAGTCGTTTGGGCTGAGTACTTATTAGGATCTAACCGTGTCAATTAGAACATACAAGTGAGATCTTTTAAGTACTTGTCATAACTCTTAACAAAATCACATATATGCATGCACATGGACCTTTACTCGGC 1656 0.3841 MEDRIVISEEDKSESSQPSSPILRKRSFFDLNEDAVDDRDDSTSDDPISNNDITSQEGNLSSNNNSSEEGKERATTVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSIAHMYRSKKLDESGQVLSQNRAMQGRHSIFYMYGRLNAPRPRHFGVDNRTYLPSSLLMEPTPYDVNAHGSSRLHPTGLFNSHMMIRSSSVWDKDLYNYQFQRSSCCPNFTGHTKFDAEVHEVKNRMPEFINKVQVWKQGRVKDQLIERLNEKKGSPGFLELKLSEESRNVRDHQMQKDSESEQEINTRLSLSLFTSSSSSNSSQQAQCSEKHKDNTCFESFYFQNYAPRSRLG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02624 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 63 288 IPR046955 GO:0003700
Pste3g02624 359 MobiDBLite consensus disorder prediction 47 70 - -
Pste3g02624 359 SUPERFAMILY Homeodomain-like 84 129 IPR009057 -
Pste3g02624 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 129 IPR006447 GO:0003677
Pste3g02624 359 MobiDBLite consensus disorder prediction 1 76 - -
Pste3g02624 359 Gene3D - 85 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02624 Pste-Chr3 19184956 19188853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02624 77 139 G2-like Transcription Factor Family AT2G42660 72.464 1.05e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste3g02624 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02624 3 19184956 19188853 Pste3g02624 3 19184956 19188853 ECH