Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02618 AAAAGAAGCAAGGGAGAGAGAGTGAGTCAGAGTGTGCCTTTGAACTTGGAAGCTCCAAACAGCTTTTTAACCATTATCGTTTCTTCTCTTCTTCTTCATAGTCACTACTATGATTTAACAGTTTCTACAGTTTAGGGTTTTTTCTCTTCTCAAAAAATAGAAATGGCCGAAGATTACGAATACCGGAGGAAGGCGAAGATTGCACTGGTCGCCATCGTGACGCTTGCTTCCCTCGCCGTCTTTGCCTTGCTCGTTGCCTTCGCTTACTACTGCTACATACTCAACAAGGTCTCCAACCGTCGCAAAAACCTCAAAAAAGTTGAAGATGCCAACCTTAATGAGAAAAGTGACTTTGCAAACCTACAAGTTGTTGCTGAGAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTACATTCTGCTACAGGGGGCTTCAGCAAGTCAAATGTCATTGGTCATGGTGGATTTGGACTTGTTTACCGGGGAGTGCTCAATGATGGTAGAAAAGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAATTTAAAGTAGAGGTGGAATTGCTAAGACGGTTGCATTCTCCATATCTGCTGGCATTGCTTGGGTACTGCTCCGATAGTAATCATAAATTGCTGGTGTATGAATTTATGGCAAATGGTGGACTGCAGGAACATCTTTATCCTGTCAGCAATTCTACTGTTACGCCTGTAAAGTTAGATTGGGAAACTAGATTAAGAATAGCACTTGAAGCTGCCAAGGGTTTGGAGTATCTTCATGAGCATGTCAGTCCCCCAGTGATTCACAGAGATTTTAAGAGTAGCAACATCCTCTTGGATAAGAAATTTCATGCTAAGGTTTCTGATTTTGGATTGGCGAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACGCGAGTTTTGGGCACCCAGGGATATGTTGCCCCTGAATATGCACTGACAGGGCATTTAACAACAAAATCGGATGTGTACAGTTATGGTGTTGTACTTTTGGAGCTGCTCACAGGCCGAGTGCCAGTTGATATGAAGAGACCTCCTGGAGAAGGTGTTCTTGTGTCTTGGGCTCTGCCCCTTTTAACTGATAGAGAAAAGGTTGTAAAGATTATGGATCCTTCACTGGAGGGACAATACTCTATGAAAGAGGTTGTCCAGGTCGCTGCAATTGCTGCAATGTGTGTGCAACCGGAGGCAGATTATCGGCCTCTCATGGCAGATGTTGTGCAGTCATTGGTTCCACTTGTGAGGACTCAAAGGTCCCCCTCAAAGGCAGGCAGCTGCTCTAGTTTCCATTCCCCTAACCGGCCCAACATCTAGTTAATGCATGTAACATGTTATCAATATCAATATTTAAATGAAGGATAAATACATGCTCACCAAACTTAGATTTGTATGCTTGGTAGTTACATTTTCTTTGTAATCTTAAACCACATGATGCTTCTAGGAGAGGAAAAAAAACGGTGGGTTAATGTTTACATTGATGAAAGATTAGACCATTTTATATTTTAGTTGGTGATGGAAGGTACTG 1555 0.4264 MAEDYEYRRKAKIALVAIVTLASLAVFALLVAFAYYCYILNKVSNRRKNLKKVEDANLNEKSDFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLRRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSNSTVTPVKLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPSLEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRTQRSPSKAGSCSSFHSPNRPNI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02618 393 FunFam Receptor-like serine/threonine-protein kinase ALE2 166 383 - -
Pste3g02618 393 FunFam Serine/threonine-protein kinase PBS1 56 165 - -
Pste3g02618 393 ProSiteProfiles Protein kinase domain profile. 90 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02618 393 Gene3D Phosphorylase Kinase; domain 1 50 165 - -
Pste3g02618 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Pste3g02618 393 Pfam Protein kinase domain 91 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02618 393 PANTHER OS07G0668900 PROTEIN 60 375 - -
Pste3g02618 393 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Pste3g02618 393 CDD STKc_IRAK 96 369 - -
Pste3g02618 393 Gene3D Transferase(Phosphotransferase) domain 1 166 383 - -
Pste3g02618 393 SUPERFAMILY Protein kinase-like (PK-like) 72 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02618 Pste-Chr3 19124562 19129077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02618 1 391 Receptor kinase-like Gene Family AT3G58690 77.722 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pste3g02618 Pkinase 7.5e-44 CL0016