Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02615 ATGGAGGAGGATGAGATTCAAGCACAGGCGTGTAAGTTCCCAAGAGTTGGAAACGGAAGGAGCAATGATATCGGTGAGGTGAGAAGAAGAGGCAGTGATGGAGAGAGCACAAACAGGTTCCACAGCTGGCACCACTCTTCGAGGATTATAAGGGTGTCTCGAGCATCTGGTGGGAAAGACAGGCACAGCAAGGTGATGACTTCAAAAGGGTTAAGAGACAGAAGGGTTAGGCTTTCTGTGACCACGGCCATTCAGTTCTATGACCTTCAAGATCGCTTGGGGTATGACCAACCCAGCAAAGCGGTGGAGTGGCTTATCAAATCTGCTGCTGATGCCATTGCTGAACTACCATCTTTGAACAACACTTTCCCTGACACCCCTATAAGCAATGAGAAGATGGCCGCAAGTGGTGGTGGTGTTGGGGTAGATGGTGAAAATGAAAATGAAAATGGCAATAACAAGAGCCAGAACATGTCTTTGTCTAAGTCAGCTTGCAGCAGCACTTCTGATACAAGCAAGGGCTCTGGTTTGTCCCTCTCCAGGTCTGACATTCGTGTGAAGGCCAGGGAGAGGGCAAGGGAAAGAACAGCCAAGGAGAAGGAAAAGGAAAAAGAGAAAGAGAACCACGAGTCTCCTCACAATGTTCCTCAGCATCACCACAATGTGAAGCCGGTTTCCCAAACAGCTTCTTTCACCGAGCTTCTCACTGGTGGAATAAGCAATGCAGTTCAAGTTTCAACAACAGCGAGTCCCAGAGGGGGTGATGATTCTAACATGTTCAACAAAACAGGTAGACAGCAATGGTGTTCATCAGCGCCTATGGACTACTTTCTGGGGCCTTCCTCATCTAGAACAAACCACCATCATCAATATTCTTCTTCTAATGGGTTCTCATTGGCACAAATCCAAGTGGGGCATTCCCTTCCTGAGGCCATGAATCAAGTCTCAGCATCAGCATTCAACAATGTGAGTGGTACTGAGAACCACAACAACCACTCATCAGATCCTCAGCTGCAGCAGCACTTTTCATTCATTCCGGATCATCTGATGTCAGCTGTGGTAACTTCTGCTGCTGCTGCTTCGCATCATCACCCCAGCGGGAACGAGTACAATCTGAACTTCACCATGTCTTCGGGCCTCGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTCTGTTGCCTCACCTGCAGAGGTATTCGCCTATAGATGGATCCACTGTGCCCTTCTTCATTGGAGCTGCTCCTACTGCCGTGGAGAACAACAACCATCATTTATCTTCTGTATTTGATGGCAGCCGCTTGCAACTTTACTATGCAGATGGATGCCGCCATTCTGACCAGAAGGGGAAGGCCAAGAACTGA 1371 0.4858 MEEDEIQAQACKFPRVGNGRSNDIGEVRRRGSDGESTNRFHSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAIAELPSLNNTFPDTPISNEKMAASGGGVGVDGENENENGNNKSQNMSLSKSACSSTSDTSKGSGLSLSRSDIRVKARERARERTAKEKEKEKEKENHESPHNVPQHHHNVKPVSQTASFTELLTGGISNAVQVSTTASPRGGDDSNMFNKTGRQQWCSSAPMDYFLGPSSSRTNHHHQYSSSNGFSLAQIQVGHSLPEAMNQVSASAFNNVSGTENHNNHSSDPQLQQHFSFIPDHLMSAVVTSAAAASHHHPSGNEYNLNFTMSSGLAGYNRGTLQSNSPSLLPHLQRYSPIDGSTVPFFIGAAPTAVENNNHHLSSVFDGSRLQLYYADGCRHSDQKGKAKN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02615 456 MobiDBLite consensus disorder prediction 22 40 - -
Pste3g02615 456 Coils Coil 186 206 - -
Pste3g02615 456 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Pste3g02615 456 Pfam TCP family transcription factor 57 202 IPR017887 -
Pste3g02615 456 MobiDBLite consensus disorder prediction 183 217 - -
Pste3g02615 456 MobiDBLite consensus disorder prediction 146 179 - -
Pste3g02615 456 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 389 IPR005333 GO:0003700
Pste3g02615 456 MobiDBLite consensus disorder prediction 124 222 - -
Pste3g02615 456 ProSiteProfiles R domain profile. 182 200 IPR017888 -
Pste3g02615 456 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02615 Pste-Chr3 19083372 19084742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02615 35 456 TCP Transcription Factor Family AT4G18390 44.321 4.52e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste3g02615 TCP 5.4e-42 No_clan