Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02614 CTCATATTAAACACCAAACCCAACCCCTTCTTCTCATCTAAACCCAATCCCAACTTCATTTTCCAGAGAACCCCACTCACCTATTCACTAGCGTAGTACCAAATTATACATACACTAGATTTTATTTCACACCAACCTATCATGCATCACCGTAGATTCAGCAAATTAATACATGTGGCTGAACCAGATGAGCCCGAGCCCACCTCAGAAACTGGGCCTGCTTCTCCTTCTTCAGGCGAAGACACCAAAACTGAAGCCCCATCACCCAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGCTGACGTGGATGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCTGATTCATGGGCCTGGAGAAAGTATGGCCAAAAGCCTATCAAAGGCTCCCCTTACCCAAGAATTGGAAGTGCAGGTGGAATTGCGGTCGCCTCCGTGGAAAAACCGGTTGGAGGCGGCTGTGCTAAAATGCGCACCGAAGTTGTCGTGACAGCACACGCGGACTCCGAACCGCGTTGCCTTCACGCCACAATAATTATGGAATATAAAAATCTGGAGCCGGAAAGCCGTCATTATCTATCAATGCAGACAATTGTGGGATACTACAGATGTAGTAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTTGAACGAAGCCGCGTGGACCCCACAAAGCTCATAGTCACCTACGCCTACGAGCACAACCACTCCCTCCCCGTCCCCAAAACCACTTCTGCCGCCGCTTCCGCCTCCACAAGTGACGGCGCAACCTCCTCGCCGACGGAGGACGCCAGCAGGTTCCCACCGGAAGAGCAGGAGATGGTGGTGTTCGCCACGAACTCTGATCTCGAACTCGCCGGCGATGCCGCGGTTCTGCTCAGCCACCACCACCACCACCAATTCGGGTGGTTCTATGACGTGGCGTCCACCGGCGTTCTCGACAGCCCGATCTGCGGCGAGGTGGATGACGTGGCGATGACCATGAGGGAGGAGGACGAGTCGATGTTCGCCGATCTCGGCGAGTTGCCGGAGTGCTCGGCGGTTTTCCGGCGAAGGAATATTCTGGCGGCCAGCGTGATTCCGTGTGGCGGCATCACAGGATAATGCGGCTGGACCCTTTTTCTTTCGTCCCACGTTATTGCGTATTATCTATTAAAAAAATTGAAAAAAGTAAAGAAATAATTAATTTACAATTCATGGATTTTTTTTTCTTGCGTTGTACATTTAAATTAACAATTGATTATAGCATGTTACCATTTCTGCATA 1284 0.5062 MHHRRFSKLIHVAEPDEPEPTSETGPASPSSGEDTKTEAPSPKKRREMKKRVVTIPIADVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRIGSAGGIAVASVEKPVGGGCAKMRTEVVVTAHADSEPRCLHATIIMEYKNLEPESRHYLSMQTIVGYYRCSSSKGCPARKQVERSRVDPTKLIVTYAYEHNHSLPVPKTTSAAASASTSDGATSSPTEDASRFPPEEQEMVVFATNSDLELAGDAAVLLSHHHHHQFGWFYDVASTGVLDSPICGEVDDVAMTMREEDESMFADLGELPECSAVFRRRNILAASVIPCGGITG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02614 326 ProSiteProfiles WRKY domain profile. 73 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 Pfam WRKY DNA -binding domain 157 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 Pfam WRKY DNA -binding domain 74 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 SUPERFAMILY WRKY DNA-binding domain 68 93 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 SUPERFAMILY WRKY DNA-binding domain 159 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 SMART WRKY_cls 72 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 MobiDBLite consensus disorder prediction 198 224 - -
Pste3g02614 326 Gene3D WRKY domain 46 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02614 326 MobiDBLite consensus disorder prediction 1 71 - -
Pste3g02614 326 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 306 IPR044810 GO:0003700
Pste3g02614 326 MobiDBLite consensus disorder prediction 198 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02614 Pste-Chr3 19071811 19074176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02614 3 93 WRKY Transcription Factor Family AT3G58710 64.835 2.87e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g02614 WRKY 2.5e-11 CL0274