Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02608 ATGGATGATAACAGGATACACCATGATCAGATGAAAGTAGATAATTTTGACGTGATTTATAAGAGTGATACCCCACAAAATAATAATGGCAGTGGATCCTCGGCATTTTCTTCTGAACAGTCTGCAGAGGTCAATGCTACATTATGGGACTCTAGTTCATGGGATTCTAATTCCACAGACGTGATTCTGAGCACCGGACTCAACATGCAACGAGCCAGTGACCTTCTTTTTGGGTTCTCAATATATGTTGAGCCATTCAGAACTCAAATCATTGAGCATGCACGTTCTGCTATGGAGGAGTTGTTAAATATAGGCACTTCAGGGCAACCTATATGGCAGCCACAGAAAAGAGATAGATATGAGATTTTAAATGATATTGAATATTTGAAGCTATATGGTCAGGTTGATGCCTCGCTAAGCGAGATTGTTAAGTTAATTGAGGTTGGAGAGCCTCAAAATTTACCAAGCTTTGACACATATCAAACTGAGCGTCCAACACCGAAGGCAACTCCCAAAGTAACTCTACAAACTGAAGCTTCACGAGATATGGCATGTATTAGCATGGCCCCAATTCGCATTGTTGAATTACTTATGGATGTGAATCAGTGGTCAAGTGTATTTTATAACATTGTCTCAAAAGCAAAATTGGTAGGAATTTTGTCAGGAGTGGAGGGAAGCTATGACGAAAAATTGCACGTGATAAGCACAGAACTTCATTTACCTACTGTTACTGTACCTACTAGGGAATGTTATTTTGGAAGGTACAGCAAGCAGTTCTCTCATAACATTTGGGGAATAGTTGATATATCATTGGAAAAATTTCTTACTACTCCAAAGGGTAATTTCTTGAAAAGACCATCAGGATGTTTAATTTCTGGAATGCCTAATGGACACTCGAAGGTTGTATGGGTGGAGCATGTAGAAGCAGACCATAGTCATTTGGACAATTATTTCGGGCCACTAGTCACCTCCACTCTAGCTTTTGGTGCAAGCCGTTGGCTTAATTCCTTAATTCGATACAGTGAATGGTTACAAGCTCTACAAGCAACAACATTTGTTTCTGATGAAGGAGTTGTTATATCCCAAAATGGGAGGACAAATTTCTTGAAACTGGCAGATAGAATGATGAAAACCTTTAGTGCAAATATTAGTGCTACAACAGACAATCAATGGATGACAATAAATACTTTTCCTAGTAATTCAGATGTGAGAGTTATGGTGAAGAATAATTATTTGGAAGATAATGGAACGCCTCCTGGTACATCTTTGGTATTCACTACTTCTGTTTGGCTGGATGTTTCTCCAAATAGATTGTTCAACTTCCTTCGTCACGAGAATTCCAGAACTAAGTGGGATTCACTTTCACATAGACTGAGAATTCGAGAATTCGCGTCCATGCTTAAGGGGGAAAATCCAGCTAACCGTGTTTCCCTAATGCGAGCAAATACCTCAGAGGGCAAGCCTGAAATATTTTATCTGCAAGAGAGTTACACAGACTCAACAGGTTCCTACGTGATATATGCTCCATTAGATAAGCCAGCTCTCATATATATTGAAAAAGGATCAGACCCTGACAAAGTGGTGATCCTACCCTCAGGGTTTAGTATACTTCCTGGAAGGTTACAAGGAGATCATGAAGATAGAGGCAATGGAAGTATTCTAAATGTTGCATTCTATATAATTGAAGATACCACTACCACTATTGATCCATGTATCCCTCCTCAGGTGATCGAAACCATATACAGAGTCATTACACATACTGTTACCTCTATAAGGGACGCAGTGCTGTATCATAATCATCCCAACGATAATGTCCACTGTCTAATGTAG 1830 0.3945 MDDNRIHHDQMKVDNFDVIYKSDTPQNNNGSGSSAFSSEQSAEVNATLWDSSSWDSNSTDVILSTGLNMQRASDLLFGFSIYVEPFRTQIIEHARSAMEELLNIGTSGQPIWQPQKRDRYEILNDIEYLKLYGQVDASLSEIVKLIEVGEPQNLPSFDTYQTERPTPKATPKVTLQTEASRDMACISMAPIRIVELLMDVNQWSSVFYNIVSKAKLVGILSGVEGSYDEKLHVISTELHLPTVTVPTRECYFGRYSKQFSHNIWGIVDISLEKFLTTPKGNFLKRPSGCLISGMPNGHSKVVWVEHVEADHSHLDNYFGPLVTSTLAFGASRWLNSLIRYSEWLQALQATTFVSDEGVVISQNGRTNFLKLADRMMKTFSANISATTDNQWMTINTFPSNSDVRVMVKNNYLEDNGTPPGTSLVFTTSVWLDVSPNRLFNFLRHENSRTKWDSLSHRLRIREFASMLKGENPANRVSLMRANTSEGKPEIFYLQESYTDSTGSYVIYAPLDKPALIYIEKGSDPDKVVILPSGFSILPGRLQGDHEDRGNGSILNVAFYIIEDTTTTIDPCIPPQVIETIYRVITHTVTSIRDAVLYHNHPNDNVHCLM 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02608 609 Pfam START domain 160 338 IPR002913 GO:0008289
Pste3g02608 609 SUPERFAMILY Bet v1-like 88 344 - -
Pste3g02608 609 SMART START_1 135 343 IPR002913 GO:0008289
Pste3g02608 609 ProSiteProfiles START domain profile. 83 346 IPR002913 GO:0008289
Pste3g02608 609 SUPERFAMILY Bet v1-like 365 539 - -
Pste3g02608 609 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 66 595 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02608 Pste-Chr3 19030992 19037998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02608 69 595 Homeobox Transcription Factor Family AT4G04890 40.331 5.15e-118 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02608 3 19030992 19037998 Pste4g01431 4 10677421 10681898 ECH
Pste3g02608 3 19030992 19037998 Pste1g00771 1 2412925 2418027 ECH
Pste3g02608 3 19030992 19037998 Pste3g02608 3 19030992 19037998 ECH