Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02600 ATGAATGGTCCACTGATTTATATACCCAACACTTCCCTCTCTTGTCTTTCTACTTTCCCTCTCCTCGATCCGCCGCCGGGTCTCCGAGCGGCAACCACCTTCAACTTTCTTCCACACACATACACAAAAACAAAAAAGAAGAACATGGAAAATACCTCGTCATTAACCCTAACCACCTATCTGTTCCTTATTTTGTTCAGCTTCCATCTGTGCCAAGGCCAAGAAAAATTGTCCAAGTTGGCAGCAGCAGGTCCCAGAAATACGGAGTTGGAGGAATGCGACGGCGTGTTTCTCACCTACGGCCTTTTGGGGCGGGAGAGAGAGTACCCGCACGTCAAGAACGTCTCCAAGCAGGCCTGGTCTTTTAAGGCCCAGGCCTCCCTCACCAACGTCGGCGACCAGGAGCTCCAGGGCTGGAAGATGTTCATCGGTTTCCAGCACCGCGAGATTCTCGTCTCCGCCGACGGTGCCGTTCTCCTCGACTCCAGTGACTTTCCCGCCGAGGTCGGCAACGGTACCACCATGGTGGGCACCTCCGTCACCGACTTGAAGACCGCCATTGACACCGCCGGTGATCTTAACCAGATGAGTGTCACCATTCACATGACCGGGACCCACTTTGGCTTGGGCGCTGCCGCCACCCCTATGCCTAAAACTATTCATCTTCTCAATGATGGCTTCAAATGTCCTGCCCCAACTCTTCGAGGCACGAGAATGTTCGTATGCTGCAGAAAGGACCCAAAAGTGAAGGCGAAGGAAGCAAAGAAAACCAAGTACCCTCCTCGTCGCTATGGAGACATAACCATAGCATACGACGTGCTTCAAGCGTTCAAGAACAACTACTATGTCCAAGTGACAATTGAAAACAATCACCCATTGGGTCGTCTTGATCATTGGAACCTAACATGGGAATGGCAAAAGGGAGAGTTCATATACTCCATGAAAGGAGCCTATCCTAAAATAAAGGAACTTTCTGAGTGCTTATATGGCGTAGCAGGAAAATTCTACGGAGACATGGATTTCTCACAAGTTGCAACATGTCAGAAGAAGCCAATTCTCTCTGATCTTCCAGCAGAAAGAGCAGAAGACGAGAAGGTTGGGAAACTCCCCTGGTGTTGTAGGAACGGCACTGTTTTGCCTCCAATTATGGACAAGAACAAAGCCAGGTCAATGTTCCAGTTGCAGGTGTTCAAAATGCCACCTGACACTGACAACAGAACTTCCATCACTCCCCCTATAAAGTGGCACGTTGATGGTGTCATTAACCCCAAATACGAATGTGCTGCCCCAGTTAGGGTTGACCCTCAAATTTTCCCTGACCCTAGTGGACTCAAGGCAATTACTACATCTGTGGCAAGTTGGCAAATAGTTTGCAACATAACCAAACCCAAGCCTCAGCAAAACCGTTGCTGTGTCTCATTCTCAGCATTTTACAATGAATCAGCCATCCCTTGCAACACATGTGCATGTGGTTGTGATGACACAAGAAAGTGCAACTCTAACGCTCCTCCAATGCTTCTTCCACCAGATGCTCTTCTTGTGCCTTTTGTTGATAGGACCATTAAGGCACGTGCATGGGCCATGCTCAAACACATGCATGTGCCCACCAGGCTCCCTTGTGCAGATAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCTGATCACAAGGATGGATGGACGGCTAGGATCACGCTTTTCAACTGGGAGGACTACTCCTTTGATGATTGGTTCACTGCTGTTGAGTTGAAGAGGACTTTTGAGGATTTTAAAGATGTTTATTCCTTCAATGCAACAAGAATTCCGGGTCTCAAAACCATTTTCTTGGAAGGCCTTAAGGGTTTGAATTACTTGGCTGGAGAGACCAATGGAACACACCACAGAGACCCAAGAGTGCCAGGGAAACAACAATCTGTGCTTTCTTTCAAGAAGAAGCACATAAAAAACTTCGATGTTACACATGATGGGTTTCCCAGTAAGGTTTTCTTCAATGGAATGGAATGTGCACTTCCTCCACATAGACCTGCCAAAAGTTCAGGGCAAAGATCTTCCATCAACGTCATTGCACTCATTTTCGCTGCGTTTGTGACTTTCATGATGCTCTAA 2106 0.4801 MNGPLIYIPNTSLSCLSTFPLLDPPPGLRAATTFNFLPHTYTKTKKKNMENTSSLTLTTYLFLILFSFHLCQGQEKLSKLAAAGPRNTELEECDGVFLTYGLLGREREYPHVKNVSKQAWSFKAQASLTNVGDQELQGWKMFIGFQHREILVSADGAVLLDSSDFPAEVGNGTTMVGTSVTDLKTAIDTAGDLNQMSVTIHMTGTHFGLGAAATPMPKTIHLLNDGFKCPAPTLRGTRMFVCCRKDPKVKAKEAKKTKYPPRRYGDITIAYDVLQAFKNNYYVQVTIENNHPLGRLDHWNLTWEWQKGEFIYSMKGAYPKIKELSECLYGVAGKFYGDMDFSQVATCQKKPILSDLPAERAEDEKVGKLPWCCRNGTVLPPIMDKNKARSMFQLQVFKMPPDTDNRTSITPPIKWHVDGVINPKYECAAPVRVDPQIFPDPSGLKAITTSVASWQIVCNITKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDDTRKCNSNAPPMLLPPDALLVPFVDRTIKARAWAMLKHMHVPTRLPCADNCPVSINWHVSSDHKDGWTARITLFNWEDYSFDDWFTAVELKRTFEDFKDVYSFNATRIPGLKTIFLEGLKGLNYLAGETNGTHHRDPRVPGKQQSVLSFKKKHIKNFDVTHDGFPSKVFFNGMECALPPHRPAKSSGQRSSINVIALIFAAFVTFMML 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02600 701 PANTHER COBRA-LIKE PROTEIN 7 56 700 - -
Pste3g02600 701 Pfam COBRA-like protein 281 461 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02600 Pste-Chr3 18966534 18969214 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02600 54 701 COBRA Gene Family AT3G20580 57.839 0.0 785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02600 3 18966534 18969214 Pste3g02600 3 18966534 18969214 ECH