Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02596 ATGAGGAATCACGATACACGTTATCTTTACTTTCTCTCTGCCACAGAGAATATAGAAGATGAGGAAAAATTGCAACTTGGAACTTCAACTTTTCCCTCCTTCCCTCTCTGATCTTCGCCCCATGATGGAAGCTGAAGTGAGTGAGAGCCCACAGCAACAGGACCCTCACCTTCAACAACAACAGCAACCGCAACATCCGTTTACCATTTTCTATGATGGCAAGATTTGTGTTTCGGATGTTACAGAGCTTCAGGCCAGATCCATATTAATGCTAGCAAATAAGGAGATAGAGAAAAGAGTAATGACACCAACGGGGTCAGAACCATCTTCACCAATGCAGCAATCTCCTCATAACATGTATAGCCCCAGCACTGGACTTTCCATGAAAAGATCGCTGCAGAGGTTTCTCCAAAAGAGAAAGAACCGGGTCCAAGAAACATCCCCATATCATCACTAGTTAATTAACGTTGTTCAATGATTAAAGAAAATGAAAATGCCTCTTTCCCTAACACAGTTTGTTGATCAAGGGCTTGTAAATTAAGTCAATTATCAAAGTTATACAATTTCTTCGTTAATATATGGTTTTCTTAGTATGTACACTACTTTTTTCGGTTGATGATTCAGATTTCATAATGATAAAAAAGTCCTTTGCTTTATCTATGCCAAAAAATAATACACTTCAATTCGATGAATTTTAAGAAATTTTCTGTCGAATTGATATGTCGCTGGTCCCTATTATTCATAATAGTTATTTTTTTTTAAAACTAATTTG 772 0.3705 MRKNCNLELQLFPPSLSDLRPMMEAEVSESPQQQDPHLQQQQQPQHPFTIFYDGKICVSDVTELQARSILMLANKEIEKRVMTPTGSEPSSPMQQSPHNMYSPSTGLSMKRSLQRFLQKRKNRVQETSPYHH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02596 132 Pfam tify domain 43 74 IPR010399 -
Pste3g02596 132 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 130 IPR040390 -
Pste3g02596 132 MobiDBLite consensus disorder prediction 84 112 - -
Pste3g02596 132 SMART tify_2 41 75 IPR010399 -
Pste3g02596 132 MobiDBLite consensus disorder prediction 25 45 - -
Pste3g02596 132 MobiDBLite consensus disorder prediction 27 45 - -
Pste3g02596 132 Pfam Jas motif 110 130 IPR018467 -
Pste3g02596 132 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Pste3g02596 132 MobiDBLite consensus disorder prediction 80 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02596 Pste-Chr3 18924127 18927352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02596 1 131 Tify Gene Family AT1G30135 44.853 1.05e-27 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pste3g02596 tify 1.1e-11 No_clan