Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02594 GTATTTTTGAGGTTAGGATGCACAACTGTTCAATCAAGTGACAGTGCATGTTTATCCTCTATTTATAGGATGGGAAAAATGCCATGCTGTGAGAAGGTAGGGTTGAAGAAAGGTGCATGGACACCCGAAGAAGATACGAAGCATGGCCATGGAAACTGGCCTCCAAAGAAGGTAATCCAACTTTTATGGTCAATCATAGCATCTCACTTGCCCAATAGAACTGACAATGAGATAAAAAATTATTGGAACACCAGCATCAAGAAAAGGCTTATTAGAATAGGTTCAGATCCCATTAGTGACAAACCAAAAGTCACACAACACAATGGGAGAGTGTTCGACTTGAAGCTGAAGCCAGAGAATCAATGTTGCAATTTGAATCTAGCTCTTTATTTCACCCTTAGCTAA 405 0.4 VFLRLGCTTVQSSDSACLSSIYRMGKMPCCEKVGLKKGAWTPEEDTKHGHGNWPPKKVIQLLWSIIASHLPNRTDNEIKNYWNTSIKKRLIRIGSDPISDKPKVTQHNGRVFDLKLKPENQCCNLNLALYFTLS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02594 134 ProSiteProfiles Myb-like domain profile. 32 86 IPR001005 -
Pste3g02594 134 PANTHER F14D16.11-RELATED 63 103 - -
Pste3g02594 134 Gene3D - 34 92 - -
Pste3g02594 134 SMART sant 36 88 IPR001005 -
Pste3g02594 134 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Pste3g02594 134 SUPERFAMILY Homeodomain-like 27 92 IPR009057 -
Pste3g02594 134 CDD SANT 39 84 IPR001005 -
Pste3g02594 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 90 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02594 Pste-Chr3 18907199 18908079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02594 24 103 MYB Transcription Factor Family AT5G15310 44.186 2.11e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste3g02594 Myb_DNA-binding 3.1e-07 CL0123