Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02577 AGCATTGAACAGAAGAAAAGTCAAGAGGAATTCATCAGCCAACTATTCGATCCAACATCTGGATTATTAACTGAGGATACCGCAGAGGTACTATGGATCACTTGCTGGGAAGATTTTATTCATTTAGAGAAAGAAGTAGGAGATCTTGACTTATGCCTCTCAAAGGAATCATACAGAAACACCAATGAAATTAGTTCAGAAATTGGCTCTATAGCTAAAGAAAACATCCAAAAACTGATGAATGCCTGTTATCCTCAGTTAAAGGAAAATGTTCTTCACTGTTTGAGAAAAAATGATTTTCCATTCAATGTTCTCAAGGGAAAGTATGACTCCAAGACTTTGCATTCCATTTACATGAGATCACTCTCTTCTAGAAGATATTTGGGACAAGTTTTCCCCCAGCAAGTATCAGAAACACCAAACAAGGAAGATGAATCACATACAAAGGATAATCGTAAACTTGAAGAATCTGATAAAAAGGACAAAAAGAAGTCAAAGTCTTCAGGCTCTAACGGTAAAGAAGACAAAGAAGCATCTTCGAGTCCAATTGCTATAATTGTAATAGTGACAATTTTGGCTGCAGCATTGCTCGTTTTATGTTGTTGTCGATTTTGTGGGAGTGGTCGAGTTAGTCAAAATGATGAGAGACCCCTTCTTAGCATGAGCATGAGCGACTACTCAGTTGAGGAGAAAATGGGGTTACAATCATCAAATAGTGCATTATTTGGTGACAAGAACTCAATGAAGGAACCTCAATTTGCTAGTACTGGTACAAGACAATCATTTGAATTAAAACCTCCCCCTGGGAGAGTAGGAAGTGGACTGCTTCCTTTGAAACCTCCTCCTGGAAGGCCTGATCTTCTTCCTCGTGAGCCATGTCCAATTAAGCCTCCTGACGATCCCATTATTCCTCTTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCCTCTCCTTCTCCTCCTCCTCCTCCACCACCCATGACTAGAGGTGCTGGCCCTCCACCACCTCCTCCTCCTGCCAGAGGCCGAGGCCCACCACTACCTCCTGGCAATGGCCCTAGACCTCCACCACCACCACCACCTAGGGGCAAGGGCGCTGGTCCTCGACCTCCACCACCTCCTGGAGCTGGAGGAGGTGGAGGTCCTCCAAGAGCACCTCCCCCATTTGGTTCTAAGAATGCAAGAGCTCAAGAAGAAGCTGGAGCCAATTCTGAAACTGAAGTTTATTCTTCTAATAAAGCTAAGCTAAAGCCCTTTTTCTGGGACAAGGTTCAGGCTAACTCAGATCAAACAATGGTCTGGAATCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAGACGCTTTTTGGCTATACTGCTACGACTAACGATAAAGGCAAAGGTCCACAGAAAAAAGAGGCTTCCCAGGCAGCTGCACCTCAATTTATACAAATCATTGACTCAAAGAAATCACAAAATTTATCTATATTATTAAAAGCATTGAATGTGACAATAGAGGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTGAACACTTTGTTGAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTTTTCGCTGGTAATCTAGCCCAACTTGGGCCTGCAGATAGGTTCCTAAAGGCCCTAGTAGACATTCCATTTGCTTTTAAACGAATGGAGGCACTACTTTACATGGGTACACTTCAAGAAGAACTAACTAGTGCTCGAGAATCTTTTGCAGTTTTAGAGGTTGCTTGTAAGCAGCTAAGAAGCAGTCGATTGTTCCTGAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAATCGTATGAATGATGGAACGTTCCGTGGCGGTGCACAAGCATTCAAACTCGATACACTGTTAAAACTATCTGATGTAAAAGGAGTAGATGGCAAGACCACTCTGCTACACTTCGTTGTTCAAGAGATAATGCGAACTGAGGGCATAAGAGCTGCACGAATGGCAAAAGAGAACCATAGTTTCTCTAGTATAAAAACTGAAGACCTTCTGGAGGACATATCTATTGATTCAGAAGACCAATATCGCGAACTCGGTCTTCAAGTGGTTTCGCGTTTAAGCACTGAGCTTGAGAATGTGAAGAAAGCAGCAGCTATAGATGCTGATGGCTTAATAGGAACAACTTGTAGACTAGGCCATGGTCTCATAAAGACAAGAGACTTTGTAAACAAAGAACTAGGTAACATAGAGAATGATAAAGGTTTTCATGAGACAGTGAAGAGTTTTCTGGAGAAAGCAGAGGTTGATGTCACGGGTTTGCTAGAAAATGAGAAGAAAATCACGGCTCTAGTAAAGAACACTGGTGATTACTTTCATGGGGATTCAGGGAAGGATGAAGGGTTGAGATTATTTGCAATAGTACGTGATTTCTTAGTAATGTTGGACAAGGTATGCAAGGAGATAAAAAGTGCACCACCAAAGAAGCCAGTAGTGAAAAATAATGTGAAGCAAGAAACTTCTAATCCTTCTAATCATACTAGAAGGCCATCTTCCTCCGAAATTCTTCCTCTTCCTCCTGATATTCGTCAGAAAATTTTTCCAGCAGTCACAAATAGAAGGGTGGATGACTTTAGTTCAGATGATGAGAGTCCT 2697 0.426 SIEQKKSQEEFISQLFDPTSGLLTEDTAEVLWITCWEDFIHLEKEVGDLDLCLSKESYRNTNEISSEIGSIAKENIQKLMNACYPQLKENVLHCLRKNDFPFNVLKGKYDSKTLHSIYMRSLSSRRYLGQVFPQQVSETPNKEDESHTKDNRKLEESDKKDKKKSKSSGSNGKEDKEASSSPIAIIVIVTILAAALLVLCCCRFCGSGRVSQNDERPLLSMSMSDYSVEEKMGLQSSNSALFGDKNSMKEPQFASTGTRQSFELKPPPGRVGSGLLPLKPPPGRPDLLPREPCPIKPPDDPIIPLPPLPPPPPPPPPPPPPPPPPPPPPPPASPSPPPPPPPMTRGAGPPPPPPPARGRGPPLPPGNGPRPPPPPPPRGKGAGPRPPPPPGAGGGGGPPRAPPPFGSKNARAQEEAGANSETEVYSSNKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFGYTATTNDKGKGPQKKEASQAAAPQFIQIIDSKKSQNLSILLKALNVTIEEVCDALLEGNELPTEFLNTLLKMAPTSEEELKLRLFAGNLAQLGPADRFLKALVDIPFAFKRMEALLYMGTLQEELTSARESFAVLEVACKQLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIMRTEGIRAARMAKENHSFSSIKTEDLLEDISIDSEDQYRELGLQVVSRLSTELENVKKAAAIDADGLIGTTCRLGHGLIKTRDFVNKELGNIENDKGFHETVKSFLEKAEVDVTGLLENEKKITALVKNTGDYFHGDSGKDEGLRLFAIVRDFLVMLDKVCKEIKSAPPKKPVVKNNVKQETSNPSNHTRRPSSSEILPLPPDIRQKIFPAVTNRRVDDFSSDDESP 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02577 899 Pfam Formin Homology 2 Domain 428 829 IPR015425 -
Pste3g02577 899 MobiDBLite consensus disorder prediction 238 262 - -
Pste3g02577 899 ProSiteProfiles Formin homology-2 (FH2) domain profile. 422 855 IPR015425 -
Pste3g02577 899 MobiDBLite consensus disorder prediction 140 173 - -
Pste3g02577 899 MobiDBLite consensus disorder prediction 273 405 - -
Pste3g02577 899 MobiDBLite consensus disorder prediction 848 866 - -
Pste3g02577 899 SUPERFAMILY Formin homology 2 domain (FH2 domain) 372 837 - -
Pste3g02577 899 MobiDBLite consensus disorder prediction 841 878 - -
Pste3g02577 899 MobiDBLite consensus disorder prediction 133 177 - -
Pste3g02577 899 Gene3D Formin, FH2 domain 428 865 IPR042201 -
Pste3g02577 899 PANTHER FORMIN-RELATED 117 871 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste3g02577 899 SMART it6_source 422 844 IPR015425 -
Pste3g02577 899 MobiDBLite consensus disorder prediction 238 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02577 Pste-Chr3 18707708 18711813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02577 159 890 FH2 protein (formin) Gene Family AT5G54650 51.715 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02577 3 18707708 18711813 Pste3g02577 3 18707708 18711813 ECH
Pste3g02577 3 18707708 18711813 Pste1g03747 1 18335396 18343416 PCT