Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02567 GCCGTTTCTCGTATTATGTCGTCTGTATGTGCACTTATTATTTTTGTTGTTCTAAAACCGTGTCTGCTTCATCAACTCTGTTAGACATAATTATAACACATTCTTTTTCTATGATTTTTGTTATGGGAATCTCGCCTTGGATCCACTTCTGGGTGGCTTCGTTTCACTTTGTGTCTTTAGCAACGCTTAGACGAAACTCCTAACTAAATGCCTTCACCGCTTCAGTTATATCAGCTATTTATTATTTTTATTTCCAGTGTGTAAACGGGTGAGTACACGTTTCATGGTTTTCCCAGAACTTGTTGTTGTTTCCCTTTTAGTCAACCTTGTTTGCTGTCTAGTGATCTGTTATCCTATGTTCCTTCAAAGTGCCTTCTGCTTTTCAATGTAGCTGCTTAGCTGGATATACACGCTTCTTCTTTCTTTTTCTTTTTGTTACTTTTTTTAATTTTTATGTACCCTTTTGTTGGTTGCTAAGAAAAAAAAAAAACTCTGTGGGATGAATGAAATCAAGAGGAAAATAAAATGGTTTTTGCATTTTGTCACACATGTGACTCACATGGTTGTATAAATCTGAGCTGAGATTTCATTTGTAGGTTGGAACTTTTTGCATTGCATCATTCTGATCTTGCTCTTCTTCCCCAGTTTCTTGTCCCTGTGATATTTCAGGTATGTCAATGGATTGGATGATCAATAGCGAATTATAGTACAAAAGAGGAAAAAGGAGAGATGAAAGACGAGTCGATTGGACTTATCATTGGGATTTCCATAGGTGTGGTGATTGGAATTGGTTTGGCAATTTCTGCTTTGTTCTGTCTTAGATATCATCGGAAGCGGTCACAGATTGGCAATAGCAGTTCCCGGAGGGCTGCTACCATACCCATCCGCGAAAATGGAGTTGATTCTAGTACTATTCTATCAGACTCAACCTTGGGTCCAGAATCACCTGTAAGGTCTGGACGAAATGGCATGTCCTTCTGGCTTGATGGCTTCAAGAAGAGTAGTAACATGGTGTCAGCATCTGGAATACCAGAATATTCATACAAGGATTTGCAAAAGGCAACATATAATTTTACAACACTCATAGGACAAGGTGCATTTGGTCCTGTATATAAAGCTCAGATGTCTACCGGAGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCAAACTGAGGTTATGTTGTTGGGAAGGTTACATCATAGAAATCTGGTTAATTTGGTCGGGTATTGTGCAGAAAAAGGGCAGCATATGCTTGTATATGTCTATATGAGTAAAGGCAGCTTGGCTTCCCACTTGTACAGTGAAGAGAATGGAGCGTTGGGCTGGGATTTGAGAGTTCATATAGCTTTAGACGTAGCAAGAGGCATAGAGTATCTTCATGATGGGGCAGTTCCTCCTGTAATCCATCGAGATATTAAATCTTCCAATATTCTCTTGGACCAGTCCATGCGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAAATGGTGGATAAACATGCTGCAATTCGGGGCACCTTTGGCTACCTTGACCCCGAGTATATATCTTCAGGGACATTCACCAAGAAAAGTGATGTATACAGTTTTGGGGTGTTGCTCTTTGAACTAATAGCCGGCCGAAATCCACAGCAAGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAACACGGAGGGAAAAGTTGGGTGGGAAGAGATAGTAGATTCTCGGCTTGAGGGAAAATGTGATTTTGAAGAGCTGAATGAAGTGGCAGCCCTTGCCTACAAATGCATCAACCGTGGCCCAAAGAAACGGCCTTCCATGAGGGACATAGTTCAGGTGTTGACACGGATCCTTAAATCAAGACACCAAAAGAATCATCACCACAAGAATTCCCTCTCAGCTACAGCTGATGAAGTTTCCATTGACGTTGATCAGCTAGAAACCAAGACTTCTATCACTCACCACAGAAGAGAAGAATCTATAGATAGTACTGCTGACATGTATGATGTCTAGAAGATGGTTTTGCATTTAGCTCAGTTTTTTTTTTTTACATTCAATTTTTAGCTTTTGCCCTTTGCTTGTGATGTGGTCATAACTTTGATACGAGGCACAAGTGATTTGATGATGTCCGACATCATCTTCTATAACTGCGTTAACATGATTTTCTGTTGCTGTATTTTTTTCCTCATTTTTTCTCTTACCTAGTACTGTTCTCGAACAAATGACACTACAAAATTTGTATATTAATAGTTCCAAGAAATGAATTTGAAGTGACAAAAGAGA 2295 0.3961 MKDESIGLIIGISIGVVIGIGLAISALFCLRYHRKRSQIGNSSSRRAATIPIRENGVDSSTILSDSTLGPESPVRSGRNGMSFWLDGFKKSSNMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGIEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLEGKCDFEELNEVAALAYKCINRGPKKRPSMRDIVQVLTRILKSRHQKNHHHKNSLSATADEVSIDVDQLETKTSITHHRREESIDSTADMYDV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02567 431 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 188 - -
Pste3g02567 431 MobiDBLite consensus disorder prediction 411 425 - -
Pste3g02567 431 PANTHER OS01G0750732 PROTEIN 5 401 - -
Pste3g02567 431 Coils Coil 390 410 - -
Pste3g02567 431 CDD STKc_IRAK 119 378 - -
Pste3g02567 431 ProSiteProfiles Protein kinase domain profile. 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02567 431 Pfam Protein tyrosine and serine/threonine kinase 115 375 IPR001245 GO:0004672|GO:0006468
Pste3g02567 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Pste3g02567 431 FunFam calcium/calmodulin-regulated receptor-like kinase 1 189 398 - -
Pste3g02567 431 Gene3D Phosphorylase Kinase; domain 1 84 188 - -
Pste3g02567 431 SMART serkin_6 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02567 431 MobiDBLite consensus disorder prediction 411 431 - -
Pste3g02567 431 SUPERFAMILY Protein kinase-like (PK-like) 102 389 IPR011009 -
Pste3g02567 431 Gene3D Transferase(Phosphotransferase) domain 1 189 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02567 Pste-Chr3 18622328 18627328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02567 24 375 Glycoside Hydrolase AT3G07070 39.353 6.31e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pste3g02567 PK_Tyr_Ser-Thr 3.3e-53 CL0016