Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02540 CTCTTAGACTTAAACCTTGTCCTCAAAGAGCACCATGAAGAGAAGTATATATGGAAAAGCTTTTACTACCCTTGTGACACACTTTTACCTGGTATGAAGCCTGGGAAAGACTTAAGAAATGACCTTGATCGATGTCTAACTGCATGGAAGAATGAAAATGACCCTTCACTTAGAACGTGTGATCAAGGTGAGTCACCTGCTTGTGATTGTTTAAAGGGTTTTAAGCCTAAATCTCCTGTGCAGTGGAGTGGAATGAAGTATTCTAAAGGGTGTGTGAGGGATGGAGCATTGGAGTGTAAGAATGATGGATTTTTCAAATATGTAGGGATGAAAAAAGAGAAGCTTGAGGAATTGTTCTTGCACAGCTTACACAAACTCGCATGTAATAGGAGGAGGAAGTGGTTGTGCCATTTAACAAAACCAGATAGTGTTGCAATAGTGGACAGTTGCAAAGAAGAAGAGGAAGATATGGACCTTCCATTAATCATGAAGAAAACAAAGGAATCTCCTGGAACATTGGAGAATGGACAAGAAATTGCTGTGAAGAGACTTTCTAGTCGTTCTGGACAAGGGCTCAAGGAATTTAAAAACGAAATTAAATTAATAGCCAAACTTCAACAATGTAATCTTAAAAAAAAGTTGCTAGTATACGAATACATGACTAATAGAAGCTTGGATTTCTTTATATTTAGTATGAACGTGGAGTTCAAGTTAAAATTGTTGAAAATGAAACACAGAATGCTGTTAGATTGGCCCAAGTGTTTCAATATAATTTGTAGGATTGCAAGGGATCTTCTCTATCTTCATAAGAACTCGAGACTGATAATCATTCATAGAGATCTGAAAGCAACTAACATCTTACTTGACAGTGAGATGAATCCGAAGATCTCTGACTTTTGCTTGGCTAGAATTTGTTATGGAGACCAGAATGCAGCAACTACACATAGGGTGGCTGGAACTTATGGATATATGGCACCAGAGTATGCAATAGATGGGAACTTTTCAGTGAAATCTGACGTCTTTAGCTTTGGCATCTTGTTGCTGGAAACAGTATCGGGAAAGAAAAATGTAGGAAGCAATCAGCTAGATGAAAGTAGAAACCTTATTGGACATGTGAATGCATGGGATTTGTGGTCAGATGGGAGGCCTTTAGAATTGAAATACTGCACAGGTTCTTGCAATCTTTCTGAAGCACTGCGTTGCATCTCTATCAGTCTTCTGTGTCTTCAGCATCATCCACATGACAGGCCAAGCATGTCATCTGTAGTTATGATGTTAGGTAGTGAGATTGGCTTGCCTCAGCCTAAACTACCAGCTGTATTTGTTGGAGAAGGTTCACCGCATGAGGAATATTCTTCATCATATAAGAATGACTCACTTTCTGTCAACGAATTAAGTATTACAGTTTTAGAAGCTCAGAGGGCAGAACCTAAAGAGCGTGGCCTGTTCATACAAGGTTGCTTAAGAGTAATGTATAGTCTCCACGTCCATGACACTGGTGGGACCAGCAACTGCATGGGTGTGAGAATTGGAAACCAAAGAGATCAAAAATCAAATATATCAGTGGCTATAACTGCAGAGGCCAAGTCCTCTTTGTGCAAAGTCCTCCTTTTGCCTTGGATGGCCATGATCCAGGACCTTCTAGTAAGCTCCTCAATGAAGAGCTCACAAGCCTTGGAGAAAATAATGGGGGCCTCCCCTGATATCATTTTAACATCCTCCCCAGACTTCTTCATGATCTTCTTGATCCTTGCCAAAGGCAGTGAGTGGGGCCCGCTCCTTCCTGATACCCCACCACACAGGGTAGAATGGAGACACCCCAAGAGTATTGACCGGACACGGAACCTTATGTCTTTTATGAGAATTATTTTCCTTTGTTATCATATACTTGTCTGTCTTTCTGAAATTTCCTTGGCACTTGACTCCATTTCTCAAGACCTGTCCTTAAGTGATGATGGTGAGAACACCACCTTGGTTTCCAAAGATGGAACCTTTGAACTTGGATTCTTCACCCCAGGAAACTCCCAGAAACGTTACCTGGGGATATGGTACAGGAAAATTCCTGTTCAAACTGTGGTTTGGGTTGCAAACAGGCTAAATCCAATCAATGATTCATCTGGCATCTTAAGAATGAACTCCAGCACTGGGGACCTTGTCCTCACACAGAAAGGCACTGTTCTTTGGTCTACAACCTCTTCTAGAAAACCAGAAAGTCCAGTGGCATTACTGTTAGATTCTGGCAATCTTGTGGTAAGAGATGAGAAAGATGCAAGCGCCGACGCCTACTTGTGGCAGAGCTTTGACTACCCAACTGACACTTTCTTACCAGAAATGAAATTTGGATGGGACTTGAGAACTGGTCTTAATAGACTGTTAACAGCTTGGAAGAGTCCTGATGATCCATCTCCAAGTGACTTCTCTTTTGGTATGGTGCTTAATAACTATCCTGAAGCATATATGATGAAAGGTGATCAAAAGCTCTACCGAAGTGGACCATGGAATGGCTTGCATTCAAGTGGTTCACCACAAGTAAAGGCCAACCCCATATATGACTTCAAGTTTGTTTCCAACAAAGATGAACTTTACTACACATATAGCCTTAAGAACTCCTCTGTGATCTCAAGGTTGGTGCTGAATGCAACAACCTCCGTTCGCAGGCGATATGTGTGGATTGAATCAAAGCAAAGATGGGAAGTCTACACTTCAGTGCCATTGGACTTATGTGACAGTTATTCCCTTTGTGGGGCTAATGCAAATTGTGTTATTTCAGATTCACCAGTGTGCCAATGTTTGGAAGGATTCAAGCCTAAGTCACCTCAAGCATGGAGCTCAATGGATTGGTCTCATGGATGCGTCCGCAATAGGGAATTAAGCTGTGAGAACAAGCACAATGATGGATTTATCAAATTGACTGAACTGAAAACGCCTGACACAACACGTAGTTGGCTGGATCAGACAATTGAGTTAGAGGAATGCAGAGCCAAGTGCTTGGATAACTGTTCTTGTATGGCTTATGCAAATTCGGATATCATTGGGCAAGGAAGTGGTTGTGCTATGTGGTTTGGTGATCTAATTGATATTAGACAGTTTGCAGCTGGAGGCCAGGATGTATATGTTCGAATGGATGCTTCAGAATTCGGTAGGAATTTAGCTTTGCCACTTAATATGGATCACAAGAAAGGGGGAGTTGTAGTGGCAGTAACAGTTTCTTCGGCCGTCGCATTAATTGCTGGAATACTAATGATACTTGGATGGTGTTATAGAAAGAAATCGCATGACAGTGTGAAAGATGTTCGCGTGTTATTTGACAACCATAAAGAGAGTTATCTGCAAAACAAAAATCATAGAAGTATACAGTGTACAGGTTCCACTATTTCTAATTTGGTCAATAACTGCGTCTGCTTGCTGAATGAGAAGTTTCCTAATTCCTTGCATCAACTTGAAGGTACCAGCCCTTCTTATTTCCTTTATTATTTGTTTGCATTTGGGGACAGGGGTGCTTATCACAATCTGAAATCACCAACTTATGCTATGACAGAGAGATCAAACTTGAGTATCAAATCAAACCAAAACAGTGGAATGCAAGTGGATGATATCGACCTACCAGTTTTTGGCTTGTCAACAATAGCAAAGGCCACCGGCAACTTTACAATCAAAAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATACAGGGGAACTCTAGCAGATGGGCTGGAAATTGCTGTAAAGAGGCTTTCCACAAGCTCAGGGCAAGGATTGACCGAATTCAAGAATGAAGTAAAATTGATAGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTAGGGTGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAATACATGCTTAATGGTAGCCTGGACTCATTTATTTTTGATCAGCAAAGAAGTGAGTTATTAGACTGGTCAAAGCGCTTCAACATTATATGTGGAATTGCCAAGGGCATTCTCTATCTTCATCAGGATTCCAGACTCAGGATTATTCACAGAGATCTCAAAGCAAGTAATGTTTTACTTGACAGTGAGTTGAACCCCAAAATTTCAGATTTTGGCATGGCTAAAATTTTTGGTATAGATCAGAATGAAGGAAATACAAGGAGAATAGTTGGGACTTATGGTTACATGGCACCAGAATATGCAACTGATGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGGGTTTTATTAATGGAGATTATATCTGGGAAGAGAAGTAGAGGATATTATAATCAGAACCACAGCCAAAATCTCATAGGCCATGCATGGAAACTTTGGAAAGAAGGAAAACCACTAGAACTGGTTGATAAAAGCATGGGAGACTCCAGTTTTCTATCACAAATATTGCATTGCATTCATGTTAGTCTCTTATGTGTTCAACAGAATCCAGAGGATAGGCCAGGAATGTCTAGTGTGCTTCTTATGTTAGTTAGTGAACTTGAATTGCCTGAGCCAAAACGGCCAGGGTTCTTTGGAAAATATTCAGCTGAAGCAGACTCCTCCACAAGTAAGCAGCAACTATGTACAACAAATGAAATAACCATTACCTTATTAGAAGCCCGTTGA 4599 0.407 LLDLNLVLKEHHEEKYIWKSFYYPCDTLLPGMKPGKDLRNDLDRCLTAWKNENDPSLRTCDQGESPACDCLKGFKPKSPVQWSGMKYSKGCVRDGALECKNDGFFKYVGMKKEKLEELFLHSLHKLACNRRRKWLCHLTKPDSVAIVDSCKEEEEDMDLPLIMKKTKESPGTLENGQEIAVKRLSSRSGQGLKEFKNEIKLIAKLQQCNLKKKLLVYEYMTNRSLDFFIFSMNVEFKLKLLKMKHRMLLDWPKCFNIICRIARDLLYLHKNSRLIIIHRDLKATNILLDSEMNPKISDFCLARICYGDQNAATTHRVAGTYGYMAPEYAIDGNFSVKSDVFSFGILLLETVSGKKNVGSNQLDESRNLIGHVNAWDLWSDGRPLELKYCTGSCNLSEALRCISISLLCLQHHPHDRPSMSSVVMMLGSEIGLPQPKLPAVFVGEGSPHEEYSSSYKNDSLSVNELSITVLEAQRAEPKERGLFIQGCLRVMYSLHVHDTGGTSNCMGVRIGNQRDQKSNISVAITAEAKSSLCKVLLLPWMAMIQDLLVSSSMKSSQALEKIMGASPDIILTSSPDFFMIFLILAKGSEWGPLLPDTPPHRVEWRHPKSIDRTRNLMSFMRIIFLCYHILVCLSEISLALDSISQDLSLSDDGENTTLVSKDGTFELGFFTPGNSQKRYLGIWYRKIPVQTVVWVANRLNPINDSSGILRMNSSTGDLVLTQKGTVLWSTTSSRKPESPVALLLDSGNLVVRDEKDASADAYLWQSFDYPTDTFLPEMKFGWDLRTGLNRLLTAWKSPDDPSPSDFSFGMVLNNYPEAYMMKGDQKLYRSGPWNGLHSSGSPQVKANPIYDFKFVSNKDELYYTYSLKNSSVISRLVLNATTSVRRRYVWIESKQRWEVYTSVPLDLCDSYSLCGANANCVISDSPVCQCLEGFKPKSPQAWSSMDWSHGCVRNRELSCENKHNDGFIKLTELKTPDTTRSWLDQTIELEECRAKCLDNCSCMAYANSDIIGQGSGCAMWFGDLIDIRQFAAGGQDVYVRMDASEFGRNLALPLNMDHKKGGVVVAVTVSSAVALIAGILMILGWCYRKKSHDSVKDVRVLFDNHKESYLQNKNHRSIQCTGSTISNLVNNCVCLLNEKFPNSLHQLEGTSPSYFLYYLFAFGDRGAYHNLKSPTYAMTERSNLSIKSNQNSGMQVDDIDLPVFGLSTIAKATGNFTIKNKIGEGGFGPVYRGTLADGLEIAVKRLSTSSGQGLTEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMLNGSLDSFIFDQQRSELLDWSKRFNIICGIAKGILYLHQDSRLRIIHRDLKASNVLLDSELNPKISDFGMAKIFGIDQNEGNTRRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQNHSQNLIGHAWKLWKEGKPLELVDKSMGDSSFLSQILHCIHVSLLCVQQNPEDRPGMSSVLLMLVSELELPEPKRPGFFGKYSAEADSSTSKQQLCTTNEITITLLEAR 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02540 1532 CDD PAN_AP_plant 957 1040 - -
Pste3g02540 1532 Pfam PAN-like domain 959 1027 IPR003609 -
Pste3g02540 1532 SMART blect_4 649 770 IPR001480 -
Pste3g02540 1532 Pfam Protein tyrosine and serine/threonine kinase 1217 1484 IPR001245 GO:0004672|GO:0006468
Pste3g02540 1532 SUPERFAMILY alpha-D-mannose-specific plant lectins 5 55 IPR036426 -
Pste3g02540 1532 SUPERFAMILY alpha-D-mannose-specific plant lectins 692 801 IPR036426 -
Pste3g02540 1532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1337 1349 IPR008271 GO:0004672|GO:0006468
Pste3g02540 1532 Pfam D-mannose binding lectin 5 50 IPR001480 -
Pste3g02540 1532 Pfam D-mannose binding lectin 691 796 IPR001480 -
Pste3g02540 1532 CDD STKc_IRAK 1222 1487 - -
Pste3g02540 1532 SUPERFAMILY Protein kinase-like (PK-like) 1197 1487 IPR011009 -
Pste3g02540 1532 Pfam Domain of unknown function (DUF3403) 1490 1532 IPR021820 GO:0004674
Pste3g02540 1532 Pfam Domain of unknown function (DUF3403) 432 472 IPR021820 GO:0004674
Pste3g02540 1532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1180 1291 - -
Pste3g02540 1532 Pfam Protein kinase domain 174 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02540 1532 ProSiteProfiles Protein kinase domain profile. 1216 1501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02540 1532 CDD B_lectin 653 770 IPR001480 -
Pste3g02540 1532 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 714 1511 - -
Pste3g02540 1532 Gene3D Phosphorylase Kinase; domain 1 1176 1291 - -
Pste3g02540 1532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 636 767 - -
Pste3g02540 1532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 220 434 - -
Pste3g02540 1532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1292 1495 - -
Pste3g02540 1532 ProSiteProfiles EGF-like domain profile. 904 940 IPR000742 -
Pste3g02540 1532 SUPERFAMILY Protein kinase-like (PK-like) 174 442 IPR011009 -
Pste3g02540 1532 Gene3D - 639 767 IPR036426 -
Pste3g02540 1532 ProSiteProfiles Bulb-type lectin domain profile. 640 764 IPR001480 -
Pste3g02540 1532 Pfam S-locus glycoprotein domain 828 938 IPR000858 GO:0048544
Pste3g02540 1532 Gene3D Phosphorylase Kinase; domain 1 163 221 - -
Pste3g02540 1532 ProSiteProfiles Protein kinase domain profile. 94 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02540 1532 ProSiteProfiles PAN/Apple domain profile. 959 1043 IPR003609 -
Pste3g02540 1532 FunFam Os04g0303100 protein 682 828 - -
Pste3g02540 1532 Gene3D Transferase(Phosphotransferase) domain 1 1292 1495 - -
Pste3g02540 1532 Gene3D Transferase(Phosphotransferase) domain 1 222 431 - -
Pste3g02540 1532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Pste3g02540 1532 SMART ntp_6 962 1041 IPR003609 -
Pste3g02540 1532 SMART serkin_6 1216 1489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02540 Pste-Chr3 18261984 18275507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02540 171 468 Receptor kinase-like Gene Family AT4G11530 49.527 5.01e-78 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02540 PK_Tyr_Ser-Thr 6.7e-50 CL0016