Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02534 CTTGACAATATCACTCATGTTGCATATCTAGCCTTCTTTCATTTCTCATCTTCTCGTGACTCTTCTATGGCTAATTTGCTGAAGAATGACTATGATAATGTTCCAATAACCTTATTCCTTACATCAACATTCTTGTTGTGGATAGCGTCTATTAGTGGCCAAGAAAACGCAGCACAGGTGGAGTGTGACAAGCCATTTAGCTGTGGACAAGTGTCCATCTACTACCCATTCTGGGGAGGGGAAAGACCCAGTTATTGTGCCAGCAACCAACAATTGAAGCTCAACTGCGAGGGTAACCAAAACACCACCATCAAACTTGGCTCACAAAGTTTCCAAGTGCTTCACTTTGCTGATCCAGTGCGTTACACCTTGACAATGGTTCGAACAGGCCTTGTCTATGATAATTGTTCTTCCTCGGCCTTAACCAACACTTCCTTGGACTCAAGTCTATTTAGTTATAACCAAAATGTTACCAACATCACCATCTTCTATGGTTGTCCCAACTCCGTGATTGCAAATAGCACACGATCTTTTCCATGCAAGGAAGGTGGCGACAAGGGTGCTTTCTATGGGGACCCCTCAACTAGAAAAGTCCAAGATTGTGAAGGACCAAGGATTCAAGTGCAAGTAAAACAGAAATATGTGCCTGAAGGTGGAATTCAAGAGTTGAACAAAGCCTTGAGTGAAGGATTTGAAGTGCGTCTTATTTCAGAGGCTCAATTTCAACAGTGCTTAGGATGCGTTTTAACCAACGGCTCTTGTGGGGCAAATGACCAGTCTCAGTTTTCATGCTTTTGCCAGGATGGAACTGAAGGTTTAGATTGTTCTCATCATAGTAATAAATGGAATTGGAAAAGGAAGCTTGGTATAGGTGTTTCTGCTGCTGTGGTAAGTGCAATTGCAGTTAGCATTGGCTTTTATATCTATTATAGCTGTCAAAAGAAGAAAAATCATCTTCATGCAGTATCATCATCTATACTGTCTAAAGGAATCCCTTATAGTTCTTCTTTAGAAGACCCTGAGGGGTGTAATTACTTTGGGGTCCACTTCTTCACCTACAGTGAACTTGAAGAGGCAACAAACTTCTTTGATCCTGCCAGAGAACTAGGAGATGGAGGATTTGGAAAAGTGTATTTTGGCAAACTTCAGGACGGGCGTTTGGTAGCAGTGAAAAGAATGTATGAGAACAGTTGCAGAAGAGTTGAGCAATTCGTGAATGAAGTAGAGATCTTAACAGGCTTACACCACCAAAATCTTGTGTCACTATACGGATGTACATCTCGGCACAGTAGAGAACTTGTTCTTGTATACGAATACATTCCTAATGGAACCGTTGCTGATCACCTTCATGGTAAAAAAGCAAAGTCTGGCACATTGCCTTGGCATATCAGAATGAACATTGCCATAGAGACTGCAAATGCGTTGGTGTATCTCCATGCTTCTGAAATCATTCACAGAGACGTGAAAACCAATAACCTTCTCCTTGACAATCACTTCAGTGTCAAAGTAGCAGATTTTGGCCTCTCACGTCTCGTCCCAACCCATGCCACACACATTTCCACTGCTCCACAAGGCACTCCAGGTTATGTGGATCCAGAGTACAACGAGTACTACCAACTCACCGATAAAAGTGATGTTTATAGCTTTGGGGTAGTGTTGATTGAGCTTATATCATCCATGCCTGCGGTTGATATCTCAAGGCGTAGGCATGAGATAAACTTGTCCAACATGGCCATTAAAAAGATTCAAAGTGGGGCATTGCATGAGATTGTGGACCCTACTCTTGACTTTCAGTCAGACTTCAAGGTAAGGAAAATGATCAATGCTGTGGCTGAGTTAGCTTTTCAGTGCTTGCAGGGTTCCAAAGATGTGAGACCTTCTATGGCTGAAGTGTTGAATAGGCTAGAGGATATAAGAAGTGATGGGAAATATAGGAGCAAGCCTGAGGTGTTGGATATCTCAAAAGATAACGCTGCTTTGCTCAAGAATGAACCACCTCCACCTTCACCTGACTCAAATTTGGTCACCATTTCTACACGACTAAATTGTAGCCAGTAATTTAAACTACTGGGTGTACATAGAATGATAAGAGCTCATTTGATTTTTTAAGTGAAGCCTTTTCAATAATTTTTTTATTGTTCATTCTTTTATACATGTCCTTAACAACATTAGTAACATGGACAATTTATGGTTAACAAGGAAGTCATTTGGTTAGCGATGAGGACATGTTTTTAAATTTATAAGGGGTAAAAAACATGAATTGTCTCTTCTCTTTGTTATAGAATGTTTTTGGAAAAGTCTCAAAGAGTTATGCCTAGCTTCGTTTATGGCT 2332 0.4087 MANLLKNDYDNVPITLFLTSTFLLWIASISGQENAAQVECDKPFSCGQVSIYYPFWGGERPSYCASNQQLKLNCEGNQNTTIKLGSQSFQVLHFADPVRYTLTMVRTGLVYDNCSSSALTNTSLDSSLFSYNQNVTNITIFYGCPNSVIANSTRSFPCKEGGDKGAFYGDPSTRKVQDCEGPRIQVQVKQKYVPEGGIQELNKALSEGFEVRLISEAQFQQCLGCVLTNGSCGANDQSQFSCFCQDGTEGLDCSHHSNKWNWKRKLGIGVSAAVVSAIAVSIGFYIYYSCQKKKNHLHAVSSSILSKGIPYSSSLEDPEGCNYFGVHFFTYSELEEATNFFDPARELGDGGFGKVYFGKLQDGRLVAVKRMYENSCRRVEQFVNEVEILTGLHHQNLVSLYGCTSRHSRELVLVYEYIPNGTVADHLHGKKAKSGTLPWHIRMNIAIETANALVYLHASEIIHRDVKTNNLLLDNHFSVKVADFGLSRLVPTHATHISTAPQGTPGYVDPEYNEYYQLTDKSDVYSFGVVLIELISSMPAVDISRRRHEINLSNMAIKKIQSGALHEIVDPTLDFQSDFKVRKMINAVAELAFQCLQGSKDVRPSMAEVLNRLEDIRSDGKYRSKPEVLDISKDNAALLKNEPPPPSPDSNLVTISTRLNCSQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02534 663 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 651 IPR044652 GO:0004672
Pste3g02534 663 Gene3D Phosphorylase Kinase; domain 1 313 417 - -
Pste3g02534 663 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pste3g02534 663 Pfam Wall-associated receptor kinase galacturonan-binding 40 94 IPR025287 GO:0030247
Pste3g02534 663 ProSitePatterns EGF-like domain signature 1. 242 253 IPR000742 -
Pste3g02534 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Pste3g02534 663 Pfam Wall-associated receptor kinase C-terminal 175 247 IPR032872 -
Pste3g02534 663 FunFam Wall-associated receptor kinase-like 20 418 625 - -
Pste3g02534 663 ProSiteProfiles Protein kinase domain profile. 341 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02534 663 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02534 663 Gene3D Transferase(Phosphotransferase) domain 1 418 627 - -
Pste3g02534 663 SMART serkin_6 341 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02534 663 SUPERFAMILY Protein kinase-like (PK-like) 324 627 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02534 Pste-Chr3 18194480 18198767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02534 42 650 Receptor kinase-like Gene Family AT1G25390 42.376 2.96e-144 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pste3g02534 Pkinase 4.4e-47 CL0016